RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 Q5VV11 94 aa9.02□□□□□ -0.97
CEACAM3-201ENST00000344550 CRIPTQ9P021 101 aa9.01□□□□□ -0.97
CEACAM3-201ENST00000344550 A8MUN3 132 aa8.98□□□□□ -0.97
CEACAM3-201ENST00000344550 MT1BP07438 61 aa8.97□□□□□ -0.97
CEACAM3-201ENST00000344550 IMUPQ9GZP8 106 aa8.97□□□□□ -0.97
CEACAM3-201ENST00000344550 NDUFC1O43677 76 aa8.94□□□□□ -0.98
CEACAM3-201ENST00000344550 H0YAA0 97 aa8.93□□□□□ -0.98
CEACAM3-201ENST00000344550 KRTAP6-3Q3LI67 103 aa8.93□□□□□ -0.98
CEACAM3-201ENST00000344550 A0A087WVE0 104 aa8.92□□□□□ -0.98
CEACAM3-201ENST00000344550 A6NN06 94 aa8.91□□□□□ -0.98
CEACAM3-201ENST00000344550 MP68P56378 58 aa8.89□□□□□ -0.99
CEACAM3-201ENST00000344550 OCR1Q9BZK8 76 aa8.88□□□□□ -0.99
CEACAM3-201ENST00000344550 LINC00208Q96KT6 92 aa8.87□□□□□ -0.99
CEACAM3-201ENST00000344550 J3QR89 54 aa8.85□□□□□ -0.99
CEACAM3-201ENST00000344550 A0A1B0GV90 55 aa8.83□□□□□ -1
CEACAM3-201ENST00000344550 H3BPC8 53 aa8.82□□□□□ -1
CEACAM3-201ENST00000344550 KRTAP10-5P60370 271 aa8.82□□□□□ -1
CEACAM3-201ENST00000344550 ADM2Q7Z4H4 148 aa8.7□□□□□ -1.02
CEACAM3-201ENST00000344550 SCGB1A1P11684 91 aa8.68□□□□□ -1.02
CEACAM3-201ENST00000344550 DMAC1Q96GE9 116 aa8.65□□□□□ -1.02
CEACAM3-201ENST00000344550 C20orf197Q8N268 126 aa8.64□□□□□ -1.03
CEACAM3-201ENST00000344550 PRO2289Q9P1D8 64 aa8.55□□□□□ -1.04
CEACAM3-201ENST00000344550 R4GN34 69 aa8.54□□□□□ -1.04
CEACAM3-201ENST00000344550 KRTAP5-9P26371 169 aa8.53□□□□□ -1.04
CEACAM3-201ENST00000344550 SMIM20Q8N5G0 67 aa8.53□□□□□ -1.04
CEACAM3-201ENST00000344550 TRAV7A0A075B6U4 112 aa8.52□□□□□ -1.05
CEACAM3-201ENST00000344550 NEBP20929 6669 aa8.52□□□□□ -1.05
CEACAM3-201ENST00000344550 PLAC4Q8WY50 150 aa8.51□□□□□ -1.05
CEACAM3-201ENST00000344550 P0C880 135 aa8.47□□□□□ -1.05
CEACAM3-201ENST00000344550 K7ERU9 68 aa8.46□□□□□ -1.06
CEACAM3-201ENST00000344550 ACYP2P14621 99 aa8.46□□□□□ -1.06
CEACAM3-201ENST00000344550 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
CEACAM3-201ENST00000344550 M0QZ58 72 aa8.42□□□□□ -1.06
CEACAM3-201ENST00000344550 MT1XP80297 61 aa8.41□□□□□ -1.06
CEACAM3-201ENST00000344550 SPTSSBQ8NFR3 76 aa8.41□□□□□ -1.06
CEACAM3-201ENST00000344550 MT-ATP8P03928 68 aa8.4□□□□□ -1.06
CEACAM3-201ENST00000344550 MUC12Q9UKN1 5478 aa8.4□□□□□ -1.06
CEACAM3-201ENST00000344550 KMT2DO14686 5537 aa8.32□□□□□ -1.08
CEACAM3-201ENST00000344550 KRTAP12-2P59991 146 aa8.31□□□□□ -1.08
CEACAM3-201ENST00000344550 PCP4P48539 62 aa8.29□□□□□ -1.08
CEACAM3-201ENST00000344550 CHKB-CPT1BH3BT56 60 aa8.25□□□□□ -1.09
CEACAM3-201ENST00000344550 LINC01554Q52M75 96 aa8.25□□□□□ -1.09
CEACAM3-201ENST00000344550 SPANXA2-OT1Q8N9U9 137 aa8.24□□□□□ -1.09
CEACAM3-201ENST00000344550 KRTAP20-1Q3LI63 56 aa8.23□□□□□ -1.09
CEACAM3-201ENST00000344550 MDN1Q9NU22 5596 aa8.21□□□□□ -1.1
CEACAM3-201ENST00000344550 KRTAP8-1Q8IUC2 63 aa8.18□□□□□ -1.1
CEACAM3-201ENST00000344550 SPRR2FQ96RM1 72 aa8.18□□□□□ -1.1
CEACAM3-201ENST00000344550 SNURFQ9Y675 71 aa8.18□□□□□ -1.1
CEACAM3-201ENST00000344550 SERP2Q8N6R1 65 aa8.15□□□□□ -1.1
CEACAM3-201ENST00000344550 KRTAP2-3P0C7H8 128 aa8.07□□□□□ -1.12
CEACAM3-201ENST00000344550 SPRR2EP22531 72 aa8.07□□□□□ -1.12
CEACAM3-201ENST00000344550 SPRR2BP35325 72 aa8.07□□□□□ -1.12
CEACAM3-201ENST00000344550 SPRR2AP35326 72 aa8.07□□□□□ -1.12
CEACAM3-201ENST00000344550 KRTAP2-4Q9BYR9 128 aa8.07□□□□□ -1.12
CEACAM3-201ENST00000344550 KRTAP10-12P60413 245 aa8.04□□□□□ -1.12
CEACAM3-201ENST00000344550 KRTAP4-8A0A0G2JLE6 195 aa7.99□□□□□ -1.13
CEACAM3-201ENST00000344550 LCE1AQ5T7P2 110 aa7.99□□□□□ -1.13
CEACAM3-201ENST00000344550 KRTAP4-8Q9BYQ9 185 aa7.99□□□□□ -1.13
CEACAM3-201ENST00000344550 KRTAP10-7P60409 375 aaPredicted RBP7.98□□□□□ -1.13
CEACAM3-201ENST00000344550 COA5Q86WW8 74 aa7.91□□□□□ -1.14
CEACAM3-201ENST00000344550 KRTAP13-4Q3LI77 160 aa7.88□□□□□ -1.15
CEACAM3-201ENST00000344550 COX7CP15954 63 aa7.87□□□□□ -1.15
CEACAM3-201ENST00000344550 SEC61GP60059 68 aa7.87□□□□□ -1.15
CEACAM3-201ENST00000344550 SERP1Q9Y6X1 66 aa7.84□□□□□ -1.15
CEACAM3-201ENST00000344550 CAMK2N1Q7Z7J9 78 aa7.83□□□□□ -1.16
CEACAM3-201ENST00000344550 SPRR2DP22532 72 aa7.81□□□□□ -1.16
CEACAM3-201ENST00000344550 KRTAP2-2Q9BYT5 123 aa7.81□□□□□ -1.16
CEACAM3-201ENST00000344550 KRTAP2-1Q9BYU5 128 aa7.81□□□□□ -1.16
CEACAM3-201ENST00000344550 H7BZZ5 65 aa7.75□□□□□ -1.17
CEACAM3-201ENST00000344550 A0A1B0GU33 70 aa7.7□□□□□ -1.18
CEACAM3-201ENST00000344550 A0A0D9SG42 100 aa7.63□□□□□ -1.19
CEACAM3-201ENST00000344550 ANAPC13Q9BS18 74 aa7.63□□□□□ -1.19
CEACAM3-201ENST00000344550 CYSTM1Q9H1C7 97 aa7.63□□□□□ -1.19
CEACAM3-201ENST00000344550 SVIPQ8NHG7 77 aa7.62□□□□□ -1.19
CEACAM3-201ENST00000344550 LCE3BQ5TA77 95 aa7.61□□□□□ -1.19
CEACAM3-201ENST00000344550 SPATA8Q6RVD6 105 aa7.61□□□□□ -1.19
CEACAM3-201ENST00000344550 SPINT4Q6UDR6 99 aa7.56□□□□□ -1.2
CEACAM3-201ENST00000344550 A0A1B0GU69 56 aa7.54□□□□□ -1.2
CEACAM3-201ENST00000344550 KRTAP12-1P59990 96 aa7.54□□□□□ -1.2
CEACAM3-201ENST00000344550 SMIM26A0A096LP01 95 aa7.53□□□□□ -1.2
CEACAM3-201ENST00000344550 KRTAP19-7Q3SYF9 63 aa7.52□□□□□ -1.21
CEACAM3-201ENST00000344550 LCE5AQ5TCM9 118 aa7.47□□□□□ -1.21
CEACAM3-201ENST00000344550 MT1EP04732 61 aa7.46□□□□□ -1.22
CEACAM3-201ENST00000344550 ATP5EP56381 51 aaPredicted RBP7.43□□□□□ -1.22
CEACAM3-201ENST00000344550 KRTAP19-3Q7Z4W3 81 aa7.43□□□□□ -1.22
CEACAM3-201ENST00000344550 CCDC179H3BU77 68 aa7.42□□□□□ -1.22
CEACAM3-201ENST00000344550 PRR15LQ9BU68 103 aa7.37□□□□□ -1.23
CEACAM3-201ENST00000344550 DSTQ03001 7570 aaKnown RBP7.32□□□□□ -1.24
CEACAM3-201ENST00000344550 A8MU10 97 aa7.31□□□□□ -1.24
CEACAM3-201ENST00000344550 MT1GP13640 62 aa7.3□□□□□ -1.24
CEACAM3-201ENST00000344550 KRTAP19-5Q3LI72 72 aa7.29□□□□□ -1.24
CEACAM3-201ENST00000344550 RPS28P62857 69 aaKnown RBP7.28□□□□□ -1.24
CEACAM3-201ENST00000344550 TNP1P09430 55 aa7.26□□□□□ -1.25
CEACAM3-201ENST00000344550 PP632Q6XCG6 107 aa7.26□□□□□ -1.25
CEACAM3-201ENST00000344550 TMEM258P61165 79 aa7.25□□□□□ -1.25
CEACAM3-201ENST00000344550 LINC01558Q9Y6Z2 57 aa7.24□□□□□ -1.25
CEACAM3-201ENST00000344550 C10orf95Q9H7T3 257 aa7.19□□□□□ -1.26
CEACAM3-201ENST00000344550 MT1LQ93083 61 aa7.13□□□□□ -1.27
CEACAM3-201ENST00000344550 LCE3AQ5TA76 89 aa7.12□□□□□ -1.27
CEACAM3-201ENST00000344550 UQCR11O14957 56 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms