RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 RYR2Q92736 4967 aa8.01□□□□□ -1.13
SNX18-202ENST00000343017 RPL37P61927 97 aaKnown RBP7.96□□□□□ -1.14
SNX18-202ENST00000343017 KRTAP10-6P60371 365 aaPredicted RBP7.94□□□□□ -1.14
SNX18-202ENST00000343017 A0A1B0GVY2 172 aa7.92□□□□□ -1.14
SNX18-202ENST00000343017 APOBP04114 4563 aaKnown RBP7.92□□□□□ -1.14
SNX18-202ENST00000343017 RYR3Q15413 4870 aa7.89□□□□□ -1.15
SNX18-202ENST00000343017 NDUFAF8A1L188 74 aa7.88□□□□□ -1.15
SNX18-202ENST00000343017 RPS29P62273 56 aaKnown RBP7.88□□□□□ -1.15
SNX18-202ENST00000343017 KRTAP3-3Q9BYR6 98 aa7.87□□□□□ -1.15
SNX18-202ENST00000343017 KRTAP3-2Q9BYR7 98 aa7.85□□□□□ -1.15
SNX18-202ENST00000343017 LRP1Q07954 4544 aaKnown RBP7.82□□□□□ -1.16
SNX18-202ENST00000343017 KRTAP15-1Q3LI76 137 aa7.79□□□□□ -1.16
SNX18-202ENST00000343017 PKHD1L1Q86WI1 4243 aa7.79□□□□□ -1.16
SNX18-202ENST00000343017 KRTAP12-2P59991 146 aa7.77□□□□□ -1.17
SNX18-202ENST00000343017 KIAA1109Q2LD37 5005 aa7.77□□□□□ -1.17
SNX18-202ENST00000343017 KRTAP10-8P60410 259 aa7.75□□□□□ -1.17
SNX18-202ENST00000343017 HSPG2P98160 4391 aa7.75□□□□□ -1.17
SNX18-202ENST00000343017 S4R3F8 94 aa7.75□□□□□ -1.17
SNX18-202ENST00000343017 KRTAP10-4P60372 401 aaPredicted RBP7.74□□□□□ -1.17
SNX18-202ENST00000343017 MYCBP2O75592 4640 aa7.73□□□□□ -1.17
SNX18-202ENST00000343017 Q5VSD8 79 aa7.73□□□□□ -1.17
SNX18-202ENST00000343017 EPPK1P58107 5090 aaKnown RBP7.65□□□□□ -1.19
SNX18-202ENST00000343017 FAT3Q8TDW7 4589 aa7.64□□□□□ -1.19
SNX18-202ENST00000343017 KRTAP17-1Q9BYP8 105 aa7.63□□□□□ -1.19
SNX18-202ENST00000343017 RYR1P21817 5038 aa7.63□□□□□ -1.19
SNX18-202ENST00000343017 KRTAP12-1P59990 96 aa7.62□□□□□ -1.19
SNX18-202ENST00000343017 A0A0A0MQY5 61 aa7.53□□□□□ -1.2
SNX18-202ENST00000343017 XP32Q5T750 250 aa7.52□□□□□ -1.21
SNX18-202ENST00000343017 LPAP08519 4548 aa7.51□□□□□ -1.21
SNX18-202ENST00000343017 TNXBP22105 4242 aa7.5□□□□□ -1.21
SNX18-202ENST00000343017 KRTAP4-5Q9BYR2 181 aa7.42□□□□□ -1.22
SNX18-202ENST00000343017 MT1HL1P0DM35 61 aa7.35□□□□□ -1.23
SNX18-202ENST00000343017 LRP2P98164 4655 aa7.33□□□□□ -1.24
SNX18-202ENST00000343017 M0QZ58 72 aa7.33□□□□□ -1.24
SNX18-202ENST00000343017 ABCA13Q86UQ4 5058 aa7.32□□□□□ -1.24
SNX18-202ENST00000343017 PLAC4Q8WY50 150 aa7.27□□□□□ -1.25
SNX18-202ENST00000343017 HERC2O95714 4834 aa7.23□□□□□ -1.25
SNX18-202ENST00000343017 J3QL48 77 aa7.21□□□□□ -1.25
SNX18-202ENST00000343017 R4GN34 69 aa7.21□□□□□ -1.26
SNX18-202ENST00000343017 LUZP6Q538Z0 58 aa7.19□□□□□ -1.26
SNX18-202ENST00000343017 LORP23490 312 aaPredicted RBP7.18□□□□□ -1.26
SNX18-202ENST00000343017 BIRC6Q9NR09 4857 aa7.03□□□□□ -1.28
SNX18-202ENST00000343017 HERC1Q15751 4861 aa7.01□□□□□ -1.29
SNX18-202ENST00000343017 MUC2Q02817 5179 aa6.98□□□□□ -1.29
SNX18-202ENST00000343017 PCLOQ9Y6V0 5065 aa6.94□□□□□ -1.3
SNX18-202ENST00000343017 CAMK2N1Q7Z7J9 78 aa6.92□□□□□ -1.3
SNX18-202ENST00000343017 SEC61BP60468 96 aaKnown RBP6.87□□□□□ -1.31
SNX18-202ENST00000343017 KRTAP4-1Q9BYQ7 146 aa6.84□□□□□ -1.31
SNX18-202ENST00000343017 MUC17Q685J3 4493 aa6.84□□□□□ -1.31
SNX18-202ENST00000343017 PP632Q6XCG6 107 aa6.83□□□□□ -1.32
SNX18-202ENST00000343017 RNF213Q63HN8 5207 aa6.7□□□□□ -1.34
SNX18-202ENST00000343017 HMCN2Q8NDA2 5059 aa6.68□□□□□ -1.34
SNX18-202ENST00000343017 FAT4Q6V0I7 4981 aa6.65□□□□□ -1.34
SNX18-202ENST00000343017 UBR4Q5T4S7 5183 aa6.62□□□□□ -1.35
SNX18-202ENST00000343017 TNP1P09430 55 aa6.62□□□□□ -1.35
SNX18-202ENST00000343017 KRTAP19-2Q3LHN2 52 aa6.61□□□□□ -1.35
SNX18-202ENST00000343017 SPRR5A0A1B0GTR4 108 aa6.58□□□□□ -1.36
SNX18-202ENST00000343017 FLGP20930 4061 aaPredicted RBP6.46□□□□□ -1.37
SNX18-202ENST00000343017 M0R2T5 61 aa6.45□□□□□ -1.38
SNX18-202ENST00000343017 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.38
SNX18-202ENST00000343017 LCE3AQ5TA76 89 aa6.33□□□□□ -1.4
SNX18-202ENST00000343017 LCE2CQ5TA81 110 aa6.29□□□□□ -1.4
SNX18-202ENST00000343017 PRO2289Q9P1D8 64 aa6.25□□□□□ -1.41
SNX18-202ENST00000343017 KRTAP19-1Q8IUB9 90 aa6.2□□□□□ -1.42
SNX18-202ENST00000343017 MT1HP80294 61 aa6.19□□□□□ -1.42
SNX18-202ENST00000343017 KRTAP10-10P60014 251 aa6.15□□□□□ -1.43
SNX18-202ENST00000343017 SPRR2GQ9BYE4 73 aa6.14□□□□□ -1.43
SNX18-202ENST00000343017 INE1O15225 51 aa6.05□□□□□ -1.44
SNX18-202ENST00000343017 MT1FP04733 61 aa6.05□□□□□ -1.44
SNX18-202ENST00000343017 MT2AP02795 61 aa6.03□□□□□ -1.44
SNX18-202ENST00000343017 KRTAP8-1Q8IUC2 63 aa6.03□□□□□ -1.44
SNX18-202ENST00000343017 KRTAP9-8Q9BYQ0 159 aa5.96□□□□□ -1.45
SNX18-202ENST00000343017 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
SNX18-202ENST00000343017 USH2AO75445 5202 aa5.94□□□□□ -1.46
SNX18-202ENST00000343017 KRTAP10-12P60413 245 aa5.9□□□□□ -1.46
SNX18-202ENST00000343017 FSIP2Q5CZC0 6907 aa5.9□□□□□ -1.47
SNX18-202ENST00000343017 KRTAP10-5P60370 271 aa5.89□□□□□ -1.47
SNX18-202ENST00000343017 MT1XP80297 61 aa5.87□□□□□ -1.47
SNX18-202ENST00000343017 KRTAP10-7P60409 375 aaPredicted RBP5.83□□□□□ -1.48
SNX18-202ENST00000343017 MT1BP07438 61 aa5.81□□□□□ -1.48
SNX18-202ENST00000343017 KRTAP19-8Q3LI54 63 aa5.77□□□□□ -1.49
SNX18-202ENST00000343017 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
SNX18-202ENST00000343017 KMT2DO14686 5537 aa5.71□□□□□ -1.5
SNX18-202ENST00000343017 KRTAP19-5Q3LI72 72 aa5.62□□□□□ -1.51
SNX18-202ENST00000343017 LCE2BO14633 110 aa5.61□□□□□ -1.51
SNX18-202ENST00000343017 LCE2AQ5TA79 106 aaPredicted RBP5.61□□□□□ -1.51
SNX18-202ENST00000343017 LCE3CQ5T5A8 94 aa5.61□□□□□ -1.51
SNX18-202ENST00000343017 KRTAP9-6A8MVA2 160 aa5.57□□□□□ -1.52
SNX18-202ENST00000343017 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.53
SNX18-202ENST00000343017 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.54
SNX18-202ENST00000343017 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
SNX18-202ENST00000343017 SSPOA2VEC9 5147 aa5.37□□□□□ -1.55
SNX18-202ENST00000343017 KRTAP2-3P0C7H8 128 aa5.35□□□□□ -1.55
SNX18-202ENST00000343017 KRTAP2-4Q9BYR9 128 aa5.35□□□□□ -1.55
SNX18-202ENST00000343017 KRTAP2-1Q9BYU5 128 aa5.35□□□□□ -1.55
SNX18-202ENST00000343017 KRTAP19-7Q3SYF9 63 aa5.23□□□□□ -1.57
SNX18-202ENST00000343017 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.6
SNX18-202ENST00000343017 MT1LQ93083 61 aa5.08□□□□□ -1.6
SNX18-202ENST00000343017 FCGBPQ9Y6R7 5405 aaPredicted RBP5.08□□□□□ -1.6
SNX18-202ENST00000343017 MUC12Q9UKN1 5478 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms