RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 FAM236BA0A1B0GV22 79 aa7.27□□□□□ -1.25
TNFRSF12A-202ENST00000341627 KLKP1Q107X0 134 aa7.27□□□□□ -1.25
TNFRSF12A-202ENST00000341627 SMIM20Q8N5G0 67 aa7.27□□□□□ -1.25
TNFRSF12A-202ENST00000341627 A8MUN3 132 aa7.25□□□□□ -1.25
TNFRSF12A-202ENST00000341627 TRAV7A0A075B6U4 112 aa7.22□□□□□ -1.25
TNFRSF12A-202ENST00000341627 FCGBPQ9Y6R7 5405 aaPredicted RBP7.2□□□□□ -1.26
TNFRSF12A-202ENST00000341627 KRTAP3-3Q9BYR6 98 aa7.18□□□□□ -1.26
TNFRSF12A-202ENST00000341627 NDUFC1O43677 76 aa7.16□□□□□ -1.26
TNFRSF12A-202ENST00000341627 KRTAP19-1Q8IUB9 90 aa7.14□□□□□ -1.27
TNFRSF12A-202ENST00000341627 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.11□□□□□ -1.27
TNFRSF12A-202ENST00000341627 DMAC1Q96GE9 116 aa7.1□□□□□ -1.27
TNFRSF12A-202ENST00000341627 SERP2Q8N6R1 65 aa7.06□□□□□ -1.28
TNFRSF12A-202ENST00000341627 SNURFQ9Y675 71 aa7.03□□□□□ -1.28
TNFRSF12A-202ENST00000341627 KRTAP19-6Q3LI70 58 aa7.02□□□□□ -1.29
TNFRSF12A-202ENST00000341627 H0YAA0 97 aa7.01□□□□□ -1.29
TNFRSF12A-202ENST00000341627 C20orf197Q8N268 126 aa7.01□□□□□ -1.29
TNFRSF12A-202ENST00000341627 KRTAP9-7A8MTY7 169 aa7□□□□□ -1.29
TNFRSF12A-202ENST00000341627 ACYP2P14621 99 aa7□□□□□ -1.29
TNFRSF12A-202ENST00000341627 CRIPTQ9P021 101 aa6.98□□□□□ -1.29
TNFRSF12A-202ENST00000341627 SPRR2GQ9BYE4 73 aa6.96□□□□□ -1.3
TNFRSF12A-202ENST00000341627 ADM2Q7Z4H4 148 aa6.94□□□□□ -1.3
TNFRSF12A-202ENST00000341627 PCP4P48539 62 aa6.93□□□□□ -1.3
TNFRSF12A-202ENST00000341627 SPANXA2-OT1Q8N9U9 137 aa6.93□□□□□ -1.3
TNFRSF12A-202ENST00000341627 COX7CP15954 63 aa6.91□□□□□ -1.3
TNFRSF12A-202ENST00000341627 MACF1Q9UPN3 7388 aaKnown RBP6.9□□□□□ -1.3
TNFRSF12A-202ENST00000341627 SPTSSBQ8NFR3 76 aa6.9□□□□□ -1.3
TNFRSF12A-202ENST00000341627 CHKB-CPT1BH3BT56 60 aa6.89□□□□□ -1.31
TNFRSF12A-202ENST00000341627 Q5VV11 94 aa6.88□□□□□ -1.31
TNFRSF12A-202ENST00000341627 KRTAP19-8Q3LI54 63 aa6.87□□□□□ -1.31
TNFRSF12A-202ENST00000341627 SYNE2Q8WXH0 6885 aaKnown RBP6.86□□□□□ -1.31
TNFRSF12A-202ENST00000341627 MT1BP07438 61 aa6.82□□□□□ -1.32
TNFRSF12A-202ENST00000341627 ANAPC13Q9BS18 74 aa6.8□□□□□ -1.32
TNFRSF12A-202ENST00000341627 P0C880 135 aa6.79□□□□□ -1.32
TNFRSF12A-202ENST00000341627 R4GN34 69 aa6.77□□□□□ -1.33
TNFRSF12A-202ENST00000341627 KRTAP3-2Q9BYR7 98 aa6.76□□□□□ -1.33
TNFRSF12A-202ENST00000341627 H7BZZ5 65 aa6.73□□□□□ -1.33
TNFRSF12A-202ENST00000341627 M0QZ58 72 aa6.72□□□□□ -1.33
TNFRSF12A-202ENST00000341627 COA5Q86WW8 74 aa6.71□□□□□ -1.34
TNFRSF12A-202ENST00000341627 CYSTM1Q9H1C7 97 aa6.71□□□□□ -1.34
TNFRSF12A-202ENST00000341627 A6NN06 94 aa6.7□□□□□ -1.34
TNFRSF12A-202ENST00000341627 KRTAP6-3Q3LI67 103 aa6.66□□□□□ -1.34
TNFRSF12A-202ENST00000341627 KRTAP10-5P60370 271 aa6.63□□□□□ -1.35
TNFRSF12A-202ENST00000341627 PLAC4Q8WY50 150 aa6.63□□□□□ -1.35
TNFRSF12A-202ENST00000341627 CCDC179H3BU77 68 aa6.62□□□□□ -1.35
TNFRSF12A-202ENST00000341627 LINC01554Q52M75 96 aa6.6□□□□□ -1.35
TNFRSF12A-202ENST00000341627 SEC61GP60059 68 aa6.56□□□□□ -1.36
TNFRSF12A-202ENST00000341627 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
TNFRSF12A-202ENST00000341627 SERP1Q9Y6X1 66 aa6.53□□□□□ -1.36
TNFRSF12A-202ENST00000341627 ATP5EP56381 51 aaPredicted RBP6.52□□□□□ -1.37
TNFRSF12A-202ENST00000341627 MUC12Q9UKN1 5478 aa6.5□□□□□ -1.37
TNFRSF12A-202ENST00000341627 NEBP20929 6669 aa6.47□□□□□ -1.37
TNFRSF12A-202ENST00000341627 MT1XP80297 61 aa6.45□□□□□ -1.38
TNFRSF12A-202ENST00000341627 TMEM258P61165 79 aa6.42□□□□□ -1.38
TNFRSF12A-202ENST00000341627 KRTAP13-4Q3LI77 160 aa6.42□□□□□ -1.38
TNFRSF12A-202ENST00000341627 KMT2DO14686 5537 aa6.39□□□□□ -1.39
TNFRSF12A-202ENST00000341627 A0A1B0GU69 56 aa6.39□□□□□ -1.39
TNFRSF12A-202ENST00000341627 A0A1B0GU33 70 aa6.38□□□□□ -1.39
TNFRSF12A-202ENST00000341627 KRTAP5-9P26371 169 aa6.37□□□□□ -1.39
TNFRSF12A-202ENST00000341627 MDN1Q9NU22 5596 aa6.34□□□□□ -1.39
TNFRSF12A-202ENST00000341627 SPATA8Q6RVD6 105 aa6.31□□□□□ -1.4
TNFRSF12A-202ENST00000341627 PRR15LQ9BU68 103 aa6.3□□□□□ -1.4
TNFRSF12A-202ENST00000341627 A0A0D9SG42 100 aa6.29□□□□□ -1.4
TNFRSF12A-202ENST00000341627 KRTAP12-2P59991 146 aa6.27□□□□□ -1.41
TNFRSF12A-202ENST00000341627 CAMK2N1Q7Z7J9 78 aa6.27□□□□□ -1.41
TNFRSF12A-202ENST00000341627 LINC01558Q9Y6Z2 57 aa6.24□□□□□ -1.41
TNFRSF12A-202ENST00000341627 SMIM26A0A096LP01 95 aa6.22□□□□□ -1.41
TNFRSF12A-202ENST00000341627 RPS28P62857 69 aaKnown RBP6.21□□□□□ -1.42
TNFRSF12A-202ENST00000341627 SPINT4Q6UDR6 99 aa6.21□□□□□ -1.42
TNFRSF12A-202ENST00000341627 KRTAP10-7P60409 375 aaPredicted RBP6.16□□□□□ -1.42
TNFRSF12A-202ENST00000341627 KRTAP12-1P59990 96 aa6.15□□□□□ -1.42
TNFRSF12A-202ENST00000341627 KRTAP8-1Q8IUC2 63 aa6.15□□□□□ -1.42
TNFRSF12A-202ENST00000341627 SPRR2FQ96RM1 72 aa6.15□□□□□ -1.42
TNFRSF12A-202ENST00000341627 KRTAP10-12P60413 245 aa6.14□□□□□ -1.43
TNFRSF12A-202ENST00000341627 KRTAP20-1Q3LI63 56 aa6.13□□□□□ -1.43
TNFRSF12A-202ENST00000341627 A8MU10 97 aa6.12□□□□□ -1.43
TNFRSF12A-202ENST00000341627 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
TNFRSF12A-202ENST00000341627 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
TNFRSF12A-202ENST00000341627 UQCR11O14957 56 aa6.07□□□□□ -1.44
TNFRSF12A-202ENST00000341627 V9GYY9 64 aa6.06□□□□□ -1.44
TNFRSF12A-202ENST00000341627 SPRR2EP22531 72 aa6.05□□□□□ -1.44
TNFRSF12A-202ENST00000341627 SPRR2BP35325 72 aa6.05□□□□□ -1.44
TNFRSF12A-202ENST00000341627 SPRR2AP35326 72 aa6.05□□□□□ -1.44
TNFRSF12A-202ENST00000341627 LCE1AQ5T7P2 110 aa6.02□□□□□ -1.45
TNFRSF12A-202ENST00000341627 KRTAP2-3P0C7H8 128 aa5.99□□□□□ -1.45
TNFRSF12A-202ENST00000341627 Q1T7F1 81 aa5.99□□□□□ -1.45
TNFRSF12A-202ENST00000341627 KRTAP2-4Q9BYR9 128 aa5.99□□□□□ -1.45
TNFRSF12A-202ENST00000341627 PSPHP1O15172 72 aa5.95□□□□□ -1.46
TNFRSF12A-202ENST00000341627 MIR22HGQ0VDD5 57 aa5.94□□□□□ -1.46
TNFRSF12A-202ENST00000341627 C10orf95Q9H7T3 257 aa5.86□□□□□ -1.47
TNFRSF12A-202ENST00000341627 TNP1P09430 55 aa5.85□□□□□ -1.47
TNFRSF12A-202ENST00000341627 SPRR2DP22532 72 aa5.85□□□□□ -1.47
TNFRSF12A-202ENST00000341627 K7ERS5 55 aa5.84□□□□□ -1.47
TNFRSF12A-202ENST00000341627 KRTAP2-2Q9BYT5 123 aa5.81□□□□□ -1.48
TNFRSF12A-202ENST00000341627 KRTAP2-1Q9BYU5 128 aa5.81□□□□□ -1.48
TNFRSF12A-202ENST00000341627 A6NED7 52 aa5.79□□□□□ -1.48
TNFRSF12A-202ENST00000341627 KRTAP19-7Q3SYF9 63 aa5.76□□□□□ -1.49
TNFRSF12A-202ENST00000341627 MT1EP04732 61 aa5.71□□□□□ -1.5
TNFRSF12A-202ENST00000341627 LCE3BQ5TA77 95 aa5.7□□□□□ -1.5
TNFRSF12A-202ENST00000341627 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
TNFRSF12A-202ENST00000341627 LCE3AQ5TA76 89 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms