RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 J3QL48 77 aa7.94□□□□□ -1.14
MBD1-203ENST00000339998 HERC1Q15751 4861 aa7.93□□□□□ -1.14
MBD1-203ENST00000339998 TPRXLQ17RH7 258 aa7.92□□□□□ -1.14
MBD1-203ENST00000339998 SPTSSBQ8NFR3 76 aa7.89□□□□□ -1.15
MBD1-203ENST00000339998 MUC2Q02817 5179 aa7.88□□□□□ -1.15
MBD1-203ENST00000339998 CDC42SE1Q9NRR8 79 aa7.82□□□□□ -1.16
MBD1-203ENST00000339998 KRTAP3-3Q9BYR6 98 aa7.81□□□□□ -1.16
MBD1-203ENST00000339998 MUC17Q685J3 4493 aa7.77□□□□□ -1.17
MBD1-203ENST00000339998 SEC61GP60059 68 aa7.76□□□□□ -1.17
MBD1-203ENST00000339998 KRTAP4-1Q9BYQ7 146 aa7.74□□□□□ -1.17
MBD1-203ENST00000339998 PMAIP1Q13794 54 aa7.74□□□□□ -1.17
MBD1-203ENST00000339998 UQCR11O14957 56 aa7.73□□□□□ -1.17
MBD1-203ENST00000339998 S4R3F8 94 aa7.73□□□□□ -1.17
MBD1-203ENST00000339998 MIR22HGQ0VDD5 57 aa7.72□□□□□ -1.17
MBD1-203ENST00000339998 H1FX-AS1Q4G0G2 97 aa7.68□□□□□ -1.18
MBD1-203ENST00000339998 SPATA8Q6RVD6 105 aa7.68□□□□□ -1.18
MBD1-203ENST00000339998 HMCN2Q8NDA2 5059 aa7.66□□□□□ -1.18
MBD1-203ENST00000339998 H0YAA0 97 aa7.65□□□□□ -1.18
MBD1-203ENST00000339998 A0A1B0GU33 70 aa7.64□□□□□ -1.19
MBD1-203ENST00000339998 RBM12B-AS1Q9P1G2 102 aa7.64□□□□□ -1.19
MBD1-203ENST00000339998 SEC61BP60468 96 aaKnown RBP7.62□□□□□ -1.19
MBD1-203ENST00000339998 KRTAP10-6P60371 365 aaPredicted RBP7.62□□□□□ -1.19
MBD1-203ENST00000339998 A6NN06 94 aa7.6□□□□□ -1.19
MBD1-203ENST00000339998 KRTAP3-2Q9BYR7 98 aa7.59□□□□□ -1.19
MBD1-203ENST00000339998 P0C880 135 aa7.59□□□□□ -1.19
MBD1-203ENST00000339998 KRTAP13-4Q3LI77 160 aa7.55□□□□□ -1.2
MBD1-203ENST00000339998 RNF213Q63HN8 5207 aa7.53□□□□□ -1.2
MBD1-203ENST00000339998 ADM2Q7Z4H4 148 aa7.52□□□□□ -1.21
MBD1-203ENST00000339998 FAT4Q6V0I7 4981 aa7.51□□□□□ -1.21
MBD1-203ENST00000339998 UBR4Q5T4S7 5183 aa7.5□□□□□ -1.21
MBD1-203ENST00000339998 CSAG1Q6PB30 78 aa7.49□□□□□ -1.21
MBD1-203ENST00000339998 A0A0D9SG42 100 aa7.48□□□□□ -1.21
MBD1-203ENST00000339998 KRTAP19-2Q3LHN2 52 aa7.46□□□□□ -1.22
MBD1-203ENST00000339998 KTN1-AS1Q86SY8 53 aa7.4□□□□□ -1.23
MBD1-203ENST00000339998 PRAC1Q96KF2 57 aa7.39□□□□□ -1.23
MBD1-203ENST00000339998 FLGP20930 4061 aaPredicted RBP7.36□□□□□ -1.23
MBD1-203ENST00000339998 LORP23490 312 aaPredicted RBP7.33□□□□□ -1.24
MBD1-203ENST00000339998 LINC01554Q52M75 96 aa7.26□□□□□ -1.25
MBD1-203ENST00000339998 KRTAP12-2P59991 146 aa7.24□□□□□ -1.25
MBD1-203ENST00000339998 M0QZ58 72 aa7.22□□□□□ -1.25
MBD1-203ENST00000339998 SPINT4Q6UDR6 99 aa7.22□□□□□ -1.25
MBD1-203ENST00000339998 CRIPTQ9P021 101 aa7.21□□□□□ -1.26
MBD1-203ENST00000339998 LCE2CQ5TA81 110 aa7.19□□□□□ -1.26
MBD1-203ENST00000339998 R4GN34 69 aa7.18□□□□□ -1.26
MBD1-203ENST00000339998 K7ERS5 55 aa7.18□□□□□ -1.26
MBD1-203ENST00000339998 KRTAP12-1P59990 96 aa7.17□□□□□ -1.26
MBD1-203ENST00000339998 M0R2T5 61 aa7.03□□□□□ -1.28
MBD1-203ENST00000339998 ROMO1P60602 79 aa7.02□□□□□ -1.28
MBD1-203ENST00000339998 MT1HP80294 61 aa7.01□□□□□ -1.29
MBD1-203ENST00000339998 C10orf95Q9H7T3 257 aa6.96□□□□□ -1.3
MBD1-203ENST00000339998 H3BS24 57 aa6.93□□□□□ -1.3
MBD1-203ENST00000339998 KRTAP25-1Q3LHN0 102 aa6.91□□□□□ -1.3
MBD1-203ENST00000339998 MT1FP04733 61 aa6.82□□□□□ -1.32
MBD1-203ENST00000339998 MT2AP02795 61 aa6.81□□□□□ -1.32
MBD1-203ENST00000339998 KRTAP10-10P60014 251 aa6.79□□□□□ -1.32
MBD1-203ENST00000339998 KRTAP9-8Q9BYQ0 159 aa6.79□□□□□ -1.32
MBD1-203ENST00000339998 CAMK2N1Q7Z7J9 78 aa6.78□□□□□ -1.32
MBD1-203ENST00000339998 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
MBD1-203ENST00000339998 SPRR2GQ9BYE4 73 aa6.69□□□□□ -1.34
MBD1-203ENST00000339998 USH2AO75445 5202 aa6.59□□□□□ -1.35
MBD1-203ENST00000339998 PLAC4Q8WY50 150 aa6.56□□□□□ -1.36
MBD1-203ENST00000339998 KRTAP9-3Q9BYQ3 159 aa6.51□□□□□ -1.37
MBD1-203ENST00000339998 MT1BP07438 61 aa6.48□□□□□ -1.37
MBD1-203ENST00000339998 LCE2AQ5TA79 106 aaPredicted RBP6.46□□□□□ -1.37
MBD1-203ENST00000339998 KRTAP19-8Q3LI54 63 aa6.45□□□□□ -1.38
MBD1-203ENST00000339998 TNP1P09430 55 aa6.41□□□□□ -1.38
MBD1-203ENST00000339998 LCE2BO14633 110 aa6.38□□□□□ -1.39
MBD1-203ENST00000339998 MT1XP80297 61 aa6.34□□□□□ -1.39
MBD1-203ENST00000339998 KRTAP10-5P60370 271 aa6.34□□□□□ -1.39
MBD1-203ENST00000339998 A0A0A0MQY5 61 aa6.32□□□□□ -1.4
MBD1-203ENST00000339998 FSIP2Q5CZC0 6907 aa6.32□□□□□ -1.4
MBD1-203ENST00000339998 KMT2DO14686 5537 aa6.27□□□□□ -1.41
MBD1-203ENST00000339998 LCE3AQ5TA76 89 aa6.23□□□□□ -1.41
MBD1-203ENST00000339998 PP632Q6XCG6 107 aa6.23□□□□□ -1.41
MBD1-203ENST00000339998 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
MBD1-203ENST00000339998 KRTAP10-7P60409 375 aaPredicted RBP6.2□□□□□ -1.42
MBD1-203ENST00000339998 SSPOA2VEC9 5147 aa6.11□□□□□ -1.43
MBD1-203ENST00000339998 KRTAP23-1A1A580 65 aa6.06□□□□□ -1.44
MBD1-203ENST00000339998 KRTAP10-12P60413 245 aa6.06□□□□□ -1.44
MBD1-203ENST00000339998 PRO2289Q9P1D8 64 aa6.04□□□□□ -1.44
MBD1-203ENST00000339998 NDUFAF8A1L188 74 aa5.99□□□□□ -1.45
MBD1-203ENST00000339998 KRTAP4-8A0A0G2JLE6 195 aa5.98□□□□□ -1.45
MBD1-203ENST00000339998 KRTAP4-8Q9BYQ9 185 aa5.98□□□□□ -1.45
MBD1-203ENST00000339998 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.46
MBD1-203ENST00000339998 KRTAP12-3P60328 96 aa5.9□□□□□ -1.46
MBD1-203ENST00000339998 KRTAP19-5Q3LI72 72 aa5.84□□□□□ -1.48
MBD1-203ENST00000339998 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
MBD1-203ENST00000339998 SPRR5A0A1B0GTR4 108 aa5.73□□□□□ -1.49
MBD1-203ENST00000339998 KRTAP19-6Q3LI70 58 aa5.72□□□□□ -1.49
MBD1-203ENST00000339998 LUZP6Q538Z0 58 aa5.7□□□□□ -1.5
MBD1-203ENST00000339998 KRTAP19-7Q3SYF9 63 aa5.66□□□□□ -1.5
MBD1-203ENST00000339998 MUC12Q9UKN1 5478 aa5.63□□□□□ -1.51
MBD1-203ENST00000339998 LCE2DQ5TA82 110 aaPredicted RBP5.6□□□□□ -1.51
MBD1-203ENST00000339998 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
MBD1-203ENST00000339998 MACF1Q9UPN3 7388 aaKnown RBP5.53□□□□□ -1.52
MBD1-203ENST00000339998 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
MBD1-203ENST00000339998 MT1EP04732 61 aa5.5□□□□□ -1.53
MBD1-203ENST00000339998 SYNE2Q8WXH0 6885 aaKnown RBP5.47□□□□□ -1.53
MBD1-203ENST00000339998 KRTAP9-2Q9BYQ4 174 aa5.44□□□□□ -1.54
MBD1-203ENST00000339998 MT1LQ93083 61 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms