RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 DMBT1Q9UGM3 2413 aaPredicted RBP6.8□□□□□ -1.32
DFFB-202ENST00000339350 RYR2Q92736 4967 aa6.8□□□□□ -1.32
DFFB-202ENST00000339350 C9orf92A6NGG3 77 aa6.8□□□□□ -1.32
DFFB-202ENST00000339350 J3QL48 77 aa6.79□□□□□ -1.32
DFFB-202ENST00000339350 KRTAP21-3Q3LHN1 58 aa6.78□□□□□ -1.32
DFFB-202ENST00000339350 LRP1Q07954 4544 aaKnown RBP6.77□□□□□ -1.33
DFFB-202ENST00000339350 RYR3Q15413 4870 aa6.75□□□□□ -1.33
DFFB-202ENST00000339350 COX6B2Q6YFQ2 88 aa6.75□□□□□ -1.33
DFFB-202ENST00000339350 MYCBP2O75592 4640 aa6.72□□□□□ -1.33
DFFB-202ENST00000339350 RPL37P61927 97 aaKnown RBP6.68□□□□□ -1.34
DFFB-202ENST00000339350 A0A0D9SG42 100 aa6.68□□□□□ -1.34
DFFB-202ENST00000339350 KRTAP3-1Q9BYR8 98 aa6.63□□□□□ -1.35
DFFB-202ENST00000339350 PKHD1L1Q86WI1 4243 aa6.62□□□□□ -1.35
DFFB-202ENST00000339350 KIAA1109Q2LD37 5005 aa6.61□□□□□ -1.35
DFFB-202ENST00000339350 A0A1B0GVY2 172 aa6.59□□□□□ -1.35
DFFB-202ENST00000339350 HSPG2P98160 4391 aa6.57□□□□□ -1.36
DFFB-202ENST00000339350 KRTAP13-4Q3LI77 160 aa6.57□□□□□ -1.36
DFFB-202ENST00000339350 FAT3Q8TDW7 4589 aa6.55□□□□□ -1.36
DFFB-202ENST00000339350 EPPK1P58107 5090 aaKnown RBP6.53□□□□□ -1.36
DFFB-202ENST00000339350 KRTAP10-4P60372 401 aaPredicted RBP6.52□□□□□ -1.37
DFFB-202ENST00000339350 KRTAP17-1Q9BYP8 105 aa6.49□□□□□ -1.37
DFFB-202ENST00000339350 RPS29P62273 56 aaKnown RBP6.49□□□□□ -1.37
DFFB-202ENST00000339350 TNXBP22105 4242 aa6.47□□□□□ -1.37
DFFB-202ENST00000339350 S4R3F8 94 aa6.45□□□□□ -1.38
DFFB-202ENST00000339350 RYR1P21817 5038 aa6.45□□□□□ -1.38
DFFB-202ENST00000339350 KRTAP10-6P60371 365 aaPredicted RBP6.44□□□□□ -1.38
DFFB-202ENST00000339350 CAMK2N1Q7Z7J9 78 aa6.44□□□□□ -1.38
DFFB-202ENST00000339350 KRTAP12-2P59991 146 aa6.42□□□□□ -1.38
DFFB-202ENST00000339350 Q5VSD8 79 aa6.41□□□□□ -1.38
DFFB-202ENST00000339350 KRTAP3-2Q9BYR7 98 aa6.38□□□□□ -1.39
DFFB-202ENST00000339350 LPAP08519 4548 aa6.38□□□□□ -1.39
DFFB-202ENST00000339350 PLAC4Q8WY50 150 aa6.38□□□□□ -1.39
DFFB-202ENST00000339350 XP32Q5T750 250 aa6.37□□□□□ -1.39
DFFB-202ENST00000339350 KRTAP10-8P60410 259 aa6.33□□□□□ -1.4
DFFB-202ENST00000339350 LRP2P98164 4655 aa6.33□□□□□ -1.4
DFFB-202ENST00000339350 ABCA13Q86UQ4 5058 aa6.33□□□□□ -1.4
DFFB-202ENST00000339350 KRTAP3-3Q9BYR6 98 aa6.32□□□□□ -1.4
DFFB-202ENST00000339350 KRTAP12-1P59990 96 aa6.27□□□□□ -1.41
DFFB-202ENST00000339350 KRTAP4-5Q9BYR2 181 aa6.21□□□□□ -1.41
DFFB-202ENST00000339350 MT1HL1P0DM35 61 aa6.16□□□□□ -1.42
DFFB-202ENST00000339350 PRO2289Q9P1D8 64 aa6.14□□□□□ -1.43
DFFB-202ENST00000339350 HERC2O95714 4834 aa6.12□□□□□ -1.43
DFFB-202ENST00000339350 MUC2Q02817 5179 aa6.11□□□□□ -1.43
DFFB-202ENST00000339350 R4GN34 69 aa6.06□□□□□ -1.44
DFFB-202ENST00000339350 HERC1Q15751 4861 aa6□□□□□ -1.45
DFFB-202ENST00000339350 PCLOQ9Y6V0 5065 aa5.95□□□□□ -1.46
DFFB-202ENST00000339350 M0QZ58 72 aa5.91□□□□□ -1.46
DFFB-202ENST00000339350 BIRC6Q9NR09 4857 aa5.88□□□□□ -1.47
DFFB-202ENST00000339350 LORP23490 312 aaPredicted RBP5.84□□□□□ -1.47
DFFB-202ENST00000339350 MUC17Q685J3 4493 aa5.82□□□□□ -1.48
DFFB-202ENST00000339350 KRTAP4-1Q9BYQ7 146 aa5.8□□□□□ -1.48
DFFB-202ENST00000339350 FAT4Q6V0I7 4981 aa5.8□□□□□ -1.48
DFFB-202ENST00000339350 RNF213Q63HN8 5207 aa5.78□□□□□ -1.48
DFFB-202ENST00000339350 INE1O15225 51 aa5.76□□□□□ -1.49
DFFB-202ENST00000339350 PP632Q6XCG6 107 aa5.75□□□□□ -1.49
DFFB-202ENST00000339350 SPRR5A0A1B0GTR4 108 aa5.68□□□□□ -1.5
DFFB-202ENST00000339350 UBR4Q5T4S7 5183 aa5.67□□□□□ -1.5
DFFB-202ENST00000339350 HMCN2Q8NDA2 5059 aa5.66□□□□□ -1.5
DFFB-202ENST00000339350 FLGP20930 4061 aaPredicted RBP5.55□□□□□ -1.52
DFFB-202ENST00000339350 KRTAP19-2Q3LHN2 52 aa5.51□□□□□ -1.53
DFFB-202ENST00000339350 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
DFFB-202ENST00000339350 TNP1P09430 55 aa5.36□□□□□ -1.55
DFFB-202ENST00000339350 M0R2T5 61 aa5.32□□□□□ -1.56
DFFB-202ENST00000339350 LCE2CQ5TA81 110 aa5.29□□□□□ -1.56
DFFB-202ENST00000339350 LCE2DQ5TA82 110 aaPredicted RBP5.24□□□□□ -1.57
DFFB-202ENST00000339350 MT1HP80294 61 aa5.18□□□□□ -1.58
DFFB-202ENST00000339350 KRTAP19-1Q8IUB9 90 aa5.13□□□□□ -1.59
DFFB-202ENST00000339350 USH2AO75445 5202 aa5.13□□□□□ -1.59
DFFB-202ENST00000339350 KRTAP10-10P60014 251 aa5.12□□□□□ -1.59
DFFB-202ENST00000339350 LCE3AQ5TA76 89 aa5.1□□□□□ -1.59
DFFB-202ENST00000339350 MT1FP04733 61 aa5.1□□□□□ -1.59
DFFB-202ENST00000339350 SPRR2GQ9BYE4 73 aa5.07□□□□□ -1.6
DFFB-202ENST00000339350 MT2AP02795 61 aa5.06□□□□□ -1.6
DFFB-202ENST00000339350 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
DFFB-202ENST00000339350 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.61
DFFB-202ENST00000339350 KMT2DO14686 5537 aa4.93□□□□□ -1.62
DFFB-202ENST00000339350 KRTAP10-5P60370 271 aa4.86□□□□□ -1.63
DFFB-202ENST00000339350 MT1XP80297 61 aa4.84□□□□□ -1.63
DFFB-202ENST00000339350 MT1BP07438 61 aa4.84□□□□□ -1.63
DFFB-202ENST00000339350 KRTAP10-12P60413 245 aa4.83□□□□□ -1.64
DFFB-202ENST00000339350 KRTAP8-1Q8IUC2 63 aa4.82□□□□□ -1.64
DFFB-202ENST00000339350 KRTAP10-7P60409 375 aaPredicted RBP4.8□□□□□ -1.64
DFFB-202ENST00000339350 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
DFFB-202ENST00000339350 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
DFFB-202ENST00000339350 KRTAP9-3Q9BYQ3 159 aa4.79□□□□□ -1.64
DFFB-202ENST00000339350 LCE2BO14633 110 aa4.72□□□□□ -1.65
DFFB-202ENST00000339350 LCE2AQ5TA79 106 aaPredicted RBP4.7□□□□□ -1.66
DFFB-202ENST00000339350 KRTAP19-5Q3LI72 72 aa4.6□□□□□ -1.67
DFFB-202ENST00000339350 SSPOA2VEC9 5147 aa4.58□□□□□ -1.68
DFFB-202ENST00000339350 KRTAP4-8A0A0G2JLE6 195 aa4.56□□□□□ -1.68
DFFB-202ENST00000339350 KRTAP4-8Q9BYQ9 185 aa4.56□□□□□ -1.68
DFFB-202ENST00000339350 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
DFFB-202ENST00000339350 KRTAP9-6A8MVA2 160 aa4.47□□□□□ -1.69
DFFB-202ENST00000339350 KRTAP2-3P0C7H8 128 aa4.47□□□□□ -1.69
DFFB-202ENST00000339350 KRTAP2-4Q9BYR9 128 aa4.47□□□□□ -1.69
DFFB-202ENST00000339350 KRTAP2-1Q9BYU5 128 aa4.47□□□□□ -1.69
DFFB-202ENST00000339350 KRTAP4-7Q9BYR0 210 aa4.46□□□□□ -1.7
DFFB-202ENST00000339350 MUC12Q9UKN1 5478 aa4.39□□□□□ -1.71
DFFB-202ENST00000339350 FCGBPQ9Y6R7 5405 aaPredicted RBP4.38□□□□□ -1.71
DFFB-202ENST00000339350 DSTQ03001 7570 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms