RNA–Protein interactions for RNA: ENST00000335007.9

PPP1CC-201, Transcript of protein phosphatase 1 catalytic subunit gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CC, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CC-201ENST00000335007 PKHD1P08F94 4074 aa10.36□□□□□ -0.75
PPP1CC-201ENST00000335007 KRTAP10-4P60372 401 aaPredicted RBP10.35□□□□□ -0.75
PPP1CC-201ENST00000335007 S4R3F8 94 aa10.34□□□□□ -0.75
PPP1CC-201ENST00000335007 APOBP04114 4563 aaKnown RBP10.31□□□□□ -0.76
PPP1CC-201ENST00000335007 C10orf95Q9H7T3 257 aa10.3□□□□□ -0.76
PPP1CC-201ENST00000335007 KRTAP15-1Q3LI76 137 aa10.23□□□□□ -0.77
PPP1CC-201ENST00000335007 KRTAP12-2P59991 146 aa10.2□□□□□ -0.78
PPP1CC-201ENST00000335007 DYNC1H1Q14204 4646 aaKnown RBP10.18□□□□□ -0.78
PPP1CC-201ENST00000335007 KRTAP10-8P60410 259 aa10.18□□□□□ -0.78
PPP1CC-201ENST00000335007 DMBT1Q9UGM3 2413 aaPredicted RBP10.16□□□□□ -0.78
PPP1CC-201ENST00000335007 NDUFAF8A1L188 74 aa10.14□□□□□ -0.79
PPP1CC-201ENST00000335007 FAT1Q14517 4588 aa10.13□□□□□ -0.79
PPP1CC-201ENST00000335007 A0A1B0GVY2 172 aa10.13□□□□□ -0.79
PPP1CC-201ENST00000335007 KRTAP12-1P59990 96 aa10.11□□□□□ -0.79
PPP1CC-201ENST00000335007 XP32Q5T750 250 aa10.09□□□□□ -0.79
PPP1CC-201ENST00000335007 FAT3Q8TDW7 4589 aa10.06□□□□□ -0.8
PPP1CC-201ENST00000335007 LRP1Q07954 4544 aaKnown RBP10.01□□□□□ -0.81
PPP1CC-201ENST00000335007 M0QZ58 72 aa9.98□□□□□ -0.81
PPP1CC-201ENST00000335007 TNXBP22105 4242 aa9.97□□□□□ -0.81
PPP1CC-201ENST00000335007 HSPG2P98160 4391 aa9.94□□□□□ -0.82
PPP1CC-201ENST00000335007 RYR2Q92736 4967 aa9.87□□□□□ -0.83
PPP1CC-201ENST00000335007 Q5VSD8 79 aa9.73□□□□□ -0.85
PPP1CC-201ENST00000335007 KMT2CQ8NEZ4 4911 aaKnown RBP9.64□□□□□ -0.87
PPP1CC-201ENST00000335007 MYCBP2O75592 4640 aa9.63□□□□□ -0.87
PPP1CC-201ENST00000335007 R4GN34 69 aa9.62□□□□□ -0.87
PPP1CC-201ENST00000335007 PLAC4Q8WY50 150 aa9.58□□□□□ -0.88
PPP1CC-201ENST00000335007 MT1HL1P0DM35 61 aa9.53□□□□□ -0.88
PPP1CC-201ENST00000335007 LPAP08519 4548 aa9.51□□□□□ -0.89
PPP1CC-201ENST00000335007 RYR1P21817 5038 aa9.42□□□□□ -0.9
PPP1CC-201ENST00000335007 RYR3Q15413 4870 aa9.38□□□□□ -0.91
PPP1CC-201ENST00000335007 PP632Q6XCG6 107 aa9.36□□□□□ -0.91
PPP1CC-201ENST00000335007 LRP2P98164 4655 aa9.36□□□□□ -0.91
PPP1CC-201ENST00000335007 KRTAP17-1Q9BYP8 105 aa9.35□□□□□ -0.91
PPP1CC-201ENST00000335007 LORP23490 312 aaPredicted RBP9.34□□□□□ -0.91
PPP1CC-201ENST00000335007 LUZP6Q538Z0 58 aa9.3□□□□□ -0.92
PPP1CC-201ENST00000335007 A0A0A0MQY5 61 aa9.19□□□□□ -0.94
PPP1CC-201ENST00000335007 CAMK2N1Q7Z7J9 78 aa9.19□□□□□ -0.94
PPP1CC-201ENST00000335007 SEC61BP60468 96 aaKnown RBP9.17□□□□□ -0.94
PPP1CC-201ENST00000335007 KIAA1109Q2LD37 5005 aa9.15□□□□□ -0.94
PPP1CC-201ENST00000335007 MUC17Q685J3 4493 aa9.05□□□□□ -0.96
PPP1CC-201ENST00000335007 EPPK1P58107 5090 aaKnown RBP9.01□□□□□ -0.97
PPP1CC-201ENST00000335007 KRTAP4-1Q9BYQ7 146 aa8.98□□□□□ -0.97
PPP1CC-201ENST00000335007 KRTAP23-1A1A580 65 aa8.93□□□□□ -0.98
PPP1CC-201ENST00000335007 KRTAP4-5Q9BYR2 181 aa8.92□□□□□ -0.98
PPP1CC-201ENST00000335007 TNP1P09430 55 aa8.92□□□□□ -0.98
PPP1CC-201ENST00000335007 ABCA13Q86UQ4 5058 aa8.91□□□□□ -0.98
PPP1CC-201ENST00000335007 KRTAP19-2Q3LHN2 52 aa8.91□□□□□ -0.98
PPP1CC-201ENST00000335007 SPRR5A0A1B0GTR4 108 aa8.86□□□□□ -0.99
PPP1CC-201ENST00000335007 J3QL48 77 aa8.7□□□□□ -1.02
PPP1CC-201ENST00000335007 HERC2O95714 4834 aa8.59□□□□□ -1.03
PPP1CC-201ENST00000335007 FLGP20930 4061 aaPredicted RBP8.54□□□□□ -1.04
PPP1CC-201ENST00000335007 BIRC6Q9NR09 4857 aa8.54□□□□□ -1.04
PPP1CC-201ENST00000335007 HERC1Q15751 4861 aa8.52□□□□□ -1.05
PPP1CC-201ENST00000335007 SPRR2GQ9BYE4 73 aa8.39□□□□□ -1.07
PPP1CC-201ENST00000335007 LCE3AQ5TA76 89 aa8.35□□□□□ -1.07
PPP1CC-201ENST00000335007 PRO2289Q9P1D8 64 aa8.32□□□□□ -1.08
PPP1CC-201ENST00000335007 KRTAP19-1Q8IUB9 90 aa8.29□□□□□ -1.08
PPP1CC-201ENST00000335007 MUC2Q02817 5179 aa8.29□□□□□ -1.08
PPP1CC-201ENST00000335007 PCLOQ9Y6V0 5065 aa8.24□□□□□ -1.09
PPP1CC-201ENST00000335007 INE1O15225 51 aa8.21□□□□□ -1.1
PPP1CC-201ENST00000335007 LCE2CQ5TA81 110 aa8.16□□□□□ -1.1
PPP1CC-201ENST00000335007 KRTAP8-1Q8IUC2 63 aa8.16□□□□□ -1.1
PPP1CC-201ENST00000335007 HMCN2Q8NDA2 5059 aa8.13□□□□□ -1.11
PPP1CC-201ENST00000335007 M0R2T5 61 aa8.05□□□□□ -1.12
PPP1CC-201ENST00000335007 KRTAP10-10P60014 251 aa7.96□□□□□ -1.13
PPP1CC-201ENST00000335007 MT1FP04733 61 aa7.95□□□□□ -1.14
PPP1CC-201ENST00000335007 KRTAP12-3P60328 96 aa7.94□□□□□ -1.14
PPP1CC-201ENST00000335007 KRTAP19-8Q3LI54 63 aa7.94□□□□□ -1.14
PPP1CC-201ENST00000335007 MT2AP02795 61 aa7.93□□□□□ -1.14
PPP1CC-201ENST00000335007 MT1HP80294 61 aa7.93□□□□□ -1.14
PPP1CC-201ENST00000335007 KRTAP10-5P60370 271 aa7.89□□□□□ -1.15
PPP1CC-201ENST00000335007 KRTAP10-12P60413 245 aa7.89□□□□□ -1.15
PPP1CC-201ENST00000335007 FAT4Q6V0I7 4981 aa7.88□□□□□ -1.15
PPP1CC-201ENST00000335007 MT1XP80297 61 aa7.86□□□□□ -1.15
PPP1CC-201ENST00000335007 KRTAP9-8Q9BYQ0 159 aa7.82□□□□□ -1.16
PPP1CC-201ENST00000335007 MT1BP07438 61 aa7.79□□□□□ -1.16
PPP1CC-201ENST00000335007 RNF213Q63HN8 5207 aa7.77□□□□□ -1.17
PPP1CC-201ENST00000335007 UBR4Q5T4S7 5183 aa7.73□□□□□ -1.17
PPP1CC-201ENST00000335007 KRTAP10-7P60409 375 aaPredicted RBP7.67□□□□□ -1.18
PPP1CC-201ENST00000335007 LCE3CQ5T5A8 94 aa7.51□□□□□ -1.21
PPP1CC-201ENST00000335007 KRTAP9-3Q9BYQ3 159 aa7.46□□□□□ -1.21
PPP1CC-201ENST00000335007 KRTAP19-5Q3LI72 72 aa7.44□□□□□ -1.22
PPP1CC-201ENST00000335007 KRTAP9-6A8MVA2 160 aa7.22□□□□□ -1.25
PPP1CC-201ENST00000335007 KRTAP2-3P0C7H8 128 aa7.19□□□□□ -1.26
PPP1CC-201ENST00000335007 KRTAP2-4Q9BYR9 128 aa7.19□□□□□ -1.26
PPP1CC-201ENST00000335007 KRTAP2-1Q9BYU5 128 aa7.19□□□□□ -1.26
PPP1CC-201ENST00000335007 LCE2AQ5TA79 106 aaPredicted RBP7.13□□□□□ -1.27
PPP1CC-201ENST00000335007 LCE2BO14633 110 aa7.08□□□□□ -1.28
PPP1CC-201ENST00000335007 KRTAP4-8A0A0G2JLE6 195 aa7.06□□□□□ -1.28
PPP1CC-201ENST00000335007 KRTAP4-8Q9BYQ9 185 aa7.06□□□□□ -1.28
PPP1CC-201ENST00000335007 KRTAP19-4Q3LI73 84 aa7.02□□□□□ -1.29
PPP1CC-201ENST00000335007 KRTAP19-7Q3SYF9 63 aa6.99□□□□□ -1.29
PPP1CC-201ENST00000335007 KMT2DO14686 5537 aa6.96□□□□□ -1.3
PPP1CC-201ENST00000335007 KRTAP4-7Q9BYR0 210 aa6.96□□□□□ -1.3
PPP1CC-201ENST00000335007 MT1LQ93083 61 aa6.84□□□□□ -1.31
PPP1CC-201ENST00000335007 USH2AO75445 5202 aa6.79□□□□□ -1.32
PPP1CC-201ENST00000335007 MT1EP04732 61 aa6.77□□□□□ -1.33
PPP1CC-201ENST00000335007 FSIP2Q5CZC0 6907 aa6.68□□□□□ -1.34
PPP1CC-201ENST00000335007 KRTAP19-6Q3LI70 58 aa6.48□□□□□ -1.37
PPP1CC-201ENST00000335007 LOC100996750A0A140TA64 210 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 172.3 ms