RNA–Protein interactions for RNA: ENST00000325180.12

GGA1-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene GGA1, Length 2,528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-201ENST00000325180 LINC01558Q9Y6Z2 57 aa7.42□□□□□ -1.22
GGA1-201ENST00000325180 MUC2Q02817 5179 aa7.41□□□□□ -1.22
GGA1-201ENST00000325180 RPL37P61927 97 aaKnown RBP7.41□□□□□ -1.22
GGA1-201ENST00000325180 HRES1P13985 223 aa7.36□□□□□ -1.23
GGA1-201ENST00000325180 RNF213Q63HN8 5207 aa7.33□□□□□ -1.24
GGA1-201ENST00000325180 C7orf65Q6ZTY9 151 aa7.33□□□□□ -1.24
GGA1-201ENST00000325180 SPINK7P58062 85 aa7.33□□□□□ -1.24
GGA1-201ENST00000325180 MUC17Q685J3 4493 aa7.3□□□□□ -1.24
GGA1-201ENST00000325180 H3BS24 57 aa7.3□□□□□ -1.24
GGA1-201ENST00000325180 KRTAP4-1Q9BYQ7 146 aa7.29□□□□□ -1.24
GGA1-201ENST00000325180 IGKV2D-30A0A075B6S6 120 aa7.28□□□□□ -1.24
GGA1-201ENST00000325180 IGKV2-30P06310 120 aa7.28□□□□□ -1.24
GGA1-201ENST00000325180 SEC61BP60468 96 aaKnown RBP7.26□□□□□ -1.25
GGA1-201ENST00000325180 PRAC1Q96KF2 57 aa7.19□□□□□ -1.26
GGA1-201ENST00000325180 ACYP2P14621 99 aa7.17□□□□□ -1.26
GGA1-201ENST00000325180 DMAC1Q96GE9 116 aa7.13□□□□□ -1.27
GGA1-201ENST00000325180 ADM2Q7Z4H4 148 aa7.12□□□□□ -1.27
GGA1-201ENST00000325180 LINC01554Q52M75 96 aa7.1□□□□□ -1.27
GGA1-201ENST00000325180 FAT4Q6V0I7 4981 aa7.09□□□□□ -1.27
GGA1-201ENST00000325180 A0A1B0GU69 56 aa7.06□□□□□ -1.28
GGA1-201ENST00000325180 SPATA8Q6RVD6 105 aa7.06□□□□□ -1.28
GGA1-201ENST00000325180 KRTAP3-1Q9BYR8 98 aa7.02□□□□□ -1.29
GGA1-201ENST00000325180 KRTAP19-2Q3LHN2 52 aa7□□□□□ -1.29
GGA1-201ENST00000325180 MIR22HGQ0VDD5 57 aa6.98□□□□□ -1.29
GGA1-201ENST00000325180 UQCR11O14957 56 aa6.97□□□□□ -1.29
GGA1-201ENST00000325180 COX6B2Q6YFQ2 88 aa6.96□□□□□ -1.29
GGA1-201ENST00000325180 LCE2CQ5TA81 110 aa6.93□□□□□ -1.3
GGA1-201ENST00000325180 FLGP20930 4061 aaPredicted RBP6.92□□□□□ -1.3
GGA1-201ENST00000325180 CSAG1Q6PB30 78 aa6.87□□□□□ -1.31
GGA1-201ENST00000325180 H1FX-AS1Q4G0G2 97 aa6.86□□□□□ -1.31
GGA1-201ENST00000325180 MT1HP80294 61 aa6.79□□□□□ -1.32
GGA1-201ENST00000325180 KRTAP3-3Q9BYR6 98 aa6.77□□□□□ -1.33
GGA1-201ENST00000325180 S4R3F8 94 aa6.77□□□□□ -1.33
GGA1-201ENST00000325180 H0YAA0 97 aa6.72□□□□□ -1.33
GGA1-201ENST00000325180 M0R2T5 61 aa6.71□□□□□ -1.34
GGA1-201ENST00000325180 LCE2AQ5TA79 106 aaPredicted RBP6.65□□□□□ -1.34
GGA1-201ENST00000325180 ROMO1P60602 79 aa6.65□□□□□ -1.35
GGA1-201ENST00000325180 KRTAP25-1Q3LHN0 102 aa6.62□□□□□ -1.35
GGA1-201ENST00000325180 A0A1B0GU33 70 aa6.61□□□□□ -1.35
GGA1-201ENST00000325180 KRTAP10-6P60371 365 aaPredicted RBP6.55□□□□□ -1.36
GGA1-201ENST00000325180 P0C880 135 aa6.52□□□□□ -1.37
GGA1-201ENST00000325180 LORP23490 312 aaPredicted RBP6.52□□□□□ -1.37
GGA1-201ENST00000325180 KRTAP9-8Q9BYQ0 159 aa6.51□□□□□ -1.37
GGA1-201ENST00000325180 MT2AP02795 61 aa6.47□□□□□ -1.37
GGA1-201ENST00000325180 KRTAP3-2Q9BYR7 98 aa6.47□□□□□ -1.37
GGA1-201ENST00000325180 MT1FP04733 61 aa6.45□□□□□ -1.38
GGA1-201ENST00000325180 CRIPTQ9P021 101 aa6.44□□□□□ -1.38
GGA1-201ENST00000325180 KRTAP13-4Q3LI77 160 aa6.43□□□□□ -1.38
GGA1-201ENST00000325180 K7ERS5 55 aa6.43□□□□□ -1.38
GGA1-201ENST00000325180 KRTAP10-10P60014 251 aa6.41□□□□□ -1.38
GGA1-201ENST00000325180 A0A0D9SG42 100 aa6.38□□□□□ -1.39
GGA1-201ENST00000325180 A0A0A0MQY5 61 aa6.31□□□□□ -1.4
GGA1-201ENST00000325180 KRTAP9-3Q9BYQ3 159 aa6.28□□□□□ -1.4
GGA1-201ENST00000325180 SPINT4Q6UDR6 99 aa6.26□□□□□ -1.41
GGA1-201ENST00000325180 NDUFAF8A1L188 74 aa6.25□□□□□ -1.41
GGA1-201ENST00000325180 M0QZ58 72 aa6.25□□□□□ -1.41
GGA1-201ENST00000325180 KRTAP19-1Q8IUB9 90 aa6.25□□□□□ -1.41
GGA1-201ENST00000325180 R4GN34 69 aa6.24□□□□□ -1.41
GGA1-201ENST00000325180 FSIP2Q5CZC0 6907 aa6.21□□□□□ -1.41
GGA1-201ENST00000325180 USH2AO75445 5202 aa6.2□□□□□ -1.42
GGA1-201ENST00000325180 C10orf95Q9H7T3 257 aa6.19□□□□□ -1.42
GGA1-201ENST00000325180 LCE2BO14633 110 aa6.18□□□□□ -1.42
GGA1-201ENST00000325180 SPRR2GQ9BYE4 73 aa6.18□□□□□ -1.42
GGA1-201ENST00000325180 KRTAP12-2P59991 146 aa6.17□□□□□ -1.42
GGA1-201ENST00000325180 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
GGA1-201ENST00000325180 KRTAP12-1P59990 96 aa6.09□□□□□ -1.43
GGA1-201ENST00000325180 MT1BP07438 61 aa6.04□□□□□ -1.44
GGA1-201ENST00000325180 KRTAP19-8Q3LI54 63 aa6.04□□□□□ -1.44
GGA1-201ENST00000325180 LCE2DQ5TA82 110 aaPredicted RBP6.04□□□□□ -1.44
GGA1-201ENST00000325180 KRTAP9-2Q9BYQ4 174 aa6.02□□□□□ -1.45
GGA1-201ENST00000325180 SSPOA2VEC9 5147 aa6.02□□□□□ -1.45
GGA1-201ENST00000325180 PLAC4Q8WY50 150 aa5.92□□□□□ -1.46
GGA1-201ENST00000325180 LUZP6Q538Z0 58 aa5.9□□□□□ -1.47
GGA1-201ENST00000325180 CAMK2N1Q7Z7J9 78 aa5.83□□□□□ -1.48
GGA1-201ENST00000325180 MT1XP80297 61 aa5.8□□□□□ -1.48
GGA1-201ENST00000325180 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
GGA1-201ENST00000325180 FCGBPQ9Y6R7 5405 aaPredicted RBP5.77□□□□□ -1.49
GGA1-201ENST00000325180 KRTAP19-6Q3LI70 58 aa5.76□□□□□ -1.49
GGA1-201ENST00000325180 CRCT1Q9UGL9 99 aa5.75□□□□□ -1.49
GGA1-201ENST00000325180 KMT2DO14686 5537 aa5.65□□□□□ -1.51
GGA1-201ENST00000325180 PRO2289Q9P1D8 64 aa5.65□□□□□ -1.51
GGA1-201ENST00000325180 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
GGA1-201ENST00000325180 KRTAP9-6A0A140TA67 174 aa5.59□□□□□ -1.51
GGA1-201ENST00000325180 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
GGA1-201ENST00000325180 PP632Q6XCG6 107 aa5.54□□□□□ -1.52
GGA1-201ENST00000325180 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
GGA1-201ENST00000325180 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
GGA1-201ENST00000325180 SYNE2Q8WXH0 6885 aaKnown RBP5.48□□□□□ -1.53
GGA1-201ENST00000325180 TNP1P09430 55 aa5.47□□□□□ -1.53
GGA1-201ENST00000325180 KRTAP10-12P60413 245 aa5.46□□□□□ -1.54
GGA1-201ENST00000325180 LCE3AQ5TA76 89 aa5.37□□□□□ -1.55
GGA1-201ENST00000325180 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.34□□□□□ -1.56
GGA1-201ENST00000325180 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
GGA1-201ENST00000325180 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
GGA1-201ENST00000325180 KRTAP8-1Q8IUC2 63 aa5.28□□□□□ -1.56
GGA1-201ENST00000325180 MUC12Q9UKN1 5478 aa5.25□□□□□ -1.57
GGA1-201ENST00000325180 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
GGA1-201ENST00000325180 KRTAP19-7Q3SYF9 63 aa5.19□□□□□ -1.58
GGA1-201ENST00000325180 SPRR2FQ96RM1 72 aa5.17□□□□□ -1.58
GGA1-201ENST00000325180 MDN1Q9NU22 5596 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms