RNA–Protein interactions for RNA: ENST00000325180.12

GGA1-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene GGA1, Length 2,528 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-201ENST00000325180 NISCHQ9Y2I1 1504 aa32.26■■■□□ 2.75
GGA1-201ENST00000325180 CCDC180Q9P1Z9 1646 aa28.18■■■□□ 2.1
GGA1-201ENST00000325180 ABCC9O60706 1549 aa27.26■■□□□ 1.95
GGA1-201ENST00000325180 DCAF8L2P0C7V8 631 aa27.04■■□□□ 1.92
GGA1-201ENST00000325180 ZCCHC6Q5VYS8 1495 aaKnown RBP26.99■■□□□ 1.91
GGA1-201ENST00000325180 DCAF1Q9Y4B6 1507 aa26.53■■□□□ 1.84
GGA1-201ENST00000325180 NACADO15069 1562 aa26.37■■□□□ 1.81
GGA1-201ENST00000325180 MYO15BQ96JP2 1530 aa26.33■■□□□ 1.81
GGA1-201ENST00000325180 SHROOM4Q9ULL8 1493 aa26.29■■□□□ 1.8
GGA1-201ENST00000325180 RB1CC1Q8TDY2 1594 aa26.27■■□□□ 1.8
GGA1-201ENST00000325180 SCRIBQ14160 1630 aa26.06■■□□□ 1.76
GGA1-201ENST00000325180 UNC13AQ9UPW8 1703 aa25.81■■□□□ 1.72
GGA1-201ENST00000325180 PABPN1Q86U42 306 aaKnown RBP eCLIP25.72■■□□□ 1.712e-8■■■□□ 14.7
GGA1-201ENST00000325180 BICRAQ9NZM4 1560 aa25.58■■□□□ 1.68
GGA1-201ENST00000325180 CECR2Q9BXF3 1484 aa25.22■■□□□ 1.63
GGA1-201ENST00000325180 SUPT5HO00267 1087 aaKnown RBP25.09■■□□□ 1.61
GGA1-201ENST00000325180 MROH2BQ7Z745 1585 aa24.98■■□□□ 1.59
GGA1-201ENST00000325180 RSF1Q96T23 1441 aaPredicted RBP24.93■■□□□ 1.58
GGA1-201ENST00000325180 BAZ1AQ9NRL2 1556 aaPredicted RBP24.89■■□□□ 1.58
GGA1-201ENST00000325180 SMARCA4P51532 1647 aa24.87■■□□□ 1.57
GGA1-201ENST00000325180 EIF4G1Q04637 1599 aaKnown RBP24.82■■□□□ 1.56
GGA1-201ENST00000325180 WIZO95785 1651 aa24.76■■□□□ 1.55
GGA1-201ENST00000325180 ATAD2BQ9ULI0 1458 aa24.59■■□□□ 1.53
GGA1-201ENST00000325180 CC2D2AQ9P2K1 1620 aa24.58■■□□□ 1.53
GGA1-201ENST00000325180 DNAJC5BQ9UF47 199 aa24.53■■□□□ 1.52
GGA1-201ENST00000325180 PEG3Q9GZU2 1588 aa24.51■■□□□ 1.51
GGA1-201ENST00000325180 SMARCA2P51531 1590 aa24.48■■□□□ 1.51
GGA1-201ENST00000325180 BAZ1BQ9UIG0 1483 aaKnown RBP24.42■■□□□ 1.5
GGA1-201ENST00000325180 NCAPD3P42695 1498 aa24.4■■□□□ 1.5
GGA1-201ENST00000325180 TOP2AP11388 1531 aaKnown RBP24.39■■□□□ 1.49
GGA1-201ENST00000325180 HMGXB3Q12766 1538 aa24.27■■□□□ 1.48
GGA1-201ENST00000325180 CCDC88BA6NC98 1476 aa24.22■■□□□ 1.47
GGA1-201ENST00000325180 NESP48681 1621 aa23.83■■□□□ 1.41
GGA1-201ENST00000325180 CADPSQ9ULU8 1353 aa23.79■■□□□ 1.4
GGA1-201ENST00000325180 CFTRP13569 1480 aa23.77■■□□□ 1.4
GGA1-201ENST00000325180 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
GGA1-201ENST00000325180 ABCC8Q09428 1581 aa23.66■■□□□ 1.38
GGA1-201ENST00000325180 LAMC3Q9Y6N6 1575 aa23.59■■□□□ 1.37
GGA1-201ENST00000325180 FANCD2Q9BXW9 1451 aa23.54■■□□□ 1.36
GGA1-201ENST00000325180 PRDM2Q13029 1718 aa23.52■■□□□ 1.36
GGA1-201ENST00000325180 TRIM41Q8WV44 630 aa23.52■■□□□ 1.35
GGA1-201ENST00000325180 PDS5BQ9NTI5 1447 aa23.46■■□□□ 1.35
GGA1-201ENST00000325180 WRNQ14191 1432 aaPredicted RBP eCLIP23.45■■□□□ 1.34
GGA1-201ENST00000325180 KIF21AQ7Z4S6 1674 aa23.45■■□□□ 1.34
GGA1-201ENST00000325180 SYNJ1O43426 1573 aa23.4■■□□□ 1.34
GGA1-201ENST00000325180 CEP164Q9UPV0 1460 aa23.4■■□□□ 1.34
GGA1-201ENST00000325180 CUX1P39880 1505 aa23.36■■□□□ 1.33
GGA1-201ENST00000325180 ERCC6Q03468 1493 aa23.34■■□□□ 1.33
GGA1-201ENST00000325180 URB2Q14146 1524 aaKnown RBP23.29■■□□□ 1.32
GGA1-201ENST00000325180 TOP2BQ02880 1626 aa23.26■■□□□ 1.31
GGA1-201ENST00000325180 TOPBP1Q92547 1522 aa23.24■■□□□ 1.31
GGA1-201ENST00000325180 FAM9AQ8IZU1 332 aaPredicted RBP23.23■■□□□ 1.31
GGA1-201ENST00000325180 BIVM-ERCC5R4GMW8 1640 aa23.21■■□□□ 1.31
GGA1-201ENST00000325180 MRC2Q9UBG0 1479 aa23.19■■□□□ 1.3
GGA1-201ENST00000325180 DNMBPQ6XZF7 1577 aa23.19■■□□□ 1.3
GGA1-201ENST00000325180 FGD5Q6ZNL6 1462 aa23.17■■□□□ 1.3
GGA1-201ENST00000325180 SOGA1O94964 1423 aa23.14■■□□□ 1.29
GGA1-201ENST00000325180 THOC2Q8NI27 1593 aaKnown RBP23.12■■□□□ 1.29
GGA1-201ENST00000325180 RUSC2Q8N2Y8 1516 aa23.11■■□□□ 1.29
GGA1-201ENST00000325180 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
GGA1-201ENST00000325180 POLA1P09884 1462 aaPredicted RBP23.11■■□□□ 1.29
GGA1-201ENST00000325180 WDR62O43379 1518 aa23.07■■□□□ 1.28
GGA1-201ENST00000325180 EHMT2Q96KQ7 1210 aa23.03■■□□□ 1.28
GGA1-201ENST00000325180 CUX2O14529 1486 aa22.99■■□□□ 1.27
GGA1-201ENST00000325180 LOC105371045A0A1W2PR82 267 aa22.93■■□□□ 1.26
GGA1-201ENST00000325180 TDRD9Q8NDG6 1382 aaKnown RBP22.93■■□□□ 1.26
GGA1-201ENST00000325180 TARBP1Q13395 1621 aaKnown RBP22.9■■□□□ 1.26
GGA1-201ENST00000325180 ABCA10Q8WWZ4 1543 aa22.89■■□□□ 1.25
GGA1-201ENST00000325180 CSRNP3Q8WYN3 585 aa22.87■■□□□ 1.25
GGA1-201ENST00000325180 KIF27Q86VH2 1401 aa22.87■■□□□ 1.25
GGA1-201ENST00000325180 ZNF608Q9ULD9 1512 aaPredicted RBP22.86■■□□□ 1.25
GGA1-201ENST00000325180 AQRO60306 1485 aaKnown RBP eCLIP22.85■■□□□ 1.254e-7■■■■□ 26.1
GGA1-201ENST00000325180 IFT140Q96RY7 1462 aa22.83■■□□□ 1.25
GGA1-201ENST00000325180 WDR97A6NE52 1622 aa22.83■■□□□ 1.25
GGA1-201ENST00000325180 EEA1Q15075 1411 aa22.78■■□□□ 1.24
GGA1-201ENST00000325180 IGF1RP08069 1367 aa22.77■■□□□ 1.24
GGA1-201ENST00000325180 GAPVD1Q14C86 1478 aa22.75■■□□□ 1.23
GGA1-201ENST00000325180 ABCA5Q8WWZ7 1642 aa22.73■■□□□ 1.23
GGA1-201ENST00000325180 EIF4G3O43432 1585 aaKnown RBP22.68■■□□□ 1.22
GGA1-201ENST00000325180 RAPGEF2Q9Y4G8 1499 aa22.64■■□□□ 1.22
GGA1-201ENST00000325180 CARMIL1Q5VZK9 1371 aa22.63■■□□□ 1.21
GGA1-201ENST00000325180 PRXQ9BXM0 1461 aa22.62■■□□□ 1.21
GGA1-201ENST00000325180 PBRM1Q86U86 1689 aa22.61■■□□□ 1.21
GGA1-201ENST00000325180 UBTFP17480 764 aaKnown RBP22.61■■□□□ 1.21
GGA1-201ENST00000325180 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
GGA1-201ENST00000325180 ERICH3Q5RHP9 1530 aa22.58■■□□□ 1.2
GGA1-201ENST00000325180 SNAPC4Q5SXM2 1469 aa22.56■■□□□ 1.2
GGA1-201ENST00000325180 KIF21BO75037 1637 aa22.55■■□□□ 1.2
GGA1-201ENST00000325180 GOLGA3Q08378 1498 aa22.54■■□□□ 1.2
GGA1-201ENST00000325180 FBLN2P98095 1184 aa22.53■■□□□ 1.2
GGA1-201ENST00000325180 RANGAP1P46060 587 aaPredicted RBP22.52■■□□□ 1.2
GGA1-201ENST00000325180 CUL7Q14999 1698 aa22.49■■□□□ 1.19
GGA1-201ENST00000325180 ADAMTS12P58397 1594 aa22.47■■□□□ 1.19
GGA1-201ENST00000325180 FHAD1B1AJZ9 1412 aa22.46■■□□□ 1.19
GGA1-201ENST00000325180 CHMP7Q8WUX9 453 aaPredicted RBP22.44■■□□□ 1.18
GGA1-201ENST00000325180 MAGI1Q96QZ7 1491 aaPredicted RBP22.41■■□□□ 1.18
GGA1-201ENST00000325180 TNIKQ9UKE5 1360 aa22.4■■□□□ 1.18
GGA1-201ENST00000325180 SYNJ2O15056 1496 aa22.37■■□□□ 1.17
GGA1-201ENST00000325180 GRIN2AQ12879 1464 aa22.35■■□□□ 1.17
GGA1-201ENST00000325180 CEP162Q5TB80 1403 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms