RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 A0A1B0GU69 56 aa10.09□□□□□ -0.79
CHMP6-201ENST00000325167 A6NED7 52 aa10.07□□□□□ -0.8
CHMP6-201ENST00000325167 KRTAP3-1Q9BYR8 98 aa10.06□□□□□ -0.8
CHMP6-201ENST00000325167 SEC61GP60059 68 aa9.98□□□□□ -0.81
CHMP6-201ENST00000325167 RNF213Q63HN8 5207 aa9.97□□□□□ -0.81
CHMP6-201ENST00000325167 CDC42SE1Q9NRR8 79 aa9.96□□□□□ -0.81
CHMP6-201ENST00000325167 LPAP08519 4548 aa9.92□□□□□ -0.82
CHMP6-201ENST00000325167 LCA10Q71F78 164 aa9.88□□□□□ -0.83
CHMP6-201ENST00000325167 UQCR11O14957 56 aa9.87□□□□□ -0.83
CHMP6-201ENST00000325167 SEC61BP60468 96 aaKnown RBP9.85□□□□□ -0.83
CHMP6-201ENST00000325167 RBM12B-AS1Q9P1G2 102 aa9.82□□□□□ -0.84
CHMP6-201ENST00000325167 H1FX-AS1Q4G0G2 97 aa9.79□□□□□ -0.84
CHMP6-201ENST00000325167 S4R3F8 94 aa9.79□□□□□ -0.84
CHMP6-201ENST00000325167 SPATA8Q6RVD6 105 aa9.77□□□□□ -0.84
CHMP6-201ENST00000325167 A8MU10 97 aa9.76□□□□□ -0.85
CHMP6-201ENST00000325167 MIR22HGQ0VDD5 57 aa9.76□□□□□ -0.85
CHMP6-201ENST00000325167 KRTAP3-3Q9BYR6 98 aa9.7□□□□□ -0.86
CHMP6-201ENST00000325167 PMAIP1Q13794 54 aa9.67□□□□□ -0.86
CHMP6-201ENST00000325167 A0A1B0GU33 70 aa9.65□□□□□ -0.86
CHMP6-201ENST00000325167 MUC2Q02817 5179 aa9.63□□□□□ -0.87
CHMP6-201ENST00000325167 CSAG1Q6PB30 78 aa9.56□□□□□ -0.88
CHMP6-201ENST00000325167 A6NN06 94 aa9.55□□□□□ -0.88
CHMP6-201ENST00000325167 H0YAA0 97 aa9.5□□□□□ -0.89
CHMP6-201ENST00000325167 MUC17Q685J3 4493 aa9.48□□□□□ -0.89
CHMP6-201ENST00000325167 KRTAP10-6P60371 365 aaPredicted RBP9.48□□□□□ -0.89
CHMP6-201ENST00000325167 KRTAP3-2Q9BYR7 98 aa9.45□□□□□ -0.9
CHMP6-201ENST00000325167 KRTAP4-1Q9BYQ7 146 aa9.41□□□□□ -0.9
CHMP6-201ENST00000325167 KTN1-AS1Q86SY8 53 aa9.4□□□□□ -0.9
CHMP6-201ENST00000325167 ADM2Q7Z4H4 148 aa9.37□□□□□ -0.91
CHMP6-201ENST00000325167 K7ERS5 55 aa9.35□□□□□ -0.91
CHMP6-201ENST00000325167 FAT4Q6V0I7 4981 aa9.34□□□□□ -0.91
CHMP6-201ENST00000325167 P0C880 135 aa9.32□□□□□ -0.92
CHMP6-201ENST00000325167 M0QZ58 72 aa9.26□□□□□ -0.93
CHMP6-201ENST00000325167 KRTAP19-2Q3LHN2 52 aa9.26□□□□□ -0.93
CHMP6-201ENST00000325167 LCE2AQ5TA79 106 aaPredicted RBP9.23□□□□□ -0.93
CHMP6-201ENST00000325167 KRTAP13-4Q3LI77 160 aa9.22□□□□□ -0.93
CHMP6-201ENST00000325167 A0A0D9SG42 100 aa9.13□□□□□ -0.95
CHMP6-201ENST00000325167 KRTAP9-2Q9BYQ4 174 aa9.09□□□□□ -0.95
CHMP6-201ENST00000325167 R4GN34 69 aa9.05□□□□□ -0.96
CHMP6-201ENST00000325167 FLGP20930 4061 aaPredicted RBP9□□□□□ -0.97
CHMP6-201ENST00000325167 KRTAP12-1P59990 96 aa8.95□□□□□ -0.98
CHMP6-201ENST00000325167 ROMO1P60602 79 aa8.94□□□□□ -0.98
CHMP6-201ENST00000325167 PRAC1Q96KF2 57 aa8.93□□□□□ -0.98
CHMP6-201ENST00000325167 KRTAP12-2P59991 146 aa8.92□□□□□ -0.98
CHMP6-201ENST00000325167 SPINT4Q6UDR6 99 aa8.92□□□□□ -0.98
CHMP6-201ENST00000325167 LCE2CQ5TA81 110 aa8.91□□□□□ -0.98
CHMP6-201ENST00000325167 CRIPTQ9P021 101 aa8.91□□□□□ -0.98
CHMP6-201ENST00000325167 LINC01554Q52M75 96 aa8.84□□□□□ -0.99
CHMP6-201ENST00000325167 LORP23490 312 aaPredicted RBP8.83□□□□□ -1
CHMP6-201ENST00000325167 MT1HP80294 61 aa8.81□□□□□ -1
CHMP6-201ENST00000325167 KRTAP9-6A0A140TA67 174 aa8.79□□□□□ -1
CHMP6-201ENST00000325167 M0R2T5 61 aa8.74□□□□□ -1.01
CHMP6-201ENST00000325167 KRTAP25-1Q3LHN0 102 aa8.74□□□□□ -1.01
CHMP6-201ENST00000325167 LCE2DQ5TA82 110 aaPredicted RBP8.72□□□□□ -1.01
CHMP6-201ENST00000325167 FSIP2Q5CZC0 6907 aa8.72□□□□□ -1.01
CHMP6-201ENST00000325167 CRCT1Q9UGL9 99 aa8.56□□□□□ -1.04
CHMP6-201ENST00000325167 SPRR2GQ9BYE4 73 aa8.54□□□□□ -1.04
CHMP6-201ENST00000325167 CAMK2N1Q7Z7J9 78 aa8.53□□□□□ -1.04
CHMP6-201ENST00000325167 MT2AP02795 61 aa8.46□□□□□ -1.05
CHMP6-201ENST00000325167 KRTAP10-10P60014 251 aa8.45□□□□□ -1.06
CHMP6-201ENST00000325167 KRTAP9-8Q9BYQ0 159 aa8.45□□□□□ -1.06
CHMP6-201ENST00000325167 C10orf95Q9H7T3 257 aa8.43□□□□□ -1.06
CHMP6-201ENST00000325167 KRTAP19-1Q8IUB9 90 aa8.41□□□□□ -1.06
CHMP6-201ENST00000325167 MT1FP04733 61 aa8.4□□□□□ -1.06
CHMP6-201ENST00000325167 PLAC4Q8WY50 150 aa8.39□□□□□ -1.07
CHMP6-201ENST00000325167 KRTAP19-8Q3LI54 63 aa8.26□□□□□ -1.09
CHMP6-201ENST00000325167 PP632Q6XCG6 107 aa8.23□□□□□ -1.09
CHMP6-201ENST00000325167 USH2AO75445 5202 aa8.21□□□□□ -1.09
CHMP6-201ENST00000325167 TNP1P09430 55 aa8.21□□□□□ -1.1
CHMP6-201ENST00000325167 SSPOA2VEC9 5147 aa8.16□□□□□ -1.1
CHMP6-201ENST00000325167 KRTAP9-3Q9BYQ3 159 aa8.14□□□□□ -1.11
CHMP6-201ENST00000325167 KRTAP23-1A1A580 65 aa8.13□□□□□ -1.11
CHMP6-201ENST00000325167 LCE2BO14633 110 aa8.06□□□□□ -1.12
CHMP6-201ENST00000325167 MT1BP07438 61 aa8.05□□□□□ -1.12
CHMP6-201ENST00000325167 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.98□□□□□ -1.13
CHMP6-201ENST00000325167 FCGBPQ9Y6R7 5405 aaPredicted RBP7.96□□□□□ -1.13
CHMP6-201ENST00000325167 KRTAP9-7A8MTY7 169 aa7.9□□□□□ -1.14
CHMP6-201ENST00000325167 PRO2289Q9P1D8 64 aa7.89□□□□□ -1.15
CHMP6-201ENST00000325167 H3BS24 57 aa7.89□□□□□ -1.15
CHMP6-201ENST00000325167 MT1XP80297 61 aa7.88□□□□□ -1.15
CHMP6-201ENST00000325167 KRTAP10-5P60370 271 aa7.87□□□□□ -1.15
CHMP6-201ENST00000325167 KRTAP15-1Q3LI76 137 aa7.79□□□□□ -1.16
CHMP6-201ENST00000325167 MACF1Q9UPN3 7388 aaKnown RBP7.78□□□□□ -1.16
CHMP6-201ENST00000325167 KRTAP19-6Q3LI70 58 aa7.75□□□□□ -1.17
CHMP6-201ENST00000325167 SYNE2Q8WXH0 6885 aaKnown RBP7.74□□□□□ -1.17
CHMP6-201ENST00000325167 LCE3AQ5TA76 89 aa7.69□□□□□ -1.18
CHMP6-201ENST00000325167 KRTAP10-12P60413 245 aa7.65□□□□□ -1.18
CHMP6-201ENST00000325167 KRTAP8-1Q8IUC2 63 aa7.61□□□□□ -1.19
CHMP6-201ENST00000325167 KRTAP10-7P60409 375 aaPredicted RBP7.55□□□□□ -1.2
CHMP6-201ENST00000325167 KRTAP12-3P60328 96 aa7.42□□□□□ -1.22
CHMP6-201ENST00000325167 KRTAP6-3Q3LI67 103 aa7.41□□□□□ -1.22
CHMP6-201ENST00000325167 LUZP6Q538Z0 58 aa7.37□□□□□ -1.23
CHMP6-201ENST00000325167 SPRR5A0A1B0GTR4 108 aa7.35□□□□□ -1.23
CHMP6-201ENST00000325167 NDUFAF8A1L188 74 aa7.34□□□□□ -1.23
CHMP6-201ENST00000325167 NEBP20929 6669 aa7.22□□□□□ -1.25
CHMP6-201ENST00000325167 MUC12Q9UKN1 5478 aa7.22□□□□□ -1.25
CHMP6-201ENST00000325167 KRTAP19-5Q3LI72 72 aa7.2□□□□□ -1.26
CHMP6-201ENST00000325167 KRTAP4-8A0A0G2JLE6 195 aa7.12□□□□□ -1.27
CHMP6-201ENST00000325167 KRTAP4-8Q9BYQ9 185 aa7.12□□□□□ -1.27
CHMP6-201ENST00000325167 KRTAP19-4Q3LI73 84 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms