RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 KRTAP3-1Q9BYR8 98 aa9.08□□□□□ -0.96
SYNE4-201ENST00000324444 COA5Q86WW8 74 aa9.07□□□□□ -0.96
SYNE4-201ENST00000324444 RPS28P62857 69 aaKnown RBP9.06□□□□□ -0.96
SYNE4-201ENST00000324444 SPTSSBQ8NFR3 76 aa9.03□□□□□ -0.96
SYNE4-201ENST00000324444 MT1HP80294 61 aa9□□□□□ -0.97
SYNE4-201ENST00000324444 S4R3F8 94 aa8.98□□□□□ -0.97
SYNE4-201ENST00000324444 KRTAP9-6A0A140TA67 174 aa8.96□□□□□ -0.98
SYNE4-201ENST00000324444 LCE2DQ5TA82 110 aaPredicted RBP8.94□□□□□ -0.98
SYNE4-201ENST00000324444 FLGP20930 4061 aaPredicted RBP8.91□□□□□ -0.98
SYNE4-201ENST00000324444 SMIM26A0A096LP01 95 aa8.87□□□□□ -0.99
SYNE4-201ENST00000324444 LCA10Q71F78 164 aa8.87□□□□□ -0.99
SYNE4-201ENST00000324444 M0R2T5 61 aa8.86□□□□□ -0.99
SYNE4-201ENST00000324444 CSAG1Q6PB30 78 aa8.85□□□□□ -0.99
SYNE4-201ENST00000324444 LORP23490 312 aaPredicted RBP8.84□□□□□ -0.99
SYNE4-201ENST00000324444 KRTAP10-6P60371 365 aaPredicted RBP8.84□□□□□ -0.99
SYNE4-201ENST00000324444 V9GYY9 64 aa8.82□□□□□ -1
SYNE4-201ENST00000324444 KRTAP3-3Q9BYR6 98 aa8.78□□□□□ -1
SYNE4-201ENST00000324444 FSIP2Q5CZC0 6907 aa8.75□□□□□ -1.01
SYNE4-201ENST00000324444 CRCT1Q9UGL9 99 aa8.74□□□□□ -1.01
SYNE4-201ENST00000324444 SEC61GP60059 68 aa8.73□□□□□ -1.01
SYNE4-201ENST00000324444 Q1T7F1 81 aa8.72□□□□□ -1.01
SYNE4-201ENST00000324444 LINC01558Q9Y6Z2 57 aa8.7□□□□□ -1.02
SYNE4-201ENST00000324444 PRR15LQ9BU68 103 aa8.69□□□□□ -1.02
SYNE4-201ENST00000324444 A0A1B0GU69 56 aa8.64□□□□□ -1.03
SYNE4-201ENST00000324444 H0YAA0 97 aa8.64□□□□□ -1.03
SYNE4-201ENST00000324444 ADM2Q7Z4H4 148 aa8.51□□□□□ -1.05
SYNE4-201ENST00000324444 KRTAP9-8Q9BYQ0 159 aa8.5□□□□□ -1.05
SYNE4-201ENST00000324444 PSPHP1O15172 72 aa8.48□□□□□ -1.05
SYNE4-201ENST00000324444 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
SYNE4-201ENST00000324444 A0A1B0GU33 70 aa8.41□□□□□ -1.06
SYNE4-201ENST00000324444 Q5VV11 94 aa8.41□□□□□ -1.06
SYNE4-201ENST00000324444 UQCR11O14957 56 aa8.38□□□□□ -1.07
SYNE4-201ENST00000324444 MT2AP02795 61 aa8.38□□□□□ -1.07
SYNE4-201ENST00000324444 CRIPTQ9P021 101 aa8.38□□□□□ -1.07
SYNE4-201ENST00000324444 P0C880 135 aa8.37□□□□□ -1.07
SYNE4-201ENST00000324444 M0QZ58 72 aa8.35□□□□□ -1.07
SYNE4-201ENST00000324444 MT1FP04733 61 aa8.33□□□□□ -1.08
SYNE4-201ENST00000324444 USH2AO75445 5202 aa8.32□□□□□ -1.08
SYNE4-201ENST00000324444 A6NED7 52 aa8.31□□□□□ -1.08
SYNE4-201ENST00000324444 KRTAP10-10P60014 251 aa8.29□□□□□ -1.08
SYNE4-201ENST00000324444 R4GN34 69 aa8.29□□□□□ -1.08
SYNE4-201ENST00000324444 SSPOA2VEC9 5147 aa8.28□□□□□ -1.08
SYNE4-201ENST00000324444 KRTAP9-3Q9BYQ3 159 aa8.24□□□□□ -1.09
SYNE4-201ENST00000324444 MIR22HGQ0VDD5 57 aa8.23□□□□□ -1.09
SYNE4-201ENST00000324444 LCE2BO14633 110 aa8.22□□□□□ -1.09
SYNE4-201ENST00000324444 SPATA8Q6RVD6 105 aa8.19□□□□□ -1.1
SYNE4-201ENST00000324444 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.14□□□□□ -1.11
SYNE4-201ENST00000324444 CDC42SE1Q9NRR8 79 aa8.14□□□□□ -1.11
SYNE4-201ENST00000324444 KRTAP13-4Q3LI77 160 aa8.11□□□□□ -1.11
SYNE4-201ENST00000324444 KRTAP19-1Q8IUB9 90 aa8.11□□□□□ -1.11
SYNE4-201ENST00000324444 SPRR2GQ9BYE4 73 aa8.1□□□□□ -1.11
SYNE4-201ENST00000324444 FCGBPQ9Y6R7 5405 aaPredicted RBP8.09□□□□□ -1.11
SYNE4-201ENST00000324444 BRK1Q8WUW1 75 aa8.07□□□□□ -1.12
SYNE4-201ENST00000324444 KRTAP9-7A8MTY7 169 aa8.06□□□□□ -1.12
SYNE4-201ENST00000324444 LINC01554Q52M75 96 aa8.04□□□□□ -1.12
SYNE4-201ENST00000324444 A6NN06 94 aa8.03□□□□□ -1.12
SYNE4-201ENST00000324444 K7ERS5 55 aa8.03□□□□□ -1.12
SYNE4-201ENST00000324444 A0A0D9SG42 100 aa8.02□□□□□ -1.13
SYNE4-201ENST00000324444 A8MU10 97 aa7.99□□□□□ -1.13
SYNE4-201ENST00000324444 KRTAP19-6Q3LI70 58 aa7.93□□□□□ -1.14
SYNE4-201ENST00000324444 KRTAP19-8Q3LI54 63 aa7.9□□□□□ -1.14
SYNE4-201ENST00000324444 SPINT4Q6UDR6 99 aa7.9□□□□□ -1.14
SYNE4-201ENST00000324444 PLAC4Q8WY50 150 aa7.89□□□□□ -1.15
SYNE4-201ENST00000324444 KRTAP12-1P59990 96 aa7.88□□□□□ -1.15
SYNE4-201ENST00000324444 PRO0628Q9UI54 55 aa7.86□□□□□ -1.15
SYNE4-201ENST00000324444 MACF1Q9UPN3 7388 aaKnown RBP7.84□□□□□ -1.15
SYNE4-201ENST00000324444 KRTAP12-2P59991 146 aa7.82□□□□□ -1.16
SYNE4-201ENST00000324444 MT1BP07438 61 aa7.78□□□□□ -1.16
SYNE4-201ENST00000324444 CAMK2N1Q7Z7J9 78 aa7.76□□□□□ -1.17
SYNE4-201ENST00000324444 SYNE2Q8WXH0 6885 aaKnown RBP7.74□□□□□ -1.17
SYNE4-201ENST00000324444 PMAIP1Q13794 54 aa7.67□□□□□ -1.18
SYNE4-201ENST00000324444 PRO2289Q9P1D8 64 aa7.6□□□□□ -1.19
SYNE4-201ENST00000324444 KRTAP6-3Q3LI67 103 aa7.58□□□□□ -1.2
SYNE4-201ENST00000324444 ROMO1P60602 79 aa7.55□□□□□ -1.2
SYNE4-201ENST00000324444 KRTAP10-5P60370 271 aa7.46□□□□□ -1.21
SYNE4-201ENST00000324444 MT1XP80297 61 aa7.45□□□□□ -1.22
SYNE4-201ENST00000324444 C10orf95Q9H7T3 257 aa7.43□□□□□ -1.22
SYNE4-201ENST00000324444 TNP1P09430 55 aa7.38□□□□□ -1.23
SYNE4-201ENST00000324444 KRTAP25-1Q3LHN0 102 aa7.37□□□□□ -1.23
SYNE4-201ENST00000324444 KTN1-AS1Q86SY8 53 aa7.3□□□□□ -1.24
SYNE4-201ENST00000324444 NEBP20929 6669 aa7.28□□□□□ -1.24
SYNE4-201ENST00000324444 MUC12Q9UKN1 5478 aa7.28□□□□□ -1.24
SYNE4-201ENST00000324444 KRTAP5-9P26371 169 aa7.2□□□□□ -1.26
SYNE4-201ENST00000324444 KRTAP23-1A1A580 65 aa7.18□□□□□ -1.26
SYNE4-201ENST00000324444 PP632Q6XCG6 107 aa7.15□□□□□ -1.26
SYNE4-201ENST00000324444 KMT2DO14686 5537 aa7.15□□□□□ -1.27
SYNE4-201ENST00000324444 KRTAP10-12P60413 245 aa7.12□□□□□ -1.27
SYNE4-201ENST00000324444 KRTAP10-7P60409 375 aaPredicted RBP7.1□□□□□ -1.27
SYNE4-201ENST00000324444 MDN1Q9NU22 5596 aa7.08□□□□□ -1.28
SYNE4-201ENST00000324444 KRTAP20-1Q3LI63 56 aa7.07□□□□□ -1.28
SYNE4-201ENST00000324444 PRAC1Q96KF2 57 aa7.05□□□□□ -1.28
SYNE4-201ENST00000324444 SPRR2FQ96RM1 72 aa7□□□□□ -1.29
SYNE4-201ENST00000324444 LCE3AQ5TA76 89 aa6.95□□□□□ -1.3
SYNE4-201ENST00000324444 KRTAP8-1Q8IUC2 63 aa6.95□□□□□ -1.3
SYNE4-201ENST00000324444 SPRR2EP22531 72 aa6.92□□□□□ -1.3
SYNE4-201ENST00000324444 SPRR2BP35325 72 aa6.92□□□□□ -1.3
SYNE4-201ENST00000324444 SPRR2AP35326 72 aa6.92□□□□□ -1.3
SYNE4-201ENST00000324444 KRTAP4-8A0A0G2JLE6 195 aa6.9□□□□□ -1.31
SYNE4-201ENST00000324444 KRTAP4-8Q9BYQ9 185 aa6.9□□□□□ -1.31
SYNE4-201ENST00000324444 SVIPQ8NHG7 77 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms