RNA–Protein interactions for RNA: ENST00000323851.11

NDRG1-201, Transcript of N-myc downstream regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDRG1, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-201ENST00000323851 HSPG2P98160 4391 aa6.06□□□□□ -1.44
NDRG1-201ENST00000323851 LRP1Q07954 4544 aaKnown RBP6.05□□□□□ -1.44
NDRG1-201ENST00000323851 IGKV2D-30A0A075B6S6 120 aa6.05□□□□□ -1.44
NDRG1-201ENST00000323851 IGKV2-30P06310 120 aa6.05□□□□□ -1.44
NDRG1-201ENST00000323851 SEC61BP60468 96 aaKnown RBP6.02□□□□□ -1.45
NDRG1-201ENST00000323851 Q8N1X5 172 aa6.02□□□□□ -1.45
NDRG1-201ENST00000323851 RYR1P21817 5038 aa6.02□□□□□ -1.45
NDRG1-201ENST00000323851 KRTAP17-1Q9BYP8 105 aa6.02□□□□□ -1.45
NDRG1-201ENST00000323851 KIAA1109Q2LD37 5005 aa6.01□□□□□ -1.45
NDRG1-201ENST00000323851 DMBT1Q9UGM3 2413 aaPredicted RBP6.01□□□□□ -1.45
NDRG1-201ENST00000323851 K7ERS5 55 aa6□□□□□ -1.45
NDRG1-201ENST00000323851 KRTAP10-8P60410 259 aa5.97□□□□□ -1.45
NDRG1-201ENST00000323851 TNXBP22105 4242 aa5.96□□□□□ -1.46
NDRG1-201ENST00000323851 EPPK1P58107 5090 aaKnown RBP5.95□□□□□ -1.46
NDRG1-201ENST00000323851 MYCBP2O75592 4640 aa5.93□□□□□ -1.46
NDRG1-201ENST00000323851 TPRXLQ17RH7 258 aa5.93□□□□□ -1.46
NDRG1-201ENST00000323851 FAT3Q8TDW7 4589 aa5.91□□□□□ -1.46
NDRG1-201ENST00000323851 A0A1B0GU33 70 aa5.87□□□□□ -1.47
NDRG1-201ENST00000323851 MT1HL1P0DM35 61 aa5.85□□□□□ -1.47
NDRG1-201ENST00000323851 H1FX-AS1Q4G0G2 97 aa5.81□□□□□ -1.48
NDRG1-201ENST00000323851 KRTAP4-5Q9BYR2 181 aa5.8□□□□□ -1.48
NDRG1-201ENST00000323851 C10orf95Q9H7T3 257 aa5.79□□□□□ -1.48
NDRG1-201ENST00000323851 XP32Q5T750 250 aa5.78□□□□□ -1.48
NDRG1-201ENST00000323851 KRTAP3-1Q9BYR8 98 aa5.76□□□□□ -1.49
NDRG1-201ENST00000323851 RPL37P61927 97 aaKnown RBP5.76□□□□□ -1.49
NDRG1-201ENST00000323851 ABCA13Q86UQ4 5058 aa5.69□□□□□ -1.5
NDRG1-201ENST00000323851 COX6B2Q6YFQ2 88 aa5.69□□□□□ -1.5
NDRG1-201ENST00000323851 LRP2P98164 4655 aa5.65□□□□□ -1.5
NDRG1-201ENST00000323851 LPAP08519 4548 aa5.64□□□□□ -1.51
NDRG1-201ENST00000323851 HERC2O95714 4834 aa5.6□□□□□ -1.51
NDRG1-201ENST00000323851 BIRC6Q9NR09 4857 aa5.55□□□□□ -1.52
NDRG1-201ENST00000323851 KRTAP3-3Q9BYR6 98 aa5.53□□□□□ -1.52
NDRG1-201ENST00000323851 S4R3F8 94 aa5.52□□□□□ -1.53
NDRG1-201ENST00000323851 CAMK2N1Q7Z7J9 78 aa5.5□□□□□ -1.53
NDRG1-201ENST00000323851 A0A0D9SG42 100 aa5.49□□□□□ -1.53
NDRG1-201ENST00000323851 KRTAP3-2Q9BYR7 98 aa5.46□□□□□ -1.53
NDRG1-201ENST00000323851 KRTAP13-4Q3LI77 160 aa5.46□□□□□ -1.54
NDRG1-201ENST00000323851 PLAC4Q8WY50 150 aa5.43□□□□□ -1.54
NDRG1-201ENST00000323851 PCLOQ9Y6V0 5065 aa5.4□□□□□ -1.54
NDRG1-201ENST00000323851 KRTAP10-6P60371 365 aaPredicted RBP5.4□□□□□ -1.55
NDRG1-201ENST00000323851 KRTAP4-1Q9BYQ7 146 aa5.4□□□□□ -1.55
NDRG1-201ENST00000323851 HERC1Q15751 4861 aa5.36□□□□□ -1.55
NDRG1-201ENST00000323851 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
NDRG1-201ENST00000323851 KRTAP12-2P59991 146 aa5.35□□□□□ -1.55
NDRG1-201ENST00000323851 LCE2DQ5TA82 110 aaPredicted RBP5.33□□□□□ -1.56
NDRG1-201ENST00000323851 MUC2Q02817 5179 aa5.31□□□□□ -1.56
NDRG1-201ENST00000323851 PRO2289Q9P1D8 64 aa5.28□□□□□ -1.56
NDRG1-201ENST00000323851 HMCN2Q8NDA2 5059 aa5.25□□□□□ -1.57
NDRG1-201ENST00000323851 KRTAP12-1P59990 96 aa5.25□□□□□ -1.57
NDRG1-201ENST00000323851 KRTAP19-2Q3LHN2 52 aa5.23□□□□□ -1.57
NDRG1-201ENST00000323851 M0QZ58 72 aa5.15□□□□□ -1.59
NDRG1-201ENST00000323851 R4GN34 69 aa5.13□□□□□ -1.59
NDRG1-201ENST00000323851 LORP23490 312 aaPredicted RBP5.12□□□□□ -1.59
NDRG1-201ENST00000323851 FLGP20930 4061 aaPredicted RBP5.11□□□□□ -1.59
NDRG1-201ENST00000323851 UBR4Q5T4S7 5183 aa5.08□□□□□ -1.6
NDRG1-201ENST00000323851 RNF213Q63HN8 5207 aa5.07□□□□□ -1.6
NDRG1-201ENST00000323851 FAT4Q6V0I7 4981 aa5.06□□□□□ -1.6
NDRG1-201ENST00000323851 LCE2CQ5TA81 110 aa5.03□□□□□ -1.6
NDRG1-201ENST00000323851 INE1O15225 51 aa4.97□□□□□ -1.61
NDRG1-201ENST00000323851 M0R2T5 61 aa4.96□□□□□ -1.62
NDRG1-201ENST00000323851 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
NDRG1-201ENST00000323851 MT1HP80294 61 aa4.92□□□□□ -1.62
NDRG1-201ENST00000323851 PP632Q6XCG6 107 aa4.92□□□□□ -1.62
NDRG1-201ENST00000323851 KRTAP10-10P60014 251 aa4.79□□□□□ -1.64
NDRG1-201ENST00000323851 LCE2AQ5TA79 106 aaPredicted RBP4.79□□□□□ -1.64
NDRG1-201ENST00000323851 MT2AP02795 61 aa4.78□□□□□ -1.64
NDRG1-201ENST00000323851 MT1FP04733 61 aa4.78□□□□□ -1.64
NDRG1-201ENST00000323851 LCE2BO14633 110 aa4.77□□□□□ -1.65
NDRG1-201ENST00000323851 KRTAP19-1Q8IUB9 90 aa4.77□□□□□ -1.65
NDRG1-201ENST00000323851 KRTAP9-8Q9BYQ0 159 aa4.76□□□□□ -1.65
NDRG1-201ENST00000323851 SPRR2GQ9BYE4 73 aa4.76□□□□□ -1.65
NDRG1-201ENST00000323851 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
NDRG1-201ENST00000323851 TNP1P09430 55 aa4.61□□□□□ -1.67
NDRG1-201ENST00000323851 KRTAP19-8Q3LI54 63 aa4.58□□□□□ -1.68
NDRG1-201ENST00000323851 KRTAP9-3Q9BYQ3 159 aa4.57□□□□□ -1.68
NDRG1-201ENST00000323851 MT1BP07438 61 aa4.56□□□□□ -1.68
NDRG1-201ENST00000323851 KRTAP10-5P60370 271 aa4.47□□□□□ -1.69
NDRG1-201ENST00000323851 MT1XP80297 61 aa4.47□□□□□ -1.69
NDRG1-201ENST00000323851 USH2AO75445 5202 aa4.41□□□□□ -1.7
NDRG1-201ENST00000323851 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
NDRG1-201ENST00000323851 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
NDRG1-201ENST00000323851 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
NDRG1-201ENST00000323851 KRTAP8-1Q8IUC2 63 aa4.26□□□□□ -1.73
NDRG1-201ENST00000323851 KMT2DO14686 5537 aa4.21□□□□□ -1.74
NDRG1-201ENST00000323851 KRTAP12-3P60328 96 aa4.2□□□□□ -1.74
NDRG1-201ENST00000323851 FSIP2Q5CZC0 6907 aa4.2□□□□□ -1.74
NDRG1-201ENST00000323851 SSPOA2VEC9 5147 aa4.15□□□□□ -1.75
NDRG1-201ENST00000323851 KRTAP4-8A0A0G2JLE6 195 aa4.15□□□□□ -1.75
NDRG1-201ENST00000323851 KRTAP4-8Q9BYQ9 185 aa4.15□□□□□ -1.75
NDRG1-201ENST00000323851 KRTAP19-5Q3LI72 72 aa4.12□□□□□ -1.75
NDRG1-201ENST00000323851 KRTAP19-6Q3LI70 58 aa4.03□□□□□ -1.76
NDRG1-201ENST00000323851 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
NDRG1-201ENST00000323851 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
NDRG1-201ENST00000323851 FCGBPQ9Y6R7 5405 aaPredicted RBP3.93□□□□□ -1.78
NDRG1-201ENST00000323851 MT1EP04732 61 aa3.89□□□□□ -1.79
NDRG1-201ENST00000323851 KRTAP4-7Q9BYR0 210 aa3.87□□□□□ -1.79
NDRG1-201ENST00000323851 MT1LQ93083 61 aa3.85□□□□□ -1.79
NDRG1-201ENST00000323851 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
NDRG1-201ENST00000323851 KRTAP2-4Q9BYR9 128 aa3.83□□□□□ -1.8
NDRG1-201ENST00000323851 KRTAP2-1Q9BYU5 128 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms