RNA–Protein interactions for RNA: ENST00000323434.12

RPH3AL-201, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 1 (best) BASIC

Gene RPH3AL, Length 2,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-201ENST00000323434 KRTAP10-8P60410 259 aa8.04□□□□□ -1.12
RPH3AL-201ENST00000323434 MYCBP2O75592 4640 aa8.02□□□□□ -1.13
RPH3AL-201ENST00000323434 RYR1P21817 5038 aa7.98□□□□□ -1.13
RPH3AL-201ENST00000323434 KRTAP17-1Q9BYP8 105 aa7.97□□□□□ -1.13
RPH3AL-201ENST00000323434 KRTAP25-1Q3LHN0 102 aa7.97□□□□□ -1.13
RPH3AL-201ENST00000323434 COX6B2Q6YFQ2 88 aa7.97□□□□□ -1.13
RPH3AL-201ENST00000323434 KIAA1109Q2LD37 5005 aa7.95□□□□□ -1.14
RPH3AL-201ENST00000323434 XP32Q5T750 250 aa7.9□□□□□ -1.14
RPH3AL-201ENST00000323434 RPL37P61927 97 aaKnown RBP7.9□□□□□ -1.15
RPH3AL-201ENST00000323434 CRIPTQ9P021 101 aa7.84□□□□□ -1.15
RPH3AL-201ENST00000323434 J3QL48 77 aa7.84□□□□□ -1.15
RPH3AL-201ENST00000323434 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
RPH3AL-201ENST00000323434 MT1HL1P0DM35 61 aa7.83□□□□□ -1.16
RPH3AL-201ENST00000323434 KRTAP10-6P60371 365 aaPredicted RBP7.82□□□□□ -1.16
RPH3AL-201ENST00000323434 K7ERS5 55 aa7.81□□□□□ -1.16
RPH3AL-201ENST00000323434 KRTAP13-4Q3LI77 160 aa7.79□□□□□ -1.16
RPH3AL-201ENST00000323434 EPPK1P58107 5090 aaKnown RBP7.79□□□□□ -1.16
RPH3AL-201ENST00000323434 H3BS24 57 aa7.77□□□□□ -1.17
RPH3AL-201ENST00000323434 ROMO1P60602 79 aa7.77□□□□□ -1.17
RPH3AL-201ENST00000323434 KRTAP3-2Q9BYR7 98 aa7.75□□□□□ -1.17
RPH3AL-201ENST00000323434 LPAP08519 4548 aa7.74□□□□□ -1.17
RPH3AL-201ENST00000323434 S4R3F8 94 aa7.72□□□□□ -1.17
RPH3AL-201ENST00000323434 A0A0D9SG42 100 aa7.71□□□□□ -1.18
RPH3AL-201ENST00000323434 LRP2P98164 4655 aa7.71□□□□□ -1.18
RPH3AL-201ENST00000323434 ABCA13Q86UQ4 5058 aa7.65□□□□□ -1.18
RPH3AL-201ENST00000323434 P0C880 135 aa7.64□□□□□ -1.19
RPH3AL-201ENST00000323434 TPRXLQ17RH7 258 aa7.62□□□□□ -1.19
RPH3AL-201ENST00000323434 KRTAP4-5Q9BYR2 181 aa7.62□□□□□ -1.19
RPH3AL-201ENST00000323434 C10orf95Q9H7T3 257 aa7.55□□□□□ -1.2
RPH3AL-201ENST00000323434 KRTAP12-2P59991 146 aa7.54□□□□□ -1.2
RPH3AL-201ENST00000323434 KRTAP12-1P59990 96 aa7.46□□□□□ -1.22
RPH3AL-201ENST00000323434 SPINT4Q6UDR6 99 aa7.44□□□□□ -1.22
RPH3AL-201ENST00000323434 HERC2O95714 4834 aa7.35□□□□□ -1.23
RPH3AL-201ENST00000323434 SEC61BP60468 96 aaKnown RBP7.34□□□□□ -1.23
RPH3AL-201ENST00000323434 KRTAP15-1Q3LI76 137 aa7.34□□□□□ -1.23
RPH3AL-201ENST00000323434 A0A0A0MQY5 61 aa7.32□□□□□ -1.24
RPH3AL-201ENST00000323434 M0QZ58 72 aa7.32□□□□□ -1.24
RPH3AL-201ENST00000323434 KRTAP4-1Q9BYQ7 146 aa7.29□□□□□ -1.24
RPH3AL-201ENST00000323434 MUC17Q685J3 4493 aa7.28□□□□□ -1.24
RPH3AL-201ENST00000323434 MUC2Q02817 5179 aa7.2□□□□□ -1.26
RPH3AL-201ENST00000323434 NDUFAF8A1L188 74 aa7.2□□□□□ -1.26
RPH3AL-201ENST00000323434 R4GN34 69 aa7.19□□□□□ -1.26
RPH3AL-201ENST00000323434 LORP23490 312 aaPredicted RBP7.14□□□□□ -1.27
RPH3AL-201ENST00000323434 BIRC6Q9NR09 4857 aa7.1□□□□□ -1.27
RPH3AL-201ENST00000323434 KRTAP19-2Q3LHN2 52 aa7.07□□□□□ -1.28
RPH3AL-201ENST00000323434 HERC1Q15751 4861 aa7.05□□□□□ -1.28
RPH3AL-201ENST00000323434 PCLOQ9Y6V0 5065 aa7□□□□□ -1.29
RPH3AL-201ENST00000323434 HMCN2Q8NDA2 5059 aa6.91□□□□□ -1.3
RPH3AL-201ENST00000323434 FLGP20930 4061 aaPredicted RBP6.91□□□□□ -1.3
RPH3AL-201ENST00000323434 PLAC4Q8WY50 150 aa6.9□□□□□ -1.31
RPH3AL-201ENST00000323434 FAT4Q6V0I7 4981 aa6.85□□□□□ -1.31
RPH3AL-201ENST00000323434 CAMK2N1Q7Z7J9 78 aa6.83□□□□□ -1.32
RPH3AL-201ENST00000323434 LCE2DQ5TA82 110 aaPredicted RBP6.75□□□□□ -1.33
RPH3AL-201ENST00000323434 PP632Q6XCG6 107 aa6.73□□□□□ -1.33
RPH3AL-201ENST00000323434 RNF213Q63HN8 5207 aa6.73□□□□□ -1.33
RPH3AL-201ENST00000323434 LCE2CQ5TA81 110 aa6.72□□□□□ -1.33
RPH3AL-201ENST00000323434 UBR4Q5T4S7 5183 aa6.7□□□□□ -1.34
RPH3AL-201ENST00000323434 M0R2T5 61 aa6.67□□□□□ -1.34
RPH3AL-201ENST00000323434 LUZP6Q538Z0 58 aa6.56□□□□□ -1.36
RPH3AL-201ENST00000323434 MT1HP80294 61 aa6.56□□□□□ -1.36
RPH3AL-201ENST00000323434 TNP1P09430 55 aa6.54□□□□□ -1.36
RPH3AL-201ENST00000323434 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
RPH3AL-201ENST00000323434 SPRR2GQ9BYE4 73 aa6.5□□□□□ -1.37
RPH3AL-201ENST00000323434 KRTAP23-1A1A580 65 aa6.48□□□□□ -1.37
RPH3AL-201ENST00000323434 KRTAP10-10P60014 251 aa6.48□□□□□ -1.37
RPH3AL-201ENST00000323434 MT1FP04733 61 aa6.44□□□□□ -1.38
RPH3AL-201ENST00000323434 MT2AP02795 61 aa6.43□□□□□ -1.38
RPH3AL-201ENST00000323434 SPRR5A0A1B0GTR4 108 aa6.43□□□□□ -1.38
RPH3AL-201ENST00000323434 KRTAP9-8Q9BYQ0 159 aa6.39□□□□□ -1.39
RPH3AL-201ENST00000323434 LCE3AQ5TA76 89 aa6.23□□□□□ -1.41
RPH3AL-201ENST00000323434 KRTAP19-8Q3LI54 63 aa6.21□□□□□ -1.42
RPH3AL-201ENST00000323434 MT1BP07438 61 aa6.18□□□□□ -1.42
RPH3AL-201ENST00000323434 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
RPH3AL-201ENST00000323434 MT1XP80297 61 aa6.12□□□□□ -1.43
RPH3AL-201ENST00000323434 KRTAP9-3Q9BYQ3 159 aa6.12□□□□□ -1.43
RPH3AL-201ENST00000323434 LCE2BO14633 110 aa6.07□□□□□ -1.44
RPH3AL-201ENST00000323434 LCE2AQ5TA79 106 aaPredicted RBP6.06□□□□□ -1.44
RPH3AL-201ENST00000323434 KRTAP8-1Q8IUC2 63 aa6.05□□□□□ -1.44
RPH3AL-201ENST00000323434 KRTAP10-12P60413 245 aa5.98□□□□□ -1.45
RPH3AL-201ENST00000323434 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
RPH3AL-201ENST00000323434 USH2AO75445 5202 aa5.98□□□□□ -1.45
RPH3AL-201ENST00000323434 PRO2289Q9P1D8 64 aa5.91□□□□□ -1.46
RPH3AL-201ENST00000323434 KRTAP12-3P60328 96 aa5.9□□□□□ -1.46
RPH3AL-201ENST00000323434 KMT2DO14686 5537 aa5.81□□□□□ -1.48
RPH3AL-201ENST00000323434 INE1O15225 51 aa5.73□□□□□ -1.49
RPH3AL-201ENST00000323434 KRTAP19-5Q3LI72 72 aa5.71□□□□□ -1.5
RPH3AL-201ENST00000323434 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
RPH3AL-201ENST00000323434 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
RPH3AL-201ENST00000323434 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
RPH3AL-201ENST00000323434 FSIP2Q5CZC0 6907 aa5.52□□□□□ -1.53
RPH3AL-201ENST00000323434 SSPOA2VEC9 5147 aa5.48□□□□□ -1.53
RPH3AL-201ENST00000323434 KRTAP9-6A8MVA2 160 aa5.45□□□□□ -1.54
RPH3AL-201ENST00000323434 KRTAP19-7Q3SYF9 63 aa5.45□□□□□ -1.54
RPH3AL-201ENST00000323434 KRTAP4-7Q9BYR0 210 aa5.39□□□□□ -1.55
RPH3AL-201ENST00000323434 MT1EP04732 61 aa5.3□□□□□ -1.56
RPH3AL-201ENST00000323434 MT1LQ93083 61 aa5.29□□□□□ -1.56
RPH3AL-201ENST00000323434 KRTAP2-3P0C7H8 128 aa5.28□□□□□ -1.56
RPH3AL-201ENST00000323434 KRTAP19-6Q3LI70 58 aa5.28□□□□□ -1.56
RPH3AL-201ENST00000323434 KRTAP2-4Q9BYR9 128 aa5.28□□□□□ -1.56
RPH3AL-201ENST00000323434 KRTAP2-1Q9BYU5 128 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms