RNA–Protein interactions for RNA: ENST00000320493.9

CFHR1-201, Transcript of complement factor H related 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFHR1, Length 1,271 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-201ENST00000320493 SPINK4O60575 86 aa1.58□□□□□ -2.16
CFHR1-201ENST00000320493 MINOS1Q5TGZ0 78 aa1.58□□□□□ -2.16
CFHR1-201ENST00000320493 DEFB105AQ8NG35 78 aa1.58□□□□□ -2.16
CFHR1-201ENST00000320493 STAB2Q8WWQ8 2551 aa1.58□□□□□ -2.16
CFHR1-201ENST00000320493 NEBP20929 6669 aa1.57□□□□□ -2.16
CFHR1-201ENST00000320493 AKAP6Q13023 2319 aa1.57□□□□□ -2.16
CFHR1-201ENST00000320493 H0YAA0 97 aa1.57□□□□□ -2.16
CFHR1-201ENST00000320493 LINC00308Q8TCZ7 52 aa1.57□□□□□ -2.16
CFHR1-201ENST00000320493 APLNQ9ULZ1 77 aa1.57□□□□□ -2.16
CFHR1-201ENST00000320493 FCGBPQ9Y6R7 5405 aaPredicted RBP1.57□□□□□ -2.16
CFHR1-201ENST00000320493 SPRR1BP22528 89 aa1.55□□□□□ -2.16
CFHR1-201ENST00000320493 H1FX-AS1Q4G0G2 97 aa1.55□□□□□ -2.16
CFHR1-201ENST00000320493 C6orf48Q9UBA6 75 aa1.55□□□□□ -2.16
CFHR1-201ENST00000320493 DMBT1Q9UGM3 2413 aaPredicted RBP1.54□□□□□ -2.16
CFHR1-201ENST00000320493 WFDC13Q8IUB5 93 aa1.54□□□□□ -2.16
CFHR1-201ENST00000320493 SMR3AQ99954 134 aa1.54□□□□□ -2.16
CFHR1-201ENST00000320493 SYNE2Q8WXH0 6885 aaKnown RBP1.53□□□□□ -2.16
CFHR1-201ENST00000320493 KNL1Q8NG31 2342 aa1.52□□□□□ -2.17
CFHR1-201ENST00000320493 PKHD1P08F94 4074 aa1.52□□□□□ -2.17
CFHR1-201ENST00000320493 PRB3Q04118 309 aaPredicted RBP1.52□□□□□ -2.17
CFHR1-201ENST00000320493 LELP1Q5T871 98 aa1.52□□□□□ -2.17
CFHR1-201ENST00000320493 USF3Q68DE3 2245 aa1.52□□□□□ -2.17
CFHR1-201ENST00000320493 HSPG2P98160 4391 aa1.51□□□□□ -2.17
CFHR1-201ENST00000320493 IAPPP10997 89 aa1.51□□□□□ -2.17
CFHR1-201ENST00000320493 SNRPGP62308 76 aaKnown RBP1.51□□□□□ -2.17
CFHR1-201ENST00000320493 MYCBP2O75592 4640 aa1.5□□□□□ -2.17
CFHR1-201ENST00000320493 SRRM2Q9UQ35 2752 aaKnown RBP1.5□□□□□ -2.17
CFHR1-201ENST00000320493 DNAH10Q8IVF4 4471 aa1.5□□□□□ -2.17
CFHR1-201ENST00000320493 FAT2Q9NYQ8 4349 aa1.5□□□□□ -2.17
CFHR1-201ENST00000320493 SMIM2Q9BVW6 85 aa1.5□□□□□ -2.17
CFHR1-201ENST00000320493 DNAH9Q9NYC9 4486 aa1.5□□□□□ -2.17
CFHR1-201ENST00000320493 DYNC1H1Q14204 4646 aaKnown RBP1.5□□□□□ -2.17
CFHR1-201ENST00000320493 WNK2Q9Y3S1 2297 aa1.5□□□□□ -2.17
CFHR1-201ENST00000320493 DNAH7Q8WXX0 4024 aa1.49□□□□□ -2.17
CFHR1-201ENST00000320493 SSPOA2VEC9 5147 aa1.48□□□□□ -2.17
CFHR1-201ENST00000320493 HUWE1Q7Z6Z7 4374 aaKnown RBP1.47□□□□□ -2.17
CFHR1-201ENST00000320493 DEFB130BP0DP73 79 aa1.47□□□□□ -2.17
CFHR1-201ENST00000320493 DEFB130AP0DP74 79 aa1.47□□□□□ -2.17
CFHR1-201ENST00000320493 MACF1Q9UPN3 7388 aaKnown RBP1.46□□□□□ -2.18
CFHR1-201ENST00000320493 PLECQ15149 4684 aaKnown RBP1.46□□□□□ -2.18
CFHR1-201ENST00000320493 RPS27P42677 84 aaKnown RBP1.45□□□□□ -2.18
CFHR1-201ENST00000320493 RPS27LQ71UM5 84 aaKnown RBP1.45□□□□□ -2.18
CFHR1-201ENST00000320493 NDUFA1O15239 70 aa1.44□□□□□ -2.18
CFHR1-201ENST00000320493 TFF3Q07654 80 aa1.44□□□□□ -2.18
CFHR1-201ENST00000320493 KLK9Q2XQG4 91 aa1.44□□□□□ -2.18
CFHR1-201ENST00000320493 FAT1Q14517 4588 aa1.44□□□□□ -2.18
CFHR1-201ENST00000320493 STARD9Q9P2P6 4700 aa1.43□□□□□ -2.18
CFHR1-201ENST00000320493 DNAH11Q96DT5 4516 aa1.42□□□□□ -2.18
CFHR1-201ENST00000320493 H3BUA1 57 aa1.41□□□□□ -2.18
CFHR1-201ENST00000320493 DNAH3Q8TD57 4116 aa1.41□□□□□ -2.18
CFHR1-201ENST00000320493 LRP2P98164 4655 aa1.4□□□□□ -2.18
CFHR1-201ENST00000320493 WT1-ASQ06250 92 aa1.4□□□□□ -2.19
CFHR1-201ENST00000320493 APOBP04114 4563 aaKnown RBP1.4□□□□□ -2.19
CFHR1-201ENST00000320493 VPS13DQ5THJ4 4388 aa1.39□□□□□ -2.19
CFHR1-201ENST00000320493 PKD1P98161 4303 aa1.39□□□□□ -2.19
CFHR1-201ENST00000320493 Q9Y3F1 56 aa1.38□□□□□ -2.19
CFHR1-201ENST00000320493 LRP1BQ9NZR2 4599 aa1.38□□□□□ -2.19
CFHR1-201ENST00000320493 ALMS1Q8TCU4 4167 aa1.38□□□□□ -2.19
CFHR1-201ENST00000320493 FAT3Q8TDW7 4589 aa1.38□□□□□ -2.19
CFHR1-201ENST00000320493 DNAH6Q9C0G6 4158 aa1.37□□□□□ -2.19
CFHR1-201ENST00000320493 DEFB109BQ30KR1 87 aa1.37□□□□□ -2.19
CFHR1-201ENST00000320493 HRNRQ86YZ3 2850 aaPredicted RBP1.36□□□□□ -2.19
CFHR1-201ENST00000320493 PKHD1L1Q86WI1 4243 aa1.36□□□□□ -2.19
CFHR1-201ENST00000320493 CD52P31358 61 aa1.36□□□□□ -2.19
CFHR1-201ENST00000320493 DNAH2Q9P225 4427 aa1.35□□□□□ -2.19
CFHR1-201ENST00000320493 WFDC10BQ8IUB3 73 aa1.35□□□□□ -2.19
CFHR1-201ENST00000320493 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.2
CFHR1-201ENST00000320493 DNAH5Q8TE73 4624 aa1.33□□□□□ -2.2
CFHR1-201ENST00000320493 KRTAP20-1Q3LI63 56 aa1.33□□□□□ -2.2
CFHR1-201ENST00000320493 LRP1Q07954 4544 aaKnown RBP1.33□□□□□ -2.2
CFHR1-201ENST00000320493 USH2AO75445 5202 aa1.33□□□□□ -2.2
CFHR1-201ENST00000320493 DEFB131AP59861 70 aa1.32□□□□□ -2.2
CFHR1-201ENST00000320493 KAAG1Q9UBP8 84 aa1.32□□□□□ -2.2
CFHR1-201ENST00000320493 MUC12Q9UKN1 5478 aa1.32□□□□□ -2.2
CFHR1-201ENST00000320493 KMT2DO14686 5537 aa1.31□□□□□ -2.2
CFHR1-201ENST00000320493 IGLV5-48A0A075B6I7 105 aa1.31□□□□□ -2.2
CFHR1-201ENST00000320493 S4R3F8 94 aa1.31□□□□□ -2.2
CFHR1-201ENST00000320493 DNAH17Q9UFH2 4485 aa1.31□□□□□ -2.2
CFHR1-201ENST00000320493 VPS13BQ7Z7G8 4022 aa1.29□□□□□ -2.2
CFHR1-201ENST00000320493 SPINK6Q6UWN8 80 aa1.28□□□□□ -2.2
CFHR1-201ENST00000320493 DEFB106AQ8N104 65 aa1.28□□□□□ -2.2
CFHR1-201ENST00000320493 PRLHP81277 87 aa1.27□□□□□ -2.21
CFHR1-201ENST00000320493 NOP10Q9NPE3 64 aaKnown RBP1.27□□□□□ -2.21
CFHR1-201ENST00000320493 AHNAKQ09666 5890 aaKnown RBP1.26□□□□□ -2.21
CFHR1-201ENST00000320493 TNXBP22105 4242 aa1.25□□□□□ -2.21
CFHR1-201ENST00000320493 U3KQA8 63 aa1.24□□□□□ -2.21
CFHR1-201ENST00000320493 DSTQ03001 7570 aaKnown RBP1.24□□□□□ -2.21
CFHR1-201ENST00000320493 MMP24-AS1A0A0U1RRL7 71 aa1.23□□□□□ -2.21
CFHR1-201ENST00000320493 H0YGG7 62 aa1.22□□□□□ -2.21
CFHR1-201ENST00000320493 SPINK1P00995 79 aa1.21□□□□□ -2.22
CFHR1-201ENST00000320493 DEFB133Q30KQ1 61 aa1.2□□□□□ -2.22
CFHR1-201ENST00000320493 LPAP08519 4548 aa1.19□□□□□ -2.22
CFHR1-201ENST00000320493 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
CFHR1-201ENST00000320493 STATHP02808 62 aa1.19□□□□□ -2.22
CFHR1-201ENST00000320493 DEFB135Q30KP9 77 aa1.19□□□□□ -2.22
CFHR1-201ENST00000320493 POLR2KP53803 58 aaKnown RBP1.18□□□□□ -2.22
CFHR1-201ENST00000320493 MDN1Q9NU22 5596 aa1.18□□□□□ -2.22
CFHR1-201ENST00000320493 KRTAP19-3Q7Z4W3 81 aa1.17□□□□□ -2.22
CFHR1-201ENST00000320493 M0R2T5 61 aa1.16□□□□□ -2.22
CFHR1-201ENST00000320493 KRTAP2-3P0C7H8 128 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms