RNA–Protein interactions for RNA: ENST00000319406.8

LCLAT1-202, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2 BASIC

Gene LCLAT1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-202ENST00000319406 KRTAP3-1Q9BYR8 98 aa5.44□□□□□ -1.54
LCLAT1-202ENST00000319406 RYR3Q15413 4870 aa5.43□□□□□ -1.54
LCLAT1-202ENST00000319406 RYR1P21817 5038 aa5.42□□□□□ -1.54
LCLAT1-202ENST00000319406 C9orf92A6NGG3 77 aa5.41□□□□□ -1.54
LCLAT1-202ENST00000319406 COX6B2Q6YFQ2 88 aa5.36□□□□□ -1.55
LCLAT1-202ENST00000319406 KRTAP10-8P60410 259 aa5.35□□□□□ -1.55
LCLAT1-202ENST00000319406 TPRXLQ17RH7 258 aa5.33□□□□□ -1.56
LCLAT1-202ENST00000319406 KRTAP17-1Q9BYP8 105 aa5.33□□□□□ -1.56
LCLAT1-202ENST00000319406 K7ERS5 55 aa5.32□□□□□ -1.56
LCLAT1-202ENST00000319406 Q5VSD8 79 aa5.31□□□□□ -1.56
LCLAT1-202ENST00000319406 SPINT4Q6UDR6 99 aa5.29□□□□□ -1.56
LCLAT1-202ENST00000319406 MYCBP2O75592 4640 aa5.29□□□□□ -1.56
LCLAT1-202ENST00000319406 KIAA1109Q2LD37 5005 aa5.29□□□□□ -1.56
LCLAT1-202ENST00000319406 C10orf95Q9H7T3 257 aa5.27□□□□□ -1.57
LCLAT1-202ENST00000319406 KRTAP13-4Q3LI77 160 aa5.27□□□□□ -1.57
LCLAT1-202ENST00000319406 NDUFAF8A1L188 74 aa5.26□□□□□ -1.57
LCLAT1-202ENST00000319406 KRTAP15-1Q3LI76 137 aa5.25□□□□□ -1.57
LCLAT1-202ENST00000319406 RPL37P61927 97 aaKnown RBP5.24□□□□□ -1.57
LCLAT1-202ENST00000319406 KRTAP10-6P60371 365 aaPredicted RBP5.24□□□□□ -1.57
LCLAT1-202ENST00000319406 DMBT1Q9UGM3 2413 aaPredicted RBP5.23□□□□□ -1.57
LCLAT1-202ENST00000319406 A0A0D9SG42 100 aa5.22□□□□□ -1.57
LCLAT1-202ENST00000319406 MT1HL1P0DM35 61 aa5.22□□□□□ -1.57
LCLAT1-202ENST00000319406 EPPK1P58107 5090 aaKnown RBP5.21□□□□□ -1.57
LCLAT1-202ENST00000319406 XP32Q5T750 250 aa5.21□□□□□ -1.58
LCLAT1-202ENST00000319406 KRTAP3-3Q9BYR6 98 aa5.17□□□□□ -1.58
LCLAT1-202ENST00000319406 KRTAP3-2Q9BYR7 98 aa5.17□□□□□ -1.58
LCLAT1-202ENST00000319406 LPAP08519 4548 aa5.12□□□□□ -1.59
LCLAT1-202ENST00000319406 LRP2P98164 4655 aa5.11□□□□□ -1.59
LCLAT1-202ENST00000319406 KRTAP12-2P59991 146 aa5.1□□□□□ -1.59
LCLAT1-202ENST00000319406 S4R3F8 94 aa5.1□□□□□ -1.59
LCLAT1-202ENST00000319406 ABCA13Q86UQ4 5058 aa5.08□□□□□ -1.6
LCLAT1-202ENST00000319406 KRTAP4-5Q9BYR2 181 aa5.02□□□□□ -1.61
LCLAT1-202ENST00000319406 KRTAP12-1P59990 96 aa5.02□□□□□ -1.61
LCLAT1-202ENST00000319406 A0A0A0MQY5 61 aa4.97□□□□□ -1.61
LCLAT1-202ENST00000319406 J3QL48 77 aa4.96□□□□□ -1.62
LCLAT1-202ENST00000319406 LCE2DQ5TA82 110 aaPredicted RBP4.94□□□□□ -1.62
LCLAT1-202ENST00000319406 HERC2O95714 4834 aa4.93□□□□□ -1.62
LCLAT1-202ENST00000319406 MUC17Q685J3 4493 aa4.93□□□□□ -1.62
LCLAT1-202ENST00000319406 BIRC6Q9NR09 4857 aa4.86□□□□□ -1.63
LCLAT1-202ENST00000319406 KRTAP4-1Q9BYQ7 146 aa4.83□□□□□ -1.64
LCLAT1-202ENST00000319406 LUZP6Q538Z0 58 aa4.82□□□□□ -1.64
LCLAT1-202ENST00000319406 PLAC4Q8WY50 150 aa4.82□□□□□ -1.64
LCLAT1-202ENST00000319406 M0QZ58 72 aa4.82□□□□□ -1.64
LCLAT1-202ENST00000319406 SEC61BP60468 96 aaKnown RBP4.81□□□□□ -1.64
LCLAT1-202ENST00000319406 KRTAP19-2Q3LHN2 52 aa4.8□□□□□ -1.64
LCLAT1-202ENST00000319406 PCLOQ9Y6V0 5065 aa4.75□□□□□ -1.65
LCLAT1-202ENST00000319406 FLGP20930 4061 aaPredicted RBP4.7□□□□□ -1.66
LCLAT1-202ENST00000319406 HMCN2Q8NDA2 5059 aa4.69□□□□□ -1.66
LCLAT1-202ENST00000319406 MUC2Q02817 5179 aa4.69□□□□□ -1.66
LCLAT1-202ENST00000319406 LORP23490 312 aaPredicted RBP4.67□□□□□ -1.66
LCLAT1-202ENST00000319406 HERC1Q15751 4861 aa4.67□□□□□ -1.66
LCLAT1-202ENST00000319406 R4GN34 69 aa4.65□□□□□ -1.67
LCLAT1-202ENST00000319406 PP632Q6XCG6 107 aa4.53□□□□□ -1.68
LCLAT1-202ENST00000319406 LCE2CQ5TA81 110 aa4.51□□□□□ -1.69
LCLAT1-202ENST00000319406 FAT4Q6V0I7 4981 aa4.5□□□□□ -1.69
LCLAT1-202ENST00000319406 CAMK2N1Q7Z7J9 78 aa4.45□□□□□ -1.7
LCLAT1-202ENST00000319406 RNF213Q63HN8 5207 aa4.44□□□□□ -1.7
LCLAT1-202ENST00000319406 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
LCLAT1-202ENST00000319406 UBR4Q5T4S7 5183 aa4.43□□□□□ -1.7
LCLAT1-202ENST00000319406 LOC100996750A0A140TA64 210 aa4.36□□□□□ -1.71
LCLAT1-202ENST00000319406 KRTAP4-6Q9BYQ5 205 aa4.36□□□□□ -1.71
LCLAT1-202ENST00000319406 MT1HP80294 61 aa4.36□□□□□ -1.71
LCLAT1-202ENST00000319406 SPRR2GQ9BYE4 73 aa4.35□□□□□ -1.71
LCLAT1-202ENST00000319406 KRTAP19-1Q8IUB9 90 aa4.34□□□□□ -1.72
LCLAT1-202ENST00000319406 TNP1P09430 55 aa4.31□□□□□ -1.72
LCLAT1-202ENST00000319406 KRTAP23-1A1A580 65 aa4.29□□□□□ -1.72
LCLAT1-202ENST00000319406 MT2AP02795 61 aa4.27□□□□□ -1.73
LCLAT1-202ENST00000319406 MT1FP04733 61 aa4.27□□□□□ -1.73
LCLAT1-202ENST00000319406 KRTAP9-8Q9BYQ0 159 aa4.27□□□□□ -1.73
LCLAT1-202ENST00000319406 PRO2289Q9P1D8 64 aa4.25□□□□□ -1.73
LCLAT1-202ENST00000319406 M0R2T5 61 aa4.24□□□□□ -1.73
LCLAT1-202ENST00000319406 LCE2BO14633 110 aa4.21□□□□□ -1.73
LCLAT1-202ENST00000319406 KRTAP19-8Q3LI54 63 aa4.19□□□□□ -1.74
LCLAT1-202ENST00000319406 KRTAP10-10P60014 251 aa4.18□□□□□ -1.74
LCLAT1-202ENST00000319406 LCE2AQ5TA79 106 aaPredicted RBP4.15□□□□□ -1.74
LCLAT1-202ENST00000319406 MT1BP07438 61 aa4.13□□□□□ -1.75
LCLAT1-202ENST00000319406 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
LCLAT1-202ENST00000319406 INE1O15225 51 aa4.11□□□□□ -1.75
LCLAT1-202ENST00000319406 KRTAP9-3Q9BYQ3 159 aa4.1□□□□□ -1.75
LCLAT1-202ENST00000319406 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
LCLAT1-202ENST00000319406 MT1XP80297 61 aa4.07□□□□□ -1.76
LCLAT1-202ENST00000319406 KRTAP8-1Q8IUC2 63 aa3.99□□□□□ -1.77
LCLAT1-202ENST00000319406 FSIP2Q5CZC0 6907 aa3.96□□□□□ -1.77
LCLAT1-202ENST00000319406 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
LCLAT1-202ENST00000319406 KRTAP10-12P60413 245 aa3.91□□□□□ -1.78
LCLAT1-202ENST00000319406 KRTAP12-3P60328 96 aa3.87□□□□□ -1.79
LCLAT1-202ENST00000319406 USH2AO75445 5202 aa3.87□□□□□ -1.79
LCLAT1-202ENST00000319406 KRTAP5-3Q6L8H2 238 aa3.81□□□□□ -1.8
LCLAT1-202ENST00000319406 KMT2DO14686 5537 aa3.75□□□□□ -1.81
LCLAT1-202ENST00000319406 KRTAP19-5Q3LI72 72 aa3.74□□□□□ -1.81
LCLAT1-202ENST00000319406 KRTAP4-8A0A0G2JLE6 195 aa3.69□□□□□ -1.82
LCLAT1-202ENST00000319406 KRTAP4-8Q9BYQ9 185 aa3.69□□□□□ -1.82
LCLAT1-202ENST00000319406 SSPOA2VEC9 5147 aa3.68□□□□□ -1.82
LCLAT1-202ENST00000319406 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
LCLAT1-202ENST00000319406 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
LCLAT1-202ENST00000319406 KRTAP9-2Q9BYQ4 174 aa3.66□□□□□ -1.82
LCLAT1-202ENST00000319406 KRTAP19-7Q3SYF9 63 aa3.64□□□□□ -1.83
LCLAT1-202ENST00000319406 KRTAP2-3P0C7H8 128 aa3.58□□□□□ -1.84
LCLAT1-202ENST00000319406 KRTAP2-4Q9BYR9 128 aa3.58□□□□□ -1.84
LCLAT1-202ENST00000319406 KRTAP2-1Q9BYU5 128 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 407.5 ms