RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 FAT3Q8TDW7 4589 aa7.09□□□□□ -1.27
MKS1-201ENST00000313863 KRTAP10-8P60410 259 aa7.09□□□□□ -1.27
MKS1-201ENST00000313863 KRTAP3-2Q9BYR7 98 aa7.05□□□□□ -1.28
MKS1-201ENST00000313863 DMBT1Q9UGM3 2413 aaPredicted RBP7.05□□□□□ -1.28
MKS1-201ENST00000313863 XP32Q5T750 250 aa7.04□□□□□ -1.28
MKS1-201ENST00000313863 TNXBP22105 4242 aa7.04□□□□□ -1.28
MKS1-201ENST00000313863 A0A0D9SG42 100 aa7.03□□□□□ -1.28
MKS1-201ENST00000313863 KRTAP13-4Q3LI77 160 aa7.03□□□□□ -1.28
MKS1-201ENST00000313863 CRIPTQ9P021 101 aa7.03□□□□□ -1.28
MKS1-201ENST00000313863 P0C880 135 aa7.01□□□□□ -1.29
MKS1-201ENST00000313863 RYR2Q92736 4967 aa6.98□□□□□ -1.29
MKS1-201ENST00000313863 Q5VSD8 79 aa6.97□□□□□ -1.29
MKS1-201ENST00000313863 LRP1Q07954 4544 aaKnown RBP6.97□□□□□ -1.29
MKS1-201ENST00000313863 HSPG2P98160 4391 aa6.95□□□□□ -1.3
MKS1-201ENST00000313863 TPRXLQ17RH7 258 aa6.89□□□□□ -1.31
MKS1-201ENST00000313863 SPINT4Q6UDR6 99 aa6.88□□□□□ -1.31
MKS1-201ENST00000313863 M0QZ58 72 aa6.86□□□□□ -1.31
MKS1-201ENST00000313863 KRTAP12-2P59991 146 aa6.85□□□□□ -1.31
MKS1-201ENST00000313863 KRTAP12-1P59990 96 aa6.82□□□□□ -1.32
MKS1-201ENST00000313863 KRTAP15-1Q3LI76 137 aa6.81□□□□□ -1.32
MKS1-201ENST00000313863 KMT2CQ8NEZ4 4911 aaKnown RBP6.81□□□□□ -1.32
MKS1-201ENST00000313863 MYCBP2O75592 4640 aa6.78□□□□□ -1.32
MKS1-201ENST00000313863 C10orf95Q9H7T3 257 aa6.78□□□□□ -1.32
MKS1-201ENST00000313863 MT1HL1P0DM35 61 aa6.78□□□□□ -1.32
MKS1-201ENST00000313863 RYR1P21817 5038 aa6.76□□□□□ -1.33
MKS1-201ENST00000313863 KRTAP17-1Q9BYP8 105 aa6.67□□□□□ -1.34
MKS1-201ENST00000313863 NDUFAF8A1L188 74 aa6.65□□□□□ -1.35
MKS1-201ENST00000313863 R4GN34 69 aa6.61□□□□□ -1.35
MKS1-201ENST00000313863 RYR3Q15413 4870 aa6.59□□□□□ -1.35
MKS1-201ENST00000313863 LRP2P98164 4655 aa6.58□□□□□ -1.36
MKS1-201ENST00000313863 SEC61BP60468 96 aaKnown RBP6.56□□□□□ -1.36
MKS1-201ENST00000313863 KIAA1109Q2LD37 5005 aa6.55□□□□□ -1.36
MKS1-201ENST00000313863 LPAP08519 4548 aa6.55□□□□□ -1.36
MKS1-201ENST00000313863 A0A0A0MQY5 61 aa6.43□□□□□ -1.38
MKS1-201ENST00000313863 MUC17Q685J3 4493 aa6.38□□□□□ -1.39
MKS1-201ENST00000313863 PP632Q6XCG6 107 aa6.38□□□□□ -1.39
MKS1-201ENST00000313863 PLAC4Q8WY50 150 aa6.37□□□□□ -1.39
MKS1-201ENST00000313863 BIRC6Q9NR09 4857 aa6.35□□□□□ -1.39
MKS1-201ENST00000313863 LORP23490 312 aaPredicted RBP6.35□□□□□ -1.39
MKS1-201ENST00000313863 EPPK1P58107 5090 aaKnown RBP6.34□□□□□ -1.39
MKS1-201ENST00000313863 ABCA13Q86UQ4 5058 aa6.31□□□□□ -1.4
MKS1-201ENST00000313863 CAMK2N1Q7Z7J9 78 aa6.3□□□□□ -1.4
MKS1-201ENST00000313863 KRTAP4-5Q9BYR2 181 aa6.3□□□□□ -1.4
MKS1-201ENST00000313863 KRTAP4-1Q9BYQ7 146 aa6.28□□□□□ -1.4
MKS1-201ENST00000313863 KRTAP19-2Q3LHN2 52 aa6.26□□□□□ -1.41
MKS1-201ENST00000313863 J3QL48 77 aa6.26□□□□□ -1.41
MKS1-201ENST00000313863 LUZP6Q538Z0 58 aa6.18□□□□□ -1.42
MKS1-201ENST00000313863 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
MKS1-201ENST00000313863 TNP1P09430 55 aa6.11□□□□□ -1.43
MKS1-201ENST00000313863 FLGP20930 4061 aaPredicted RBP6.11□□□□□ -1.43
MKS1-201ENST00000313863 HERC2O95714 4834 aa6.1□□□□□ -1.43
MKS1-201ENST00000313863 PCLOQ9Y6V0 5065 aa6.03□□□□□ -1.44
MKS1-201ENST00000313863 HERC1Q15751 4861 aa6.01□□□□□ -1.45
MKS1-201ENST00000313863 SPRR5A0A1B0GTR4 108 aa5.97□□□□□ -1.45
MKS1-201ENST00000313863 SPRR2GQ9BYE4 73 aa5.88□□□□□ -1.47
MKS1-201ENST00000313863 MUC2Q02817 5179 aa5.84□□□□□ -1.47
MKS1-201ENST00000313863 LCE2CQ5TA81 110 aa5.82□□□□□ -1.48
MKS1-201ENST00000313863 KRTAP19-1Q8IUB9 90 aa5.77□□□□□ -1.49
MKS1-201ENST00000313863 HMCN2Q8NDA2 5059 aa5.75□□□□□ -1.49
MKS1-201ENST00000313863 M0R2T5 61 aa5.74□□□□□ -1.49
MKS1-201ENST00000313863 LCE3AQ5TA76 89 aa5.68□□□□□ -1.5
MKS1-201ENST00000313863 MT1HP80294 61 aa5.65□□□□□ -1.51
MKS1-201ENST00000313863 KRTAP10-10P60014 251 aa5.64□□□□□ -1.51
MKS1-201ENST00000313863 MT2AP02795 61 aa5.6□□□□□ -1.51
MKS1-201ENST00000313863 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
MKS1-201ENST00000313863 KRTAP8-1Q8IUC2 63 aa5.6□□□□□ -1.51
MKS1-201ENST00000313863 FAT4Q6V0I7 4981 aa5.59□□□□□ -1.52
MKS1-201ENST00000313863 MT1FP04733 61 aa5.59□□□□□ -1.52
MKS1-201ENST00000313863 PRO2289Q9P1D8 64 aa5.57□□□□□ -1.52
MKS1-201ENST00000313863 KRTAP9-8Q9BYQ0 159 aa5.55□□□□□ -1.52
MKS1-201ENST00000313863 INE1O15225 51 aa5.5□□□□□ -1.53
MKS1-201ENST00000313863 RNF213Q63HN8 5207 aa5.48□□□□□ -1.53
MKS1-201ENST00000313863 KRTAP10-5P60370 271 aa5.47□□□□□ -1.53
MKS1-201ENST00000313863 KRTAP10-12P60413 245 aa5.46□□□□□ -1.54
MKS1-201ENST00000313863 MT1BP07438 61 aa5.45□□□□□ -1.54
MKS1-201ENST00000313863 MT1XP80297 61 aa5.45□□□□□ -1.54
MKS1-201ENST00000313863 KRTAP12-3P60328 96 aa5.44□□□□□ -1.54
MKS1-201ENST00000313863 UBR4Q5T4S7 5183 aa5.4□□□□□ -1.55
MKS1-201ENST00000313863 KRTAP9-3Q9BYQ3 159 aa5.32□□□□□ -1.56
MKS1-201ENST00000313863 KRTAP10-7P60409 375 aaPredicted RBP5.28□□□□□ -1.56
MKS1-201ENST00000313863 LCE2DQ5TA82 110 aaPredicted RBP5.27□□□□□ -1.57
MKS1-201ENST00000313863 LCE3CQ5T5A8 94 aa5.14□□□□□ -1.59
MKS1-201ENST00000313863 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
MKS1-201ENST00000313863 LCE2BO14633 110 aa5.04□□□□□ -1.6
MKS1-201ENST00000313863 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
MKS1-201ENST00000313863 LCE2AQ5TA79 106 aaPredicted RBP4.95□□□□□ -1.62
MKS1-201ENST00000313863 KRTAP9-2Q9BYQ4 174 aa4.93□□□□□ -1.62
MKS1-201ENST00000313863 KRTAP4-8A0A0G2JLE6 195 aa4.87□□□□□ -1.63
MKS1-201ENST00000313863 KRTAP4-8Q9BYQ9 185 aa4.87□□□□□ -1.63
MKS1-201ENST00000313863 KRTAP9-6A8MVA2 160 aa4.85□□□□□ -1.63
MKS1-201ENST00000313863 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
MKS1-201ENST00000313863 KRTAP2-3P0C7H8 128 aa4.84□□□□□ -1.63
MKS1-201ENST00000313863 KRTAP2-4Q9BYR9 128 aa4.84□□□□□ -1.63
MKS1-201ENST00000313863 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.63
MKS1-201ENST00000313863 KRTAP9-6A0A140TA67 174 aa4.82□□□□□ -1.64
MKS1-201ENST00000313863 KMT2DO14686 5537 aa4.76□□□□□ -1.65
MKS1-201ENST00000313863 USH2AO75445 5202 aa4.76□□□□□ -1.65
MKS1-201ENST00000313863 MT1LQ93083 61 aa4.75□□□□□ -1.65
MKS1-201ENST00000313863 MT1EP04732 61 aa4.73□□□□□ -1.65
MKS1-201ENST00000313863 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 253.6 ms