RNA–Protein interactions for RNA: ENST00000313050.11

SEC16A-203, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SEC16A, Length 8,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-203ENST00000313050 DNAH3Q8TD57 4116 aa4.31□□□□□ -1.72
SEC16A-203ENST00000313050 KRTAP8-1Q8IUC2 63 aa4.17□□□□□ -1.74
SEC16A-203ENST00000313050 KRTAP19-4Q3LI73 84 aa4.16□□□□□ -1.74
SEC16A-203ENST00000313050 KMT2AQ03164 3969 aa4.16□□□□□ -1.74
SEC16A-203ENST00000313050 FRAS1Q86XX4 4008 aa4.16□□□□□ -1.74
SEC16A-203ENST00000313050 HECTD4Q9Y4D8 3996 aa4.14□□□□□ -1.75
SEC16A-203ENST00000313050 KRTAP10-7P60409 375 aaPredicted RBP4.14□□□□□ -1.75
SEC16A-203ENST00000313050 ANK2Q01484 3957 aa4.13□□□□□ -1.75
SEC16A-203ENST00000313050 DNAH2Q9P225 4427 aa4.13□□□□□ -1.75
SEC16A-203ENST00000313050 DNAH7Q8WXX0 4024 aa4.12□□□□□ -1.75
SEC16A-203ENST00000313050 ZNF469Q96JG9 3925 aaPredicted RBP4.11□□□□□ -1.75
SEC16A-203ENST00000313050 MT3P25713 68 aa4.09□□□□□ -1.75
SEC16A-203ENST00000313050 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
SEC16A-203ENST00000313050 LORP23490 312 aaPredicted RBP4.07□□□□□ -1.76
SEC16A-203ENST00000313050 KRTAP10-4P60372 401 aaPredicted RBP4.06□□□□□ -1.76
SEC16A-203ENST00000313050 DNAH6Q9C0G6 4158 aa4.06□□□□□ -1.76
SEC16A-203ENST00000313050 MT1HL1P0DM35 61 aa4.06□□□□□ -1.76
SEC16A-203ENST00000313050 VPS13BQ7Z7G8 4022 aa4.01□□□□□ -1.77
SEC16A-203ENST00000313050 ANK3Q12955 4377 aaKnown RBP4□□□□□ -1.77
SEC16A-203ENST00000313050 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
SEC16A-203ENST00000313050 FLGP20930 4061 aaPredicted RBP3.97□□□□□ -1.77
SEC16A-203ENST00000313050 KRTAP19-5Q3LI72 72 aa3.92□□□□□ -1.78
SEC16A-203ENST00000313050 HUWE1Q7Z6Z7 4374 aaKnown RBP3.88□□□□□ -1.79
SEC16A-203ENST00000313050 KRTAP4-5Q9BYR2 181 aa3.87□□□□□ -1.79
SEC16A-203ENST00000313050 LCE3BQ5TA77 95 aa3.84□□□□□ -1.79
SEC16A-203ENST00000313050 SPRR2GQ9BYE4 73 aa3.84□□□□□ -1.79
SEC16A-203ENST00000313050 DNAH1Q9P2D7 4330 aa3.81□□□□□ -1.8
SEC16A-203ENST00000313050 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
SEC16A-203ENST00000313050 SPRR2FQ96RM1 72 aa3.77□□□□□ -1.81
SEC16A-203ENST00000313050 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
SEC16A-203ENST00000313050 MT1HP80294 61 aa3.67□□□□□ -1.82
SEC16A-203ENST00000313050 PRKDCP78527 4128 aaKnown RBP3.67□□□□□ -1.82
SEC16A-203ENST00000313050 DNAH8Q96JB1 4490 aa3.66□□□□□ -1.82
SEC16A-203ENST00000313050 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
SEC16A-203ENST00000313050 DNAH10Q8IVF4 4471 aa3.62□□□□□ -1.83
SEC16A-203ENST00000313050 DNAH9Q9NYC9 4486 aa3.61□□□□□ -1.83
SEC16A-203ENST00000313050 MT2AP02795 61 aa3.59□□□□□ -1.83
SEC16A-203ENST00000313050 KRTAP4-1Q9BYQ7 146 aa3.57□□□□□ -1.84
SEC16A-203ENST00000313050 VPS13DQ5THJ4 4388 aa3.55□□□□□ -1.84
SEC16A-203ENST00000313050 SPRR2EP22531 72 aa3.55□□□□□ -1.84
SEC16A-203ENST00000313050 SPRR2BP35325 72 aa3.55□□□□□ -1.84
SEC16A-203ENST00000313050 SPRR2AP35326 72 aa3.55□□□□□ -1.84
SEC16A-203ENST00000313050 DNAH17Q9UFH2 4485 aa3.54□□□□□ -1.84
SEC16A-203ENST00000313050 MT1GP13640 62 aa3.54□□□□□ -1.84
SEC16A-203ENST00000313050 PRM1P04553 51 aa3.53□□□□□ -1.84
SEC16A-203ENST00000313050 DYNC2H1Q8NCM8 4307 aaKnown RBP3.53□□□□□ -1.84
SEC16A-203ENST00000313050 MT1FP04733 61 aa3.51□□□□□ -1.85
SEC16A-203ENST00000313050 FAT2Q9NYQ8 4349 aa3.48□□□□□ -1.85
SEC16A-203ENST00000313050 DNAH11Q96DT5 4516 aa3.45□□□□□ -1.86
SEC16A-203ENST00000313050 DNAH5Q8TE73 4624 aa3.45□□□□□ -1.86
SEC16A-203ENST00000313050 PLECQ15149 4684 aaKnown RBP3.44□□□□□ -1.86
SEC16A-203ENST00000313050 SPRR2DP22532 72 aa3.44□□□□□ -1.86
SEC16A-203ENST00000313050 LCE2BO14633 110 aa3.43□□□□□ -1.86
SEC16A-203ENST00000313050 PKHD1L1Q86WI1 4243 aa3.41□□□□□ -1.86
SEC16A-203ENST00000313050 STARD9Q9P2P6 4700 aa3.41□□□□□ -1.86
SEC16A-203ENST00000313050 MT1XP80297 61 aa3.36□□□□□ -1.87
SEC16A-203ENST00000313050 DYNC1H1Q14204 4646 aaKnown RBP3.34□□□□□ -1.87
SEC16A-203ENST00000313050 KRTAP19-8Q3LI54 63 aa3.33□□□□□ -1.88
SEC16A-203ENST00000313050 MT1LQ93083 61 aa3.3□□□□□ -1.88
SEC16A-203ENST00000313050 PKHD1P08F94 4074 aa3.28□□□□□ -1.88
SEC16A-203ENST00000313050 KRTAP19-1Q8IUB9 90 aa3.28□□□□□ -1.89
SEC16A-203ENST00000313050 LRP1BQ9NZR2 4599 aa3.26□□□□□ -1.89
SEC16A-203ENST00000313050 LCE2CQ5TA81 110 aa3.22□□□□□ -1.89
SEC16A-203ENST00000313050 KRTAP4-8A0A0G2JLE6 195 aa3.18□□□□□ -1.9
SEC16A-203ENST00000313050 KRTAP4-8Q9BYQ9 185 aa3.18□□□□□ -1.9
SEC16A-203ENST00000313050 LRP1Q07954 4544 aaKnown RBP3.18□□□□□ -1.9
SEC16A-203ENST00000313050 PKD1P98161 4303 aa3.18□□□□□ -1.9
SEC16A-203ENST00000313050 SACSQ9NZJ4 4579 aa3.16□□□□□ -1.9
SEC16A-203ENST00000313050 KRTAP19-3Q7Z4W3 81 aa3.15□□□□□ -1.9
SEC16A-203ENST00000313050 LCE2DQ5TA82 110 aaPredicted RBP3.15□□□□□ -1.91
SEC16A-203ENST00000313050 HSPG2P98160 4391 aa3.14□□□□□ -1.91
SEC16A-203ENST00000313050 RYR1P21817 5038 aa3.14□□□□□ -1.91
SEC16A-203ENST00000313050 FAT1Q14517 4588 aa3.13□□□□□ -1.91
SEC16A-203ENST00000313050 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
SEC16A-203ENST00000313050 MT1EP04732 61 aa3.1□□□□□ -1.91
SEC16A-203ENST00000313050 MT1BP07438 61 aa3.1□□□□□ -1.91
SEC16A-203ENST00000313050 TNXBP22105 4242 aa3.09□□□□□ -1.91
SEC16A-203ENST00000313050 LCE1DQ5T752 114 aa3.09□□□□□ -1.91
SEC16A-203ENST00000313050 DNHD1Q96M86 4753 aa3.09□□□□□ -1.91
SEC16A-203ENST00000313050 APOBP04114 4563 aaKnown RBP3.09□□□□□ -1.92
SEC16A-203ENST00000313050 MT4P47944 62 aa3.08□□□□□ -1.92
SEC16A-203ENST00000313050 KRTAP4-7Q9BYR0 210 aa3.06□□□□□ -1.92
SEC16A-203ENST00000313050 KRTAP9-8Q9BYQ0 159 aa3.04□□□□□ -1.92
SEC16A-203ENST00000313050 KRTAP2-3P0C7H8 128 aa3.01□□□□□ -1.93
SEC16A-203ENST00000313050 KRTAP2-4Q9BYR9 128 aa3.01□□□□□ -1.93
SEC16A-203ENST00000313050 KRTAP2-1Q9BYU5 128 aa3.01□□□□□ -1.93
SEC16A-203ENST00000313050 RYR3Q15413 4870 aa3□□□□□ -1.93
SEC16A-203ENST00000313050 FAT3Q8TDW7 4589 aa2.98□□□□□ -1.93
SEC16A-203ENST00000313050 LOC100996750A0A140TA64 210 aa2.98□□□□□ -1.93
SEC16A-203ENST00000313050 MT1AP04731 61 aa2.98□□□□□ -1.93
SEC16A-203ENST00000313050 MYCBP2O75592 4640 aa2.97□□□□□ -1.93
SEC16A-203ENST00000313050 KRTAP9-3Q9BYQ3 159 aa2.97□□□□□ -1.93
SEC16A-203ENST00000313050 RYR2Q92736 4967 aa2.97□□□□□ -1.93
SEC16A-203ENST00000313050 MT1MQ8N339 61 aa2.97□□□□□ -1.93
SEC16A-203ENST00000313050 KRTAP6-2Q3LI66 62 aa2.95□□□□□ -1.94
SEC16A-203ENST00000313050 KRTAP4-9Q9BYQ8 210 aa2.89□□□□□ -1.95
SEC16A-203ENST00000313050 LCE5AQ5TCM9 118 aa2.87□□□□□ -1.95
SEC16A-203ENST00000313050 KRTAP19-2Q3LHN2 52 aa2.85□□□□□ -1.95
SEC16A-203ENST00000313050 KRTAP9-2Q9BYQ4 174 aa2.84□□□□□ -1.95
SEC16A-203ENST00000313050 PCLOQ9Y6V0 5065 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms