RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 Q5VSD8 79 aa13.21□□□□□ -0.29
HOXB3-201ENST00000311626 KRTAP10-8P60410 259 aa13.19□□□□□ -0.3
HOXB3-201ENST00000311626 CSAG1Q6PB30 78 aa13.17□□□□□ -0.3
HOXB3-201ENST00000311626 KRTAP17-1Q9BYP8 105 aa13.17□□□□□ -0.3
HOXB3-201ENST00000311626 RYR3Q15413 4870 aa13.09□□□□□ -0.31
HOXB3-201ENST00000311626 XP32Q5T750 250 aa13.06□□□□□ -0.32
HOXB3-201ENST00000311626 RPL37P61927 97 aaKnown RBP13.05□□□□□ -0.32
HOXB3-201ENST00000311626 KRTAP3-3Q9BYR6 98 aa13.02□□□□□ -0.32
HOXB3-201ENST00000311626 RYR1P21817 5038 aa13.01□□□□□ -0.33
HOXB3-201ENST00000311626 LINC01554Q52M75 96 aa13□□□□□ -0.33
HOXB3-201ENST00000311626 KIAA1109Q2LD37 5005 aa12.97□□□□□ -0.33
HOXB3-201ENST00000311626 KRTAP10-6P60371 365 aaPredicted RBP12.91□□□□□ -0.34
HOXB3-201ENST00000311626 LPAP08519 4548 aa12.9□□□□□ -0.34
HOXB3-201ENST00000311626 CRIPTQ9P021 101 aa12.88□□□□□ -0.35
HOXB3-201ENST00000311626 KRTAP13-4Q3LI77 160 aa12.87□□□□□ -0.35
HOXB3-201ENST00000311626 S4R3F8 94 aa12.86□□□□□ -0.35
HOXB3-201ENST00000311626 A0A0D9SG42 100 aa12.85□□□□□ -0.35
HOXB3-201ENST00000311626 MT1HL1P0DM35 61 aa12.84□□□□□ -0.35
HOXB3-201ENST00000311626 KRTAP3-2Q9BYR7 98 aa12.82□□□□□ -0.36
HOXB3-201ENST00000311626 LRP2P98164 4655 aa12.76□□□□□ -0.37
HOXB3-201ENST00000311626 P0C880 135 aa12.75□□□□□ -0.37
HOXB3-201ENST00000311626 K7ERS5 55 aa12.74□□□□□ -0.37
HOXB3-201ENST00000311626 KRTAP25-1Q3LHN0 102 aa12.71□□□□□ -0.38
HOXB3-201ENST00000311626 EPPK1P58107 5090 aaKnown RBP12.64□□□□□ -0.39
HOXB3-201ENST00000311626 ABCA13Q86UQ4 5058 aa12.56□□□□□ -0.4
HOXB3-201ENST00000311626 ROMO1P60602 79 aa12.52□□□□□ -0.4
HOXB3-201ENST00000311626 KRTAP4-5Q9BYR2 181 aa12.47□□□□□ -0.41
HOXB3-201ENST00000311626 KRTAP12-2P59991 146 aa12.42□□□□□ -0.42
HOXB3-201ENST00000311626 TPRXLQ17RH7 258 aa12.42□□□□□ -0.42
HOXB3-201ENST00000311626 SPINT4Q6UDR6 99 aa12.37□□□□□ -0.43
HOXB3-201ENST00000311626 C10orf95Q9H7T3 257 aa12.33□□□□□ -0.44
HOXB3-201ENST00000311626 KRTAP12-1P59990 96 aa12.27□□□□□ -0.45
HOXB3-201ENST00000311626 J3QL48 77 aa12.25□□□□□ -0.45
HOXB3-201ENST00000311626 MUC17Q685J3 4493 aa12.09□□□□□ -0.47
HOXB3-201ENST00000311626 M0QZ58 72 aa12.08□□□□□ -0.47
HOXB3-201ENST00000311626 KRTAP4-1Q9BYQ7 146 aa12.08□□□□□ -0.48
HOXB3-201ENST00000311626 LORP23490 312 aaPredicted RBP12□□□□□ -0.49
HOXB3-201ENST00000311626 SEC61BP60468 96 aaKnown RBP11.97□□□□□ -0.49
HOXB3-201ENST00000311626 R4GN34 69 aa11.96□□□□□ -0.5
HOXB3-201ENST00000311626 HERC2O95714 4834 aa11.9□□□□□ -0.5
HOXB3-201ENST00000311626 MUC2Q02817 5179 aa11.84□□□□□ -0.51
HOXB3-201ENST00000311626 KRTAP19-2Q3LHN2 52 aa11.72□□□□□ -0.53
HOXB3-201ENST00000311626 KRTAP15-1Q3LI76 137 aa11.59□□□□□ -0.55
HOXB3-201ENST00000311626 LUZP6Q538Z0 58 aa11.53□□□□□ -0.56
HOXB3-201ENST00000311626 HERC1Q15751 4861 aa11.45□□□□□ -0.58
HOXB3-201ENST00000311626 BIRC6Q9NR09 4857 aa11.43□□□□□ -0.58
HOXB3-201ENST00000311626 FLGP20930 4061 aaPredicted RBP11.42□□□□□ -0.58
HOXB3-201ENST00000311626 NDUFAF8A1L188 74 aa11.41□□□□□ -0.58
HOXB3-201ENST00000311626 CAMK2N1Q7Z7J9 78 aa11.38□□□□□ -0.59
HOXB3-201ENST00000311626 PCLOQ9Y6V0 5065 aa11.34□□□□□ -0.59
HOXB3-201ENST00000311626 FAT4Q6V0I7 4981 aa11.24□□□□□ -0.61
HOXB3-201ENST00000311626 HMCN2Q8NDA2 5059 aa11.2□□□□□ -0.62
HOXB3-201ENST00000311626 PLAC4Q8WY50 150 aa11.13□□□□□ -0.63
HOXB3-201ENST00000311626 LCE2CQ5TA81 110 aa11.05□□□□□ -0.64
HOXB3-201ENST00000311626 RNF213Q63HN8 5207 aa10.97□□□□□ -0.65
HOXB3-201ENST00000311626 PP632Q6XCG6 107 aa10.91□□□□□ -0.66
HOXB3-201ENST00000311626 M0R2T5 61 aa10.89□□□□□ -0.67
HOXB3-201ENST00000311626 TNP1P09430 55 aa10.86□□□□□ -0.67
HOXB3-201ENST00000311626 UBR4Q5T4S7 5183 aa10.84□□□□□ -0.67
HOXB3-201ENST00000311626 KRTAP19-1Q8IUB9 90 aa10.79□□□□□ -0.68
HOXB3-201ENST00000311626 MT1HP80294 61 aa10.74□□□□□ -0.69
HOXB3-201ENST00000311626 SPRR2GQ9BYE4 73 aa10.72□□□□□ -0.69
HOXB3-201ENST00000311626 MT1FP04733 61 aa10.63□□□□□ -0.71
HOXB3-201ENST00000311626 KRTAP10-10P60014 251 aa10.63□□□□□ -0.71
HOXB3-201ENST00000311626 MT2AP02795 61 aa10.59□□□□□ -0.71
HOXB3-201ENST00000311626 KRTAP9-8Q9BYQ0 159 aa10.5□□□□□ -0.73
HOXB3-201ENST00000311626 KRTAP23-1A1A580 65 aa10.46□□□□□ -0.73
HOXB3-201ENST00000311626 LCE3AQ5TA76 89 aa10.42□□□□□ -0.74
HOXB3-201ENST00000311626 SPRR5A0A1B0GTR4 108 aa10.23□□□□□ -0.77
HOXB3-201ENST00000311626 MT1BP07438 61 aa10.23□□□□□ -0.77
HOXB3-201ENST00000311626 KRTAP19-8Q3LI54 63 aa10.22□□□□□ -0.77
HOXB3-201ENST00000311626 KRTAP10-5P60370 271 aa10.18□□□□□ -0.78
HOXB3-201ENST00000311626 MT1XP80297 61 aa10.16□□□□□ -0.78
HOXB3-201ENST00000311626 KRTAP9-3Q9BYQ3 159 aa10.03□□□□□ -0.8
HOXB3-201ENST00000311626 KRTAP8-1Q8IUC2 63 aa9.98□□□□□ -0.81
HOXB3-201ENST00000311626 KRTAP10-7P60409 375 aaPredicted RBP9.97□□□□□ -0.81
HOXB3-201ENST00000311626 KRTAP10-12P60413 245 aa9.93□□□□□ -0.82
HOXB3-201ENST00000311626 KRTAP12-3P60328 96 aa9.85□□□□□ -0.83
HOXB3-201ENST00000311626 USH2AO75445 5202 aa9.81□□□□□ -0.84
HOXB3-201ENST00000311626 PRO2289Q9P1D8 64 aa9.74□□□□□ -0.85
HOXB3-201ENST00000311626 LCE2BO14633 110 aa9.72□□□□□ -0.85
HOXB3-201ENST00000311626 KMT2DO14686 5537 aa9.68□□□□□ -0.86
HOXB3-201ENST00000311626 KRTAP19-5Q3LI72 72 aa9.52□□□□□ -0.89
HOXB3-201ENST00000311626 KRTAP4-8A0A0G2JLE6 195 aa9.44□□□□□ -0.9
HOXB3-201ENST00000311626 KRTAP4-8Q9BYQ9 185 aa9.44□□□□□ -0.9
HOXB3-201ENST00000311626 LCE2AQ5TA79 106 aaPredicted RBP9.39□□□□□ -0.91
HOXB3-201ENST00000311626 LCE3CQ5T5A8 94 aa9.25□□□□□ -0.93
HOXB3-201ENST00000311626 KRTAP4-7Q9BYR0 210 aa9.09□□□□□ -0.95
HOXB3-201ENST00000311626 INE1O15225 51 aa9.08□□□□□ -0.96
HOXB3-201ENST00000311626 KRTAP9-6A8MVA2 160 aa9.05□□□□□ -0.96
HOXB3-201ENST00000311626 KRTAP19-7Q3SYF9 63 aa9.05□□□□□ -0.96
HOXB3-201ENST00000311626 FSIP2Q5CZC0 6907 aa8.94□□□□□ -0.98
HOXB3-201ENST00000311626 SSPOA2VEC9 5147 aa8.92□□□□□ -0.98
HOXB3-201ENST00000311626 MT1LQ93083 61 aa8.77□□□□□ -1.01
HOXB3-201ENST00000311626 MT1EP04732 61 aa8.77□□□□□ -1.01
HOXB3-201ENST00000311626 KRTAP2-3P0C7H8 128 aa8.54□□□□□ -1.04
HOXB3-201ENST00000311626 KRTAP19-6Q3LI70 58 aa8.54□□□□□ -1.04
HOXB3-201ENST00000311626 KRTAP2-4Q9BYR9 128 aa8.54□□□□□ -1.04
HOXB3-201ENST00000311626 KRTAP2-1Q9BYU5 128 aa8.54□□□□□ -1.04
HOXB3-201ENST00000311626 FCGBPQ9Y6R7 5405 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms