RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 CRIPTQ9P021 101 aa10.34□□□□□ -0.75
HERPUD2-201ENST00000311350 ROMO1P60602 79 aa10.32□□□□□ -0.76
HERPUD2-201ENST00000311350 MYCBP2O75592 4640 aa10.31□□□□□ -0.76
HERPUD2-201ENST00000311350 KRTAP10-4P60372 401 aaPredicted RBP10.27□□□□□ -0.77
HERPUD2-201ENST00000311350 A0A1B0GU33 70 aa10.25□□□□□ -0.77
HERPUD2-201ENST00000311350 HERC1Q15751 4861 aa10.22□□□□□ -0.77
HERPUD2-201ENST00000311350 DMBT1Q9UGM3 2413 aaPredicted RBP10.21□□□□□ -0.77
HERPUD2-201ENST00000311350 H1FX-AS1Q4G0G2 97 aa10.18□□□□□ -0.78
HERPUD2-201ENST00000311350 KRTAP3-1Q9BYR8 98 aa10.17□□□□□ -0.78
HERPUD2-201ENST00000311350 J3QL48 77 aa10.16□□□□□ -0.78
HERPUD2-201ENST00000311350 C20orf166-AS1Q96NR2 134 aa10.16□□□□□ -0.78
HERPUD2-201ENST00000311350 P0C880 135 aa10.13□□□□□ -0.79
HERPUD2-201ENST00000311350 LRP1Q07954 4544 aaKnown RBP10.12□□□□□ -0.79
HERPUD2-201ENST00000311350 PKHD1L1Q86WI1 4243 aa10.07□□□□□ -0.8
HERPUD2-201ENST00000311350 FAT3Q8TDW7 4589 aa10.07□□□□□ -0.8
HERPUD2-201ENST00000311350 C9orf92A6NGG3 77 aa10.03□□□□□ -0.8
HERPUD2-201ENST00000311350 COX6B2Q6YFQ2 88 aa10.01□□□□□ -0.81
HERPUD2-201ENST00000311350 K7ERS5 55 aa9.95□□□□□ -0.82
HERPUD2-201ENST00000311350 MT1HL1P0DM35 61 aa9.94□□□□□ -0.82
HERPUD2-201ENST00000311350 TPRXLQ17RH7 258 aa9.88□□□□□ -0.83
HERPUD2-201ENST00000311350 HMCN2Q8NDA2 5059 aa9.84□□□□□ -0.83
HERPUD2-201ENST00000311350 TNXBP22105 4242 aa9.83□□□□□ -0.84
HERPUD2-201ENST00000311350 A0A0D9SG42 100 aa9.83□□□□□ -0.84
HERPUD2-201ENST00000311350 SPINT4Q6UDR6 99 aa9.83□□□□□ -0.84
HERPUD2-201ENST00000311350 KRTAP13-4Q3LI77 160 aa9.83□□□□□ -0.84
HERPUD2-201ENST00000311350 C10orf95Q9H7T3 257 aa9.82□□□□□ -0.84
HERPUD2-201ENST00000311350 KRTAP10-8P60410 259 aa9.8□□□□□ -0.84
HERPUD2-201ENST00000311350 RPL37P61927 97 aaKnown RBP9.78□□□□□ -0.84
HERPUD2-201ENST00000311350 KRTAP10-6P60371 365 aaPredicted RBP9.76□□□□□ -0.85
HERPUD2-201ENST00000311350 NDUFAF8A1L188 74 aa9.68□□□□□ -0.86
HERPUD2-201ENST00000311350 KRTAP3-3Q9BYR6 98 aa9.67□□□□□ -0.86
HERPUD2-201ENST00000311350 KRTAP3-2Q9BYR7 98 aa9.65□□□□□ -0.86
HERPUD2-201ENST00000311350 KRTAP15-1Q3LI76 137 aa9.64□□□□□ -0.87
HERPUD2-201ENST00000311350 UBR4Q5T4S7 5183 aa9.6□□□□□ -0.87
HERPUD2-201ENST00000311350 LRP2P98164 4655 aa9.58□□□□□ -0.88
HERPUD2-201ENST00000311350 KRTAP12-2P59991 146 aa9.53□□□□□ -0.88
HERPUD2-201ENST00000311350 S4R3F8 94 aa9.52□□□□□ -0.89
HERPUD2-201ENST00000311350 XP32Q5T750 250 aa9.47□□□□□ -0.89
HERPUD2-201ENST00000311350 LPAP08519 4548 aa9.41□□□□□ -0.9
HERPUD2-201ENST00000311350 KRTAP12-1P59990 96 aa9.37□□□□□ -0.91
HERPUD2-201ENST00000311350 RNF213Q63HN8 5207 aa9.33□□□□□ -0.92
HERPUD2-201ENST00000311350 M0QZ58 72 aa9.14□□□□□ -0.95
HERPUD2-201ENST00000311350 MUC2Q02817 5179 aa9.1□□□□□ -0.95
HERPUD2-201ENST00000311350 MUC17Q685J3 4493 aa8.98□□□□□ -0.97
HERPUD2-201ENST00000311350 A0A0A0MQY5 61 aa8.96□□□□□ -0.97
HERPUD2-201ENST00000311350 PLAC4Q8WY50 150 aa8.94□□□□□ -0.98
HERPUD2-201ENST00000311350 SEC61BP60468 96 aaKnown RBP8.88□□□□□ -0.99
HERPUD2-201ENST00000311350 FAT4Q6V0I7 4981 aa8.85□□□□□ -0.99
HERPUD2-201ENST00000311350 LUZP6Q538Z0 58 aa8.83□□□□□ -1
HERPUD2-201ENST00000311350 R4GN34 69 aa8.79□□□□□ -1
HERPUD2-201ENST00000311350 KRTAP4-1Q9BYQ7 146 aa8.79□□□□□ -1
HERPUD2-201ENST00000311350 LCE2AQ5TA79 106 aaPredicted RBP8.77□□□□□ -1.01
HERPUD2-201ENST00000311350 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
HERPUD2-201ENST00000311350 KRTAP19-2Q3LHN2 52 aa8.55□□□□□ -1.04
HERPUD2-201ENST00000311350 LCE2CQ5TA81 110 aa8.55□□□□□ -1.04
HERPUD2-201ENST00000311350 KRTAP9-2Q9BYQ4 174 aa8.51□□□□□ -1.05
HERPUD2-201ENST00000311350 MT1HP80294 61 aa8.45□□□□□ -1.06
HERPUD2-201ENST00000311350 PP632Q6XCG6 107 aa8.45□□□□□ -1.06
HERPUD2-201ENST00000311350 CAMK2N1Q7Z7J9 78 aa8.43□□□□□ -1.06
HERPUD2-201ENST00000311350 M0R2T5 61 aa8.31□□□□□ -1.08
HERPUD2-201ENST00000311350 LCE2DQ5TA82 110 aaPredicted RBP8.28□□□□□ -1.08
HERPUD2-201ENST00000311350 FLGP20930 4061 aaPredicted RBP8.28□□□□□ -1.08
HERPUD2-201ENST00000311350 KRTAP23-1A1A580 65 aa8.22□□□□□ -1.09
HERPUD2-201ENST00000311350 KRTAP9-6A0A140TA67 174 aa8.19□□□□□ -1.1
HERPUD2-201ENST00000311350 SPRR5A0A1B0GTR4 108 aa8.16□□□□□ -1.1
HERPUD2-201ENST00000311350 TNP1P09430 55 aa8.12□□□□□ -1.11
HERPUD2-201ENST00000311350 FSIP2Q5CZC0 6907 aa8.08□□□□□ -1.12
HERPUD2-201ENST00000311350 CRCT1Q9UGL9 99 aa8.05□□□□□ -1.12
HERPUD2-201ENST00000311350 KRTAP9-8Q9BYQ0 159 aa8.01□□□□□ -1.13
HERPUD2-201ENST00000311350 SPRR2GQ9BYE4 73 aa7.94□□□□□ -1.14
HERPUD2-201ENST00000311350 MT2AP02795 61 aa7.89□□□□□ -1.15
HERPUD2-201ENST00000311350 MT1FP04733 61 aa7.84□□□□□ -1.16
HERPUD2-201ENST00000311350 KRTAP19-1Q8IUB9 90 aa7.81□□□□□ -1.16
HERPUD2-201ENST00000311350 KRTAP10-10P60014 251 aa7.8□□□□□ -1.16
HERPUD2-201ENST00000311350 PRO2289Q9P1D8 64 aa7.76□□□□□ -1.17
HERPUD2-201ENST00000311350 LCE3AQ5TA76 89 aa7.75□□□□□ -1.17
HERPUD2-201ENST00000311350 KRTAP9-3Q9BYQ3 159 aa7.75□□□□□ -1.17
HERPUD2-201ENST00000311350 USH2AO75445 5202 aa7.72□□□□□ -1.17
HERPUD2-201ENST00000311350 LCE2BO14633 110 aa7.7□□□□□ -1.18
HERPUD2-201ENST00000311350 SSPOA2VEC9 5147 aa7.65□□□□□ -1.18
HERPUD2-201ENST00000311350 KRTAP19-8Q3LI54 63 aa7.59□□□□□ -1.19
HERPUD2-201ENST00000311350 INE1O15225 51 aa7.53□□□□□ -1.2
HERPUD2-201ENST00000311350 KRTAP8-1Q8IUC2 63 aa7.52□□□□□ -1.21
HERPUD2-201ENST00000311350 FCGBPQ9Y6R7 5405 aaPredicted RBP7.49□□□□□ -1.21
HERPUD2-201ENST00000311350 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.49□□□□□ -1.21
HERPUD2-201ENST00000311350 KRTAP19-6Q3LI70 58 aa7.42□□□□□ -1.22
HERPUD2-201ENST00000311350 MT1BP07438 61 aa7.4□□□□□ -1.22
HERPUD2-201ENST00000311350 KRTAP10-5P60370 271 aa7.39□□□□□ -1.23
HERPUD2-201ENST00000311350 KRTAP9-7A8MTY7 169 aa7.38□□□□□ -1.23
HERPUD2-201ENST00000311350 MT1XP80297 61 aa7.38□□□□□ -1.23
HERPUD2-201ENST00000311350 KRTAP10-12P60413 245 aa7.29□□□□□ -1.24
HERPUD2-201ENST00000311350 KRTAP12-3P60328 96 aa7.28□□□□□ -1.24
HERPUD2-201ENST00000311350 MACF1Q9UPN3 7388 aaKnown RBP7.26□□□□□ -1.25
HERPUD2-201ENST00000311350 SYNE2Q8WXH0 6885 aaKnown RBP7.14□□□□□ -1.27
HERPUD2-201ENST00000311350 KRTAP10-7P60409 375 aaPredicted RBP7.12□□□□□ -1.27
HERPUD2-201ENST00000311350 KRTAP6-3Q3LI67 103 aa7.02□□□□□ -1.29
HERPUD2-201ENST00000311350 LCE3CQ5T5A8 94 aa6.89□□□□□ -1.31
HERPUD2-201ENST00000311350 KRTAP19-5Q3LI72 72 aa6.88□□□□□ -1.31
HERPUD2-201ENST00000311350 KMT2DO14686 5537 aa6.87□□□□□ -1.31
HERPUD2-201ENST00000311350 KRTAP9-6A8MVA2 160 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms