RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.31□□□□□ -1.08
CCS-201ENST00000310190 KLKP1Q107X0 134 aa8.3□□□□□ -1.08
CCS-201ENST00000310190 FAM236AA0A1B0GUQ0 79 aa8.29□□□□□ -1.08
CCS-201ENST00000310190 FAM236BA0A1B0GV22 79 aa8.29□□□□□ -1.08
CCS-201ENST00000310190 SMIM20Q8N5G0 67 aa8.28□□□□□ -1.08
CCS-201ENST00000310190 SSPOA2VEC9 5147 aa8.24□□□□□ -1.09
CCS-201ENST00000310190 TRAV7A0A075B6U4 112 aa8.23□□□□□ -1.09
CCS-201ENST00000310190 H0YAA0 97 aa8.16□□□□□ -1.1
CCS-201ENST00000310190 NDUFC1O43677 76 aa8.15□□□□□ -1.1
CCS-201ENST00000310190 DMAC1Q96GE9 116 aa8.15□□□□□ -1.1
CCS-201ENST00000310190 KRTAP19-1Q8IUB9 90 aa8.13□□□□□ -1.11
CCS-201ENST00000310190 SPRR2GQ9BYE4 73 aa8.1□□□□□ -1.11
CCS-201ENST00000310190 CRIPTQ9P021 101 aa8.08□□□□□ -1.12
CCS-201ENST00000310190 KRTAP19-6Q3LI70 58 aa8.07□□□□□ -1.12
CCS-201ENST00000310190 FCGBPQ9Y6R7 5405 aaPredicted RBP8.06□□□□□ -1.12
CCS-201ENST00000310190 SERP2Q8N6R1 65 aa8.03□□□□□ -1.12
CCS-201ENST00000310190 KRTAP19-8Q3LI54 63 aa8.02□□□□□ -1.13
CCS-201ENST00000310190 SNURFQ9Y675 71 aa7.99□□□□□ -1.13
CCS-201ENST00000310190 ACYP2P14621 99 aa7.97□□□□□ -1.13
CCS-201ENST00000310190 C20orf197Q8N268 126 aa7.97□□□□□ -1.13
CCS-201ENST00000310190 SYNE2Q8WXH0 6885 aaKnown RBP7.96□□□□□ -1.14
CCS-201ENST00000310190 SPANXA2-OT1Q8N9U9 137 aa7.95□□□□□ -1.14
CCS-201ENST00000310190 MT1BP07438 61 aa7.93□□□□□ -1.14
CCS-201ENST00000310190 MACF1Q9UPN3 7388 aaKnown RBP7.9□□□□□ -1.14
CCS-201ENST00000310190 Q5VV11 94 aa7.9□□□□□ -1.14
CCS-201ENST00000310190 ADM2Q7Z4H4 148 aa7.9□□□□□ -1.14
CCS-201ENST00000310190 COX7CP15954 63 aa7.89□□□□□ -1.15
CCS-201ENST00000310190 ANAPC13Q9BS18 74 aa7.84□□□□□ -1.15
CCS-201ENST00000310190 SPTSSBQ8NFR3 76 aa7.83□□□□□ -1.16
CCS-201ENST00000310190 KRTAP3-2Q9BYR7 98 aa7.82□□□□□ -1.16
CCS-201ENST00000310190 P0C880 135 aa7.77□□□□□ -1.17
CCS-201ENST00000310190 CHKB-CPT1BH3BT56 60 aa7.72□□□□□ -1.17
CCS-201ENST00000310190 KRTAP10-5P60370 271 aa7.72□□□□□ -1.17
CCS-201ENST00000310190 R4GN34 69 aa7.7□□□□□ -1.18
CCS-201ENST00000310190 H7BZZ5 65 aa7.69□□□□□ -1.18
CCS-201ENST00000310190 CYSTM1Q9H1C7 97 aa7.69□□□□□ -1.18
CCS-201ENST00000310190 A6NN06 94 aa7.68□□□□□ -1.18
CCS-201ENST00000310190 CCDC179H3BU77 68 aa7.65□□□□□ -1.18
CCS-201ENST00000310190 M0QZ58 72 aa7.62□□□□□ -1.19
CCS-201ENST00000310190 COA5Q86WW8 74 aa7.61□□□□□ -1.19
CCS-201ENST00000310190 KRTAP6-3Q3LI67 103 aa7.55□□□□□ -1.2
CCS-201ENST00000310190 PLAC4Q8WY50 150 aa7.55□□□□□ -1.2
CCS-201ENST00000310190 NEBP20929 6669 aa7.51□□□□□ -1.21
CCS-201ENST00000310190 PRO2289Q9P1D8 64 aa7.5□□□□□ -1.21
CCS-201ENST00000310190 MT1XP80297 61 aa7.49□□□□□ -1.21
CCS-201ENST00000310190 ATP5EP56381 51 aaPredicted RBP7.45□□□□□ -1.22
CCS-201ENST00000310190 MUC12Q9UKN1 5478 aa7.41□□□□□ -1.22
CCS-201ENST00000310190 LINC01554Q52M75 96 aa7.41□□□□□ -1.22
CCS-201ENST00000310190 TMEM258P61165 79 aa7.39□□□□□ -1.23
CCS-201ENST00000310190 SEC61GP60059 68 aa7.37□□□□□ -1.23
CCS-201ENST00000310190 KRTAP13-4Q3LI77 160 aa7.37□□□□□ -1.23
CCS-201ENST00000310190 SERP1Q9Y6X1 66 aa7.36□□□□□ -1.23
CCS-201ENST00000310190 KRTAP12-2P59991 146 aa7.35□□□□□ -1.23
CCS-201ENST00000310190 KRTAP5-9P26371 169 aa7.31□□□□□ -1.24
CCS-201ENST00000310190 KRTAP20-1Q3LI63 56 aa7.28□□□□□ -1.24
CCS-201ENST00000310190 A0A1B0GU33 70 aa7.25□□□□□ -1.25
CCS-201ENST00000310190 A0A1B0GU69 56 aa7.2□□□□□ -1.26
CCS-201ENST00000310190 PCP4P48539 62 aa7.17□□□□□ -1.26
CCS-201ENST00000310190 KRTAP10-12P60413 245 aa7.17□□□□□ -1.26
CCS-201ENST00000310190 KMT2DO14686 5537 aa7.16□□□□□ -1.26
CCS-201ENST00000310190 SPATA8Q6RVD6 105 aa7.14□□□□□ -1.27
CCS-201ENST00000310190 LINC01558Q9Y6Z2 57 aa7.12□□□□□ -1.27
CCS-201ENST00000310190 PRR15LQ9BU68 103 aa7.11□□□□□ -1.27
CCS-201ENST00000310190 MDN1Q9NU22 5596 aa7.11□□□□□ -1.27
CCS-201ENST00000310190 KRTAP10-7P60409 375 aaPredicted RBP7.1□□□□□ -1.27
CCS-201ENST00000310190 SMIM26A0A096LP01 95 aa7.07□□□□□ -1.28
CCS-201ENST00000310190 CAMK2N1Q7Z7J9 78 aa7.07□□□□□ -1.28
CCS-201ENST00000310190 KRTAP12-1P59990 96 aa7.06□□□□□ -1.28
CCS-201ENST00000310190 KRTAP8-1Q8IUC2 63 aa7.06□□□□□ -1.28
CCS-201ENST00000310190 A0A0D9SG42 100 aa7.05□□□□□ -1.28
CCS-201ENST00000310190 KRTAP4-8A0A0G2JLE6 195 aa7.01□□□□□ -1.29
CCS-201ENST00000310190 KRTAP4-8Q9BYQ9 185 aa7.01□□□□□ -1.29
CCS-201ENST00000310190 SPRR2FQ96RM1 72 aa6.98□□□□□ -1.29
CCS-201ENST00000310190 SPINT4Q6UDR6 99 aa6.96□□□□□ -1.3
CCS-201ENST00000310190 V9GYY9 64 aa6.92□□□□□ -1.3
CCS-201ENST00000310190 A8MU10 97 aa6.91□□□□□ -1.3
CCS-201ENST00000310190 KRTAP2-3P0C7H8 128 aa6.9□□□□□ -1.3
CCS-201ENST00000310190 KRTAP2-4Q9BYR9 128 aa6.9□□□□□ -1.3
CCS-201ENST00000310190 UQCR11O14957 56 aa6.87□□□□□ -1.31
CCS-201ENST00000310190 Q1T7F1 81 aa6.86□□□□□ -1.31
CCS-201ENST00000310190 LCE1AQ5T7P2 110 aa6.85□□□□□ -1.31
CCS-201ENST00000310190 PSPHP1O15172 72 aa6.83□□□□□ -1.32
CCS-201ENST00000310190 SPRR2EP22531 72 aa6.82□□□□□ -1.32
CCS-201ENST00000310190 SPRR2BP35325 72 aa6.82□□□□□ -1.32
CCS-201ENST00000310190 SPRR2AP35326 72 aa6.82□□□□□ -1.32
CCS-201ENST00000310190 RPS28P62857 69 aaKnown RBP6.82□□□□□ -1.32
CCS-201ENST00000310190 MIR22HGQ0VDD5 57 aa6.74□□□□□ -1.33
CCS-201ENST00000310190 C10orf95Q9H7T3 257 aa6.72□□□□□ -1.33
CCS-201ENST00000310190 KRTAP19-7Q3SYF9 63 aa6.71□□□□□ -1.34
CCS-201ENST00000310190 TNP1P09430 55 aa6.65□□□□□ -1.34
CCS-201ENST00000310190 KRTAP2-2Q9BYT5 123 aa6.65□□□□□ -1.34
CCS-201ENST00000310190 KRTAP2-1Q9BYU5 128 aa6.65□□□□□ -1.34
CCS-201ENST00000310190 A6NED7 52 aa6.64□□□□□ -1.35
CCS-201ENST00000310190 MT1EP04732 61 aa6.62□□□□□ -1.35
CCS-201ENST00000310190 SPRR2DP22532 72 aa6.6□□□□□ -1.35
CCS-201ENST00000310190 K7ERS5 55 aa6.57□□□□□ -1.36
CCS-201ENST00000310190 LCE5AQ5TCM9 118 aa6.55□□□□□ -1.36
CCS-201ENST00000310190 KRTAP19-5Q3LI72 72 aa6.54□□□□□ -1.36
CCS-201ENST00000310190 KRTAP19-3Q7Z4W3 81 aa6.53□□□□□ -1.36
CCS-201ENST00000310190 GPR98Q8WXG9 6306 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms