RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 VWFP04275 2813 aa3.38□□□□□ -1.87
SEC22A-201ENST00000309934 C9orf92A6NGG3 77 aa3.38□□□□□ -1.87
SEC22A-201ENST00000309934 RPL37P61927 97 aaKnown RBP3.35□□□□□ -1.87
SEC22A-201ENST00000309934 KRTAP10-8P60410 259 aa3.34□□□□□ -1.88
SEC22A-201ENST00000309934 COX6B2Q6YFQ2 88 aa3.33□□□□□ -1.88
SEC22A-201ENST00000309934 LRP1BQ9NZR2 4599 aa3.33□□□□□ -1.88
SEC22A-201ENST00000309934 TPRXLQ17RH7 258 aa3.31□□□□□ -1.88
SEC22A-201ENST00000309934 H1FX-AS1Q4G0G2 97 aa3.3□□□□□ -1.88
SEC22A-201ENST00000309934 DYNC1H1Q14204 4646 aaKnown RBP3.29□□□□□ -1.88
SEC22A-201ENST00000309934 MUC17Q685J3 4493 aa3.29□□□□□ -1.88
SEC22A-201ENST00000309934 SRRM2Q9UQ35 2752 aaKnown RBP3.28□□□□□ -1.88
SEC22A-201ENST00000309934 C10orf95Q9H7T3 257 aa3.28□□□□□ -1.88
SEC22A-201ENST00000309934 RYR2Q92736 4967 aa3.27□□□□□ -1.89
SEC22A-201ENST00000309934 KRTAP10-4P60372 401 aaPredicted RBP3.25□□□□□ -1.89
SEC22A-201ENST00000309934 M0R2T5 61 aa3.25□□□□□ -1.89
SEC22A-201ENST00000309934 PLAC4Q8WY50 150 aa3.25□□□□□ -1.89
SEC22A-201ENST00000309934 S4R3F8 94 aa3.25□□□□□ -1.89
SEC22A-201ENST00000309934 KRTAP13-3Q3SY46 172 aa3.24□□□□□ -1.89
SEC22A-201ENST00000309934 XP32Q5T750 250 aa3.24□□□□□ -1.89
SEC22A-201ENST00000309934 LRP1Q07954 4544 aaKnown RBP3.23□□□□□ -1.89
SEC22A-201ENST00000309934 KRTAP23-1A1A580 65 aa3.21□□□□□ -1.89
SEC22A-201ENST00000309934 H0YAA0 97 aa3.2□□□□□ -1.9
SEC22A-201ENST00000309934 R4GN34 69 aa3.2□□□□□ -1.9
SEC22A-201ENST00000309934 DNHD1Q96M86 4753 aa3.2□□□□□ -1.9
SEC22A-201ENST00000309934 KRTAP3-3Q9BYR6 98 aa3.18□□□□□ -1.9
SEC22A-201ENST00000309934 KRTAP3-2Q9BYR7 98 aa3.18□□□□□ -1.9
SEC22A-201ENST00000309934 MEGF8Q7Z7M0 2845 aa3.18□□□□□ -1.9
SEC22A-201ENST00000309934 KRTAP15-1Q3LI76 137 aa3.17□□□□□ -1.9
SEC22A-201ENST00000309934 HERC1Q15751 4861 aa3.15□□□□□ -1.9
SEC22A-201ENST00000309934 RYR3Q15413 4870 aa3.15□□□□□ -1.91
SEC22A-201ENST00000309934 RYR1P21817 5038 aa3.15□□□□□ -1.91
SEC22A-201ENST00000309934 MT1HL1P0DM35 61 aa3.14□□□□□ -1.91
SEC22A-201ENST00000309934 M0QZ58 72 aa3.11□□□□□ -1.91
SEC22A-201ENST00000309934 LPAP08519 4548 aa3.09□□□□□ -1.92
SEC22A-201ENST00000309934 BIRC6Q9NR09 4857 aa3.07□□□□□ -1.92
SEC22A-201ENST00000309934 PRO2289Q9P1D8 64 aa3.07□□□□□ -1.92
SEC22A-201ENST00000309934 KMT2CQ8NEZ4 4911 aaKnown RBP3.05□□□□□ -1.92
SEC22A-201ENST00000309934 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
SEC22A-201ENST00000309934 KRTAP17-1Q9BYP8 105 aa2.99□□□□□ -1.93
SEC22A-201ENST00000309934 LRP2P98164 4655 aa2.97□□□□□ -1.93
SEC22A-201ENST00000309934 HERC2O95714 4834 aa2.96□□□□□ -1.94
SEC22A-201ENST00000309934 KRTAP3-1Q9BYR8 98 aa2.95□□□□□ -1.94
SEC22A-201ENST00000309934 INE1O15225 51 aa2.94□□□□□ -1.94
SEC22A-201ENST00000309934 KRTAP4-5Q9BYR2 181 aa2.94□□□□□ -1.94
SEC22A-201ENST00000309934 LCE2DQ5TA82 110 aaPredicted RBP2.89□□□□□ -1.95
SEC22A-201ENST00000309934 ABCA13Q86UQ4 5058 aa2.86□□□□□ -1.95
SEC22A-201ENST00000309934 KRTAP12-2P59991 146 aa2.85□□□□□ -1.95
SEC22A-201ENST00000309934 KRTAP10-6P60371 365 aaPredicted RBP2.82□□□□□ -1.96
SEC22A-201ENST00000309934 LCE2CQ5TA81 110 aa2.82□□□□□ -1.96
SEC22A-201ENST00000309934 TNP1P09430 55 aa2.8□□□□□ -1.96
SEC22A-201ENST00000309934 KRTAP10-10P60014 251 aa2.8□□□□□ -1.96
SEC22A-201ENST00000309934 KRTAP12-1P59990 96 aa2.78□□□□□ -1.96
SEC22A-201ENST00000309934 KRTAP13-4Q3LI77 160 aa2.76□□□□□ -1.97
SEC22A-201ENST00000309934 EPPK1P58107 5090 aaKnown RBP2.76□□□□□ -1.97
SEC22A-201ENST00000309934 PCLOQ9Y6V0 5065 aa2.75□□□□□ -1.97
SEC22A-201ENST00000309934 LCE2AQ5TA79 106 aaPredicted RBP2.74□□□□□ -1.97
SEC22A-201ENST00000309934 LCE2BO14633 110 aa2.72□□□□□ -1.97
SEC22A-201ENST00000309934 KRTAP9-6A0A140TA67 174 aa2.71□□□□□ -1.98
SEC22A-201ENST00000309934 KRTAP4-1Q9BYQ7 146 aa2.71□□□□□ -1.98
SEC22A-201ENST00000309934 KIAA1109Q2LD37 5005 aa2.7□□□□□ -1.98
SEC22A-201ENST00000309934 MT1HP80294 61 aa2.66□□□□□ -1.98
SEC22A-201ENST00000309934 KRTAP9-2Q9BYQ4 174 aa2.66□□□□□ -1.98
SEC22A-201ENST00000309934 SPRR2GQ9BYE4 73 aa2.64□□□□□ -1.99
SEC22A-201ENST00000309934 CRCT1Q9UGL9 99 aa2.64□□□□□ -1.99
SEC22A-201ENST00000309934 KRTAP19-2Q3LHN2 52 aa2.64□□□□□ -1.99
SEC22A-201ENST00000309934 HMCN2Q8NDA2 5059 aa2.63□□□□□ -1.99
SEC22A-201ENST00000309934 FAT4Q6V0I7 4981 aa2.6□□□□□ -1.99
SEC22A-201ENST00000309934 MT2AP02795 61 aa2.59□□□□□ -2
SEC22A-201ENST00000309934 KRTAP19-8Q3LI54 63 aa2.56□□□□□ -2
SEC22A-201ENST00000309934 LORP23490 312 aaPredicted RBP2.56□□□□□ -2
SEC22A-201ENST00000309934 UBR4Q5T4S7 5183 aa2.55□□□□□ -2
SEC22A-201ENST00000309934 LOC100996750A0A140TA64 210 aa2.53□□□□□ -2.01
SEC22A-201ENST00000309934 KRTAP4-6Q9BYQ5 205 aa2.53□□□□□ -2.01
SEC22A-201ENST00000309934 MT1FP04733 61 aa2.52□□□□□ -2.01
SEC22A-201ENST00000309934 KRTAP19-4Q3LI73 84 aa2.52□□□□□ -2.01
SEC22A-201ENST00000309934 KRTAP9-8Q9BYQ0 159 aa2.49□□□□□ -2.01
SEC22A-201ENST00000309934 KRTAP10-12P60413 245 aa2.49□□□□□ -2.01
SEC22A-201ENST00000309934 KRTAP19-1Q8IUB9 90 aa2.47□□□□□ -2.01
SEC22A-201ENST00000309934 KRTAP9-7A8MTY7 169 aa2.46□□□□□ -2.02
SEC22A-201ENST00000309934 KRTAP9-3Q9BYQ3 159 aa2.43□□□□□ -2.02
SEC22A-201ENST00000309934 KRTAP10-5P60370 271 aa2.39□□□□□ -2.03
SEC22A-201ENST00000309934 MT1BP07438 61 aa2.39□□□□□ -2.03
SEC22A-201ENST00000309934 KRTAP12-3P60328 96 aa2.38□□□□□ -2.03
SEC22A-201ENST00000309934 FSIP2Q5CZC0 6907 aa2.38□□□□□ -2.03
SEC22A-201ENST00000309934 LCE3AQ5TA76 89 aa2.37□□□□□ -2.03
SEC22A-201ENST00000309934 KRTAP8-1Q8IUC2 63 aa2.37□□□□□ -2.03
SEC22A-201ENST00000309934 MT1XP80297 61 aa2.34□□□□□ -2.03
SEC22A-201ENST00000309934 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
SEC22A-201ENST00000309934 RNF213Q63HN8 5207 aa2.32□□□□□ -2.04
SEC22A-201ENST00000309934 KRTAP20-1Q3LI63 56 aa2.31□□□□□ -2.04
SEC22A-201ENST00000309934 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.3□□□□□ -2.04
SEC22A-201ENST00000309934 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
SEC22A-201ENST00000309934 KRTAP19-6Q3LI70 58 aa2.3□□□□□ -2.04
SEC22A-201ENST00000309934 MUC2Q02817 5179 aa2.29□□□□□ -2.04
SEC22A-201ENST00000309934 KRTAP6-3Q3LI67 103 aa2.26□□□□□ -2.05
SEC22A-201ENST00000309934 SPRR2FQ96RM1 72 aa2.24□□□□□ -2.05
SEC22A-201ENST00000309934 SPRR2EP22531 72 aa2.23□□□□□ -2.05
SEC22A-201ENST00000309934 SPRR2BP35325 72 aa2.23□□□□□ -2.05
SEC22A-201ENST00000309934 SPRR2AP35326 72 aa2.23□□□□□ -2.05
SEC22A-201ENST00000309934 KRTAP10-7P60409 375 aaPredicted RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms