RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 Q1T7F1 81 aa7.04□□□□□ -1.28
EIF3F-201ENST00000309828 S4R3F8 94 aa7.04□□□□□ -1.28
EIF3F-201ENST00000309828 LCE2DQ5TA82 110 aaPredicted RBP7.01□□□□□ -1.29
EIF3F-201ENST00000309828 LCA10Q71F78 164 aa6.99□□□□□ -1.29
EIF3F-201ENST00000309828 LINC01558Q9Y6Z2 57 aa6.99□□□□□ -1.29
EIF3F-201ENST00000309828 KRTAP19-2Q3LHN2 52 aa6.98□□□□□ -1.29
EIF3F-201ENST00000309828 KRTAP3-3Q9BYR6 98 aa6.97□□□□□ -1.29
EIF3F-201ENST00000309828 KRTAP9-2Q9BYQ4 174 aa6.91□□□□□ -1.3
EIF3F-201ENST00000309828 CSAG1Q6PB30 78 aa6.9□□□□□ -1.3
EIF3F-201ENST00000309828 PRR15LQ9BU68 103 aa6.89□□□□□ -1.31
EIF3F-201ENST00000309828 A0A1B0GU69 56 aa6.87□□□□□ -1.31
EIF3F-201ENST00000309828 SEC61GP60059 68 aa6.87□□□□□ -1.31
EIF3F-201ENST00000309828 PSPHP1O15172 72 aa6.85□□□□□ -1.31
EIF3F-201ENST00000309828 MUC2Q02817 5179 aa6.84□□□□□ -1.31
EIF3F-201ENST00000309828 LCE2CQ5TA81 110 aa6.83□□□□□ -1.32
EIF3F-201ENST00000309828 LCE2AQ5TA79 106 aaPredicted RBP6.81□□□□□ -1.32
EIF3F-201ENST00000309828 Q5VV11 94 aa6.81□□□□□ -1.32
EIF3F-201ENST00000309828 H0YAA0 97 aa6.78□□□□□ -1.32
EIF3F-201ENST00000309828 KRTAP9-6A0A140TA67 174 aa6.77□□□□□ -1.33
EIF3F-201ENST00000309828 FLGP20930 4061 aaPredicted RBP6.72□□□□□ -1.33
EIF3F-201ENST00000309828 KRTAP3-2Q9BYR7 98 aa6.71□□□□□ -1.34
EIF3F-201ENST00000309828 KRTAP10-6P60371 365 aaPredicted RBP6.7□□□□□ -1.34
EIF3F-201ENST00000309828 MT1HP80294 61 aa6.7□□□□□ -1.34
EIF3F-201ENST00000309828 ADM2Q7Z4H4 148 aa6.7□□□□□ -1.34
EIF3F-201ENST00000309828 FAT4Q6V0I7 4981 aa6.69□□□□□ -1.34
EIF3F-201ENST00000309828 A0A1B0GU33 70 aa6.67□□□□□ -1.34
EIF3F-201ENST00000309828 A6NED7 52 aa6.67□□□□□ -1.34
EIF3F-201ENST00000309828 UQCR11O14957 56 aa6.67□□□□□ -1.34
EIF3F-201ENST00000309828 M0R2T5 61 aa6.64□□□□□ -1.35
EIF3F-201ENST00000309828 P0C880 135 aa6.63□□□□□ -1.35
EIF3F-201ENST00000309828 MIR22HGQ0VDD5 57 aa6.59□□□□□ -1.35
EIF3F-201ENST00000309828 SPATA8Q6RVD6 105 aa6.59□□□□□ -1.35
EIF3F-201ENST00000309828 CDC42SE1Q9NRR8 79 aa6.58□□□□□ -1.36
EIF3F-201ENST00000309828 BRK1Q8WUW1 75 aa6.56□□□□□ -1.36
EIF3F-201ENST00000309828 M0QZ58 72 aa6.55□□□□□ -1.36
EIF3F-201ENST00000309828 CRIPTQ9P021 101 aa6.51□□□□□ -1.37
EIF3F-201ENST00000309828 KRTAP13-4Q3LI77 160 aa6.48□□□□□ -1.37
EIF3F-201ENST00000309828 CRCT1Q9UGL9 99 aa6.48□□□□□ -1.37
EIF3F-201ENST00000309828 R4GN34 69 aa6.48□□□□□ -1.37
EIF3F-201ENST00000309828 KRTAP9-8Q9BYQ0 159 aa6.45□□□□□ -1.38
EIF3F-201ENST00000309828 LORP23490 312 aaPredicted RBP6.44□□□□□ -1.38
EIF3F-201ENST00000309828 PRO0628Q9UI54 55 aa6.44□□□□□ -1.38
EIF3F-201ENST00000309828 A8MU10 97 aa6.43□□□□□ -1.38
EIF3F-201ENST00000309828 MT2AP02795 61 aa6.43□□□□□ -1.38
EIF3F-201ENST00000309828 FSIP2Q5CZC0 6907 aa6.38□□□□□ -1.39
EIF3F-201ENST00000309828 MT1FP04733 61 aa6.38□□□□□ -1.39
EIF3F-201ENST00000309828 KRTAP10-10P60014 251 aa6.38□□□□□ -1.39
EIF3F-201ENST00000309828 A0A0D9SG42 100 aa6.36□□□□□ -1.39
EIF3F-201ENST00000309828 K7ERS5 55 aa6.34□□□□□ -1.39
EIF3F-201ENST00000309828 SPRR2GQ9BYE4 73 aa6.33□□□□□ -1.4
EIF3F-201ENST00000309828 A6NN06 94 aa6.31□□□□□ -1.4
EIF3F-201ENST00000309828 LINC01554Q52M75 96 aa6.31□□□□□ -1.4
EIF3F-201ENST00000309828 KRTAP12-1P59990 96 aa6.27□□□□□ -1.41
EIF3F-201ENST00000309828 KRTAP19-1Q8IUB9 90 aa6.27□□□□□ -1.41
EIF3F-201ENST00000309828 SPINT4Q6UDR6 99 aa6.24□□□□□ -1.41
EIF3F-201ENST00000309828 KRTAP12-2P59991 146 aa6.23□□□□□ -1.41
EIF3F-201ENST00000309828 PMAIP1Q13794 54 aa6.22□□□□□ -1.41
EIF3F-201ENST00000309828 KRTAP9-3Q9BYQ3 159 aa6.22□□□□□ -1.41
EIF3F-201ENST00000309828 KRTAP19-8Q3LI54 63 aa6.17□□□□□ -1.42
EIF3F-201ENST00000309828 PLAC4Q8WY50 150 aa6.12□□□□□ -1.43
EIF3F-201ENST00000309828 CAMK2N1Q7Z7J9 78 aa6.07□□□□□ -1.44
EIF3F-201ENST00000309828 KRTAP9-7A8MTY7 169 aa6.06□□□□□ -1.44
EIF3F-201ENST00000309828 MT1BP07438 61 aa6.05□□□□□ -1.44
EIF3F-201ENST00000309828 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.04□□□□□ -1.44
EIF3F-201ENST00000309828 ROMO1P60602 79 aa6.04□□□□□ -1.44
EIF3F-201ENST00000309828 LCE2BO14633 110 aa6.03□□□□□ -1.44
EIF3F-201ENST00000309828 KTN1-AS1Q86SY8 53 aa5.97□□□□□ -1.45
EIF3F-201ENST00000309828 C10orf95Q9H7T3 257 aa5.92□□□□□ -1.46
EIF3F-201ENST00000309828 USH2AO75445 5202 aa5.88□□□□□ -1.47
EIF3F-201ENST00000309828 SSPOA2VEC9 5147 aa5.87□□□□□ -1.47
EIF3F-201ENST00000309828 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
EIF3F-201ENST00000309828 KRTAP10-5P60370 271 aa5.84□□□□□ -1.47
EIF3F-201ENST00000309828 MT1XP80297 61 aa5.84□□□□□ -1.47
EIF3F-201ENST00000309828 KRTAP25-1Q3LHN0 102 aa5.83□□□□□ -1.48
EIF3F-201ENST00000309828 FCGBPQ9Y6R7 5405 aaPredicted RBP5.83□□□□□ -1.48
EIF3F-201ENST00000309828 SVIPQ8NHG7 77 aa5.82□□□□□ -1.48
EIF3F-201ENST00000309828 TNP1P09430 55 aa5.8□□□□□ -1.48
EIF3F-201ENST00000309828 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
EIF3F-201ENST00000309828 KRTAP4-6Q9BYQ5 205 aa5.79□□□□□ -1.48
EIF3F-201ENST00000309828 PRAC1Q96KF2 57 aa5.78□□□□□ -1.48
EIF3F-201ENST00000309828 KRTAP19-6Q3LI70 58 aa5.72□□□□□ -1.49
EIF3F-201ENST00000309828 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
EIF3F-201ENST00000309828 PP632Q6XCG6 107 aa5.65□□□□□ -1.5
EIF3F-201ENST00000309828 MACF1Q9UPN3 7388 aaKnown RBP5.63□□□□□ -1.51
EIF3F-201ENST00000309828 SYNE2Q8WXH0 6885 aaKnown RBP5.62□□□□□ -1.51
EIF3F-201ENST00000309828 KRTAP10-7P60409 375 aaPredicted RBP5.58□□□□□ -1.52
EIF3F-201ENST00000309828 KRTAP10-12P60413 245 aa5.57□□□□□ -1.52
EIF3F-201ENST00000309828 KRTAP6-3Q3LI67 103 aa5.57□□□□□ -1.52
EIF3F-201ENST00000309828 LCE3AQ5TA76 89 aa5.5□□□□□ -1.53
EIF3F-201ENST00000309828 KRTAP8-1Q8IUC2 63 aa5.44□□□□□ -1.54
EIF3F-201ENST00000309828 KRTAP4-8A0A0G2JLE6 195 aa5.34□□□□□ -1.55
EIF3F-201ENST00000309828 KRTAP4-8Q9BYQ9 185 aa5.34□□□□□ -1.55
EIF3F-201ENST00000309828 NEBP20929 6669 aa5.33□□□□□ -1.56
EIF3F-201ENST00000309828 KRTAP12-3P60328 96 aa5.31□□□□□ -1.56
EIF3F-201ENST00000309828 KRTAP20-1Q3LI63 56 aa5.28□□□□□ -1.56
EIF3F-201ENST00000309828 KRTAP19-5Q3LI72 72 aa5.27□□□□□ -1.57
EIF3F-201ENST00000309828 MUC12Q9UKN1 5478 aa5.24□□□□□ -1.57
EIF3F-201ENST00000309828 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.58
EIF3F-201ENST00000309828 KRTAP19-7Q3SYF9 63 aa5.21□□□□□ -1.58
EIF3F-201ENST00000309828 KRTAP5-9P26371 169 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms