RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 DMBT1Q9UGM3 2413 aaPredicted RBP10.97□□□□□ -0.65
RELA-201ENST00000308639 A0A1B0GU33 70 aa10.92□□□□□ -0.66
RELA-201ENST00000308639 COX6B2Q6YFQ2 88 aa10.91□□□□□ -0.66
RELA-201ENST00000308639 H1FX-AS1Q4G0G2 97 aa10.87□□□□□ -0.67
RELA-201ENST00000308639 Q5VSD8 79 aa10.82□□□□□ -0.68
RELA-201ENST00000308639 KRTAP10-8P60410 259 aa10.81□□□□□ -0.68
RELA-201ENST00000308639 KRTAP17-1Q9BYP8 105 aa10.81□□□□□ -0.68
RELA-201ENST00000308639 P0C880 135 aa10.78□□□□□ -0.68
RELA-201ENST00000308639 RYR1P21817 5038 aa10.77□□□□□ -0.69
RELA-201ENST00000308639 CRIPTQ9P021 101 aa10.75□□□□□ -0.69
RELA-201ENST00000308639 KIAA1109Q2LD37 5005 aa10.74□□□□□ -0.69
RELA-201ENST00000308639 XP32Q5T750 250 aa10.72□□□□□ -0.69
RELA-201ENST00000308639 RPL37P61927 97 aaKnown RBP10.71□□□□□ -0.69
RELA-201ENST00000308639 KRTAP3-3Q9BYR6 98 aa10.71□□□□□ -0.69
RELA-201ENST00000308639 LPAP08519 4548 aa10.68□□□□□ -0.7
RELA-201ENST00000308639 EPPK1P58107 5090 aaKnown RBP10.68□□□□□ -0.7
RELA-201ENST00000308639 K7ERS5 55 aa10.64□□□□□ -0.71
RELA-201ENST00000308639 KRTAP10-6P60371 365 aaPredicted RBP10.63□□□□□ -0.71
RELA-201ENST00000308639 KRTAP13-4Q3LI77 160 aa10.61□□□□□ -0.71
RELA-201ENST00000308639 LRP2P98164 4655 aa10.56□□□□□ -0.72
RELA-201ENST00000308639 A0A0D9SG42 100 aa10.56□□□□□ -0.72
RELA-201ENST00000308639 KRTAP3-2Q9BYR7 98 aa10.55□□□□□ -0.72
RELA-201ENST00000308639 S4R3F8 94 aa10.55□□□□□ -0.72
RELA-201ENST00000308639 MT1HL1P0DM35 61 aa10.53□□□□□ -0.72
RELA-201ENST00000308639 SPINT4Q6UDR6 99 aa10.48□□□□□ -0.73
RELA-201ENST00000308639 ABCA13Q86UQ4 5058 aa10.43□□□□□ -0.74
RELA-201ENST00000308639 TPRXLQ17RH7 258 aa10.38□□□□□ -0.75
RELA-201ENST00000308639 NDUFAF8A1L188 74 aa10.35□□□□□ -0.75
RELA-201ENST00000308639 KRTAP15-1Q3LI76 137 aa10.29□□□□□ -0.76
RELA-201ENST00000308639 KRTAP4-5Q9BYR2 181 aa10.25□□□□□ -0.77
RELA-201ENST00000308639 KRTAP12-2P59991 146 aa10.23□□□□□ -0.77
RELA-201ENST00000308639 C10orf95Q9H7T3 257 aa10.23□□□□□ -0.77
RELA-201ENST00000308639 KRTAP12-1P59990 96 aa10.1□□□□□ -0.79
RELA-201ENST00000308639 BIRC6Q9NR09 4857 aa10.08□□□□□ -0.8
RELA-201ENST00000308639 MUC17Q685J3 4493 aa9.99□□□□□ -0.81
RELA-201ENST00000308639 HERC2O95714 4834 aa9.98□□□□□ -0.81
RELA-201ENST00000308639 A0A0A0MQY5 61 aa9.94□□□□□ -0.82
RELA-201ENST00000308639 M0QZ58 72 aa9.93□□□□□ -0.82
RELA-201ENST00000308639 KRTAP4-1Q9BYQ7 146 aa9.92□□□□□ -0.82
RELA-201ENST00000308639 LORP23490 312 aaPredicted RBP9.87□□□□□ -0.83
RELA-201ENST00000308639 MUC2Q02817 5179 aa9.82□□□□□ -0.84
RELA-201ENST00000308639 J3QL48 77 aa9.81□□□□□ -0.84
RELA-201ENST00000308639 R4GN34 69 aa9.81□□□□□ -0.84
RELA-201ENST00000308639 SEC61BP60468 96 aaKnown RBP9.79□□□□□ -0.84
RELA-201ENST00000308639 PCLOQ9Y6V0 5065 aa9.77□□□□□ -0.85
RELA-201ENST00000308639 LUZP6Q538Z0 58 aa9.65□□□□□ -0.87
RELA-201ENST00000308639 KRTAP19-2Q3LHN2 52 aa9.64□□□□□ -0.87
RELA-201ENST00000308639 HERC1Q15751 4861 aa9.59□□□□□ -0.87
RELA-201ENST00000308639 PLAC4Q8WY50 150 aa9.49□□□□□ -0.89
RELA-201ENST00000308639 FLGP20930 4061 aaPredicted RBP9.41□□□□□ -0.9
RELA-201ENST00000308639 FAT4Q6V0I7 4981 aa9.34□□□□□ -0.91
RELA-201ENST00000308639 CAMK2N1Q7Z7J9 78 aa9.34□□□□□ -0.91
RELA-201ENST00000308639 HMCN2Q8NDA2 5059 aa9.33□□□□□ -0.92
RELA-201ENST00000308639 RNF213Q63HN8 5207 aa9.12□□□□□ -0.95
RELA-201ENST00000308639 UBR4Q5T4S7 5183 aa9.08□□□□□ -0.96
RELA-201ENST00000308639 LCE2CQ5TA81 110 aa9.07□□□□□ -0.96
RELA-201ENST00000308639 PP632Q6XCG6 107 aa9.03□□□□□ -0.96
RELA-201ENST00000308639 TNP1P09430 55 aa8.91□□□□□ -0.98
RELA-201ENST00000308639 M0R2T5 61 aa8.9□□□□□ -0.98
RELA-201ENST00000308639 KRTAP19-1Q8IUB9 90 aa8.87□□□□□ -0.99
RELA-201ENST00000308639 MT1HP80294 61 aa8.81□□□□□ -1
RELA-201ENST00000308639 SPRR2GQ9BYE4 73 aa8.81□□□□□ -1
RELA-201ENST00000308639 MT1FP04733 61 aa8.73□□□□□ -1.01
RELA-201ENST00000308639 SPRR5A0A1B0GTR4 108 aa8.7□□□□□ -1.02
RELA-201ENST00000308639 MT2AP02795 61 aa8.69□□□□□ -1.02
RELA-201ENST00000308639 KRTAP10-10P60014 251 aa8.69□□□□□ -1.02
RELA-201ENST00000308639 KRTAP9-8Q9BYQ0 159 aa8.61□□□□□ -1.03
RELA-201ENST00000308639 KRTAP23-1A1A580 65 aa8.61□□□□□ -1.03
RELA-201ENST00000308639 LCE3AQ5TA76 89 aa8.57□□□□□ -1.04
RELA-201ENST00000308639 PRO2289Q9P1D8 64 aa8.5□□□□□ -1.05
RELA-201ENST00000308639 MT1BP07438 61 aa8.41□□□□□ -1.06
RELA-201ENST00000308639 KRTAP19-8Q3LI54 63 aa8.4□□□□□ -1.07
RELA-201ENST00000308639 KRTAP10-5P60370 271 aa8.37□□□□□ -1.07
RELA-201ENST00000308639 MT1XP80297 61 aa8.36□□□□□ -1.07
RELA-201ENST00000308639 INE1O15225 51 aa8.26□□□□□ -1.09
RELA-201ENST00000308639 KRTAP9-3Q9BYQ3 159 aa8.23□□□□□ -1.09
RELA-201ENST00000308639 KRTAP8-1Q8IUC2 63 aa8.22□□□□□ -1.09
RELA-201ENST00000308639 KRTAP10-7P60409 375 aaPredicted RBP8.2□□□□□ -1.1
RELA-201ENST00000308639 USH2AO75445 5202 aa8.17□□□□□ -1.1
RELA-201ENST00000308639 KRTAP10-12P60413 245 aa8.16□□□□□ -1.1
RELA-201ENST00000308639 KRTAP12-3P60328 96 aa8.09□□□□□ -1.11
RELA-201ENST00000308639 LCE2AQ5TA79 106 aaPredicted RBP8.06□□□□□ -1.12
RELA-201ENST00000308639 KMT2DO14686 5537 aa8.05□□□□□ -1.12
RELA-201ENST00000308639 LCE2BO14633 110 aa7.97□□□□□ -1.13
RELA-201ENST00000308639 KRTAP19-5Q3LI72 72 aa7.82□□□□□ -1.16
RELA-201ENST00000308639 KRTAP4-8A0A0G2JLE6 195 aa7.76□□□□□ -1.17
RELA-201ENST00000308639 KRTAP4-8Q9BYQ9 185 aa7.76□□□□□ -1.17
RELA-201ENST00000308639 LCE3CQ5T5A8 94 aa7.61□□□□□ -1.19
RELA-201ENST00000308639 FSIP2Q5CZC0 6907 aa7.55□□□□□ -1.2
RELA-201ENST00000308639 KRTAP4-7Q9BYR0 210 aa7.47□□□□□ -1.21
RELA-201ENST00000308639 KRTAP9-6A8MVA2 160 aa7.47□□□□□ -1.21
RELA-201ENST00000308639 KRTAP19-7Q3SYF9 63 aa7.45□□□□□ -1.22
RELA-201ENST00000308639 SSPOA2VEC9 5147 aa7.41□□□□□ -1.22
RELA-201ENST00000308639 MT1LQ93083 61 aa7.21□□□□□ -1.25
RELA-201ENST00000308639 MT1EP04732 61 aa7.2□□□□□ -1.26
RELA-201ENST00000308639 LCE2DQ5TA82 110 aaPredicted RBP7.2□□□□□ -1.26
RELA-201ENST00000308639 FCGBPQ9Y6R7 5405 aaPredicted RBP7.1□□□□□ -1.27
RELA-201ENST00000308639 KRTAP19-6Q3LI70 58 aa7.09□□□□□ -1.27
RELA-201ENST00000308639 MUC12Q9UKN1 5478 aa7.06□□□□□ -1.28
RELA-201ENST00000308639 KRTAP9-2Q9BYQ4 174 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms