RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 PKHD1L1Q86WI1 4243 aa5.79□□□□□ -1.48
APOBEC3F-201ENST00000308521 Q5VSD8 79 aa5.76□□□□□ -1.49
APOBEC3F-201ENST00000308521 MYCBP2O75592 4640 aa5.76□□□□□ -1.49
APOBEC3F-201ENST00000308521 IGKV2D-30A0A075B6S6 120 aa5.75□□□□□ -1.49
APOBEC3F-201ENST00000308521 DMBT1Q9UGM3 2413 aaPredicted RBP5.73□□□□□ -1.49
APOBEC3F-201ENST00000308521 LINC00304Q8N9R0 145 aa5.72□□□□□ -1.49
APOBEC3F-201ENST00000308521 TNXBP22105 4242 aa5.71□□□□□ -1.5
APOBEC3F-201ENST00000308521 P0C880 135 aa5.7□□□□□ -1.5
APOBEC3F-201ENST00000308521 SPINK1P00995 79 aa5.7□□□□□ -1.5
APOBEC3F-201ENST00000308521 FAT3Q8TDW7 4589 aa5.67□□□□□ -1.5
APOBEC3F-201ENST00000308521 Q8N1X5 172 aa5.65□□□□□ -1.51
APOBEC3F-201ENST00000308521 H0YAA0 97 aa5.63□□□□□ -1.51
APOBEC3F-201ENST00000308521 K7ERS5 55 aa5.62□□□□□ -1.51
APOBEC3F-201ENST00000308521 KRTAP4-5Q9BYR2 181 aa5.62□□□□□ -1.51
APOBEC3F-201ENST00000308521 C9orf92A6NGG3 77 aa5.6□□□□□ -1.51
APOBEC3F-201ENST00000308521 KRTAP10-8P60410 259 aa5.6□□□□□ -1.51
APOBEC3F-201ENST00000308521 RPS29P62273 56 aaKnown RBP5.59□□□□□ -1.51
APOBEC3F-201ENST00000308521 A0A1B0GU33 70 aa5.56□□□□□ -1.52
APOBEC3F-201ENST00000308521 C20orf166-AS1Q96NR2 134 aa5.55□□□□□ -1.52
APOBEC3F-201ENST00000308521 ABCA13Q86UQ4 5058 aa5.55□□□□□ -1.52
APOBEC3F-201ENST00000308521 MT1HL1P0DM35 61 aa5.54□□□□□ -1.52
APOBEC3F-201ENST00000308521 H1FX-AS1Q4G0G2 97 aa5.54□□□□□ -1.52
APOBEC3F-201ENST00000308521 SPINT4Q6UDR6 99 aa5.51□□□□□ -1.53
APOBEC3F-201ENST00000308521 HERC2O95714 4834 aa5.5□□□□□ -1.53
APOBEC3F-201ENST00000308521 KRTAP15-1Q3LI76 137 aa5.49□□□□□ -1.53
APOBEC3F-201ENST00000308521 BIRC6Q9NR09 4857 aa5.49□□□□□ -1.53
APOBEC3F-201ENST00000308521 KRTAP3-1Q9BYR8 98 aa5.49□□□□□ -1.53
APOBEC3F-201ENST00000308521 NDUFAF8A1L188 74 aa5.47□□□□□ -1.53
APOBEC3F-201ENST00000308521 LPAP08519 4548 aa5.45□□□□□ -1.54
APOBEC3F-201ENST00000308521 XP32Q5T750 250 aa5.42□□□□□ -1.54
APOBEC3F-201ENST00000308521 COX6B2Q6YFQ2 88 aa5.41□□□□□ -1.54
APOBEC3F-201ENST00000308521 LRP2P98164 4655 aa5.4□□□□□ -1.55
APOBEC3F-201ENST00000308521 CRIPTQ9P021 101 aa5.39□□□□□ -1.55
APOBEC3F-201ENST00000308521 PCLOQ9Y6V0 5065 aa5.38□□□□□ -1.55
APOBEC3F-201ENST00000308521 RPL37P61927 97 aaKnown RBP5.37□□□□□ -1.55
APOBEC3F-201ENST00000308521 TPRXLQ17RH7 258 aa5.37□□□□□ -1.55
APOBEC3F-201ENST00000308521 HERC1Q15751 4861 aa5.32□□□□□ -1.56
APOBEC3F-201ENST00000308521 SEC61BP60468 96 aaKnown RBP5.3□□□□□ -1.56
APOBEC3F-201ENST00000308521 LUZP6Q538Z0 58 aa5.29□□□□□ -1.56
APOBEC3F-201ENST00000308521 KRTAP10-6P60371 365 aaPredicted RBP5.27□□□□□ -1.57
APOBEC3F-201ENST00000308521 MUC2Q02817 5179 aa5.21□□□□□ -1.58
APOBEC3F-201ENST00000308521 KRTAP13-4Q3LI77 160 aa5.21□□□□□ -1.58
APOBEC3F-201ENST00000308521 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
APOBEC3F-201ENST00000308521 C10orf95Q9H7T3 257 aa5.18□□□□□ -1.58
APOBEC3F-201ENST00000308521 S4R3F8 94 aa5.17□□□□□ -1.58
APOBEC3F-201ENST00000308521 A0A0D9SG42 100 aa5.15□□□□□ -1.58
APOBEC3F-201ENST00000308521 HMCN2Q8NDA2 5059 aa5.13□□□□□ -1.59
APOBEC3F-201ENST00000308521 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
APOBEC3F-201ENST00000308521 KRTAP4-6Q9BYQ5 205 aa5.11□□□□□ -1.59
APOBEC3F-201ENST00000308521 MUC17Q685J3 4493 aa5.1□□□□□ -1.59
APOBEC3F-201ENST00000308521 KRTAP4-1Q9BYQ7 146 aa5.09□□□□□ -1.59
APOBEC3F-201ENST00000308521 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
APOBEC3F-201ENST00000308521 KRTAP12-1P59990 96 aa5.03□□□□□ -1.6
APOBEC3F-201ENST00000308521 RNF213Q63HN8 5207 aa5.03□□□□□ -1.6
APOBEC3F-201ENST00000308521 UBR4Q5T4S7 5183 aa5.03□□□□□ -1.6
APOBEC3F-201ENST00000308521 KRTAP19-1Q8IUB9 90 aa5.01□□□□□ -1.61
APOBEC3F-201ENST00000308521 M0QZ58 72 aa5□□□□□ -1.61
APOBEC3F-201ENST00000308521 LCE4AQ5TA78 99 aa5□□□□□ -1.61
APOBEC3F-201ENST00000308521 PLAC4Q8WY50 150 aa4.99□□□□□ -1.61
APOBEC3F-201ENST00000308521 FAT4Q6V0I7 4981 aa4.94□□□□□ -1.62
APOBEC3F-201ENST00000308521 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
APOBEC3F-201ENST00000308521 CAMK2N1Q7Z7J9 78 aa4.9□□□□□ -1.63
APOBEC3F-201ENST00000308521 KRTAP4-8Q9BYQ9 185 aa4.9□□□□□ -1.63
APOBEC3F-201ENST00000308521 KRTAP19-2Q3LHN2 52 aa4.89□□□□□ -1.63
APOBEC3F-201ENST00000308521 KRTAP9-6A0A140TA67 174 aa4.88□□□□□ -1.63
APOBEC3F-201ENST00000308521 KRTAP9-7A8MTY7 169 aa4.88□□□□□ -1.63
APOBEC3F-201ENST00000308521 KRTAP4-12Q9BQ66 201 aa4.88□□□□□ -1.63
APOBEC3F-201ENST00000308521 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.88□□□□□ -1.63
APOBEC3F-201ENST00000308521 KRTAP9-2Q9BYQ4 174 aa4.87□□□□□ -1.63
APOBEC3F-201ENST00000308521 FLGP20930 4061 aaPredicted RBP4.86□□□□□ -1.63
APOBEC3F-201ENST00000308521 PP632Q6XCG6 107 aa4.83□□□□□ -1.64
APOBEC3F-201ENST00000308521 R4GN34 69 aa4.79□□□□□ -1.64
APOBEC3F-201ENST00000308521 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
APOBEC3F-201ENST00000308521 PRO2289Q9P1D8 64 aa4.72□□□□□ -1.65
APOBEC3F-201ENST00000308521 M0R2T5 61 aa4.69□□□□□ -1.66
APOBEC3F-201ENST00000308521 KRTAP9-9Q9BYP9 154 aa4.67□□□□□ -1.66
APOBEC3F-201ENST00000308521 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
APOBEC3F-201ENST00000308521 MT1HP80294 61 aa4.66□□□□□ -1.66
APOBEC3F-201ENST00000308521 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.67
APOBEC3F-201ENST00000308521 INE1O15225 51 aa4.59□□□□□ -1.67
APOBEC3F-201ENST00000308521 KRTAP9-3Q9BYQ3 159 aa4.58□□□□□ -1.68
APOBEC3F-201ENST00000308521 KRTAP10-10P60014 251 aa4.5□□□□□ -1.69
APOBEC3F-201ENST00000308521 KRTAP9-8Q9BYQ0 159 aa4.5□□□□□ -1.69
APOBEC3F-201ENST00000308521 MT2AP02795 61 aa4.49□□□□□ -1.69
APOBEC3F-201ENST00000308521 MT1FP04733 61 aa4.49□□□□□ -1.69
APOBEC3F-201ENST00000308521 TNP1P09430 55 aa4.45□□□□□ -1.7
APOBEC3F-201ENST00000308521 KRTAP4-8A0A0G2JLE6 195 aa4.4□□□□□ -1.71
APOBEC3F-201ENST00000308521 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
APOBEC3F-201ENST00000308521 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
APOBEC3F-201ENST00000308521 SPRR2GQ9BYE4 73 aa4.38□□□□□ -1.71
APOBEC3F-201ENST00000308521 USH2AO75445 5202 aa4.35□□□□□ -1.71
APOBEC3F-201ENST00000308521 MT1BP07438 61 aa4.25□□□□□ -1.73
APOBEC3F-201ENST00000308521 FSIP2Q5CZC0 6907 aa4.24□□□□□ -1.73
APOBEC3F-201ENST00000308521 KRTAP19-8Q3LI54 63 aa4.23□□□□□ -1.73
APOBEC3F-201ENST00000308521 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
APOBEC3F-201ENST00000308521 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
APOBEC3F-201ENST00000308521 LCE3AQ5TA76 89 aa4.17□□□□□ -1.74
APOBEC3F-201ENST00000308521 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.74
APOBEC3F-201ENST00000308521 MT1XP80297 61 aa4.13□□□□□ -1.75
APOBEC3F-201ENST00000308521 KRTAP10-5P60370 271 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms