RNA–Protein interactions for RNA: ENST00000304516.11

INO80E-201, Transcript of INO80 complex subunit E, humanhuman

TSL 2 BASIC

Gene INO80E, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-201ENST00000304516 SNURFQ9Y675 71 aa8.53□□□□□ -1.04
INO80E-201ENST00000304516 COX7CP15954 63 aa8.52□□□□□ -1.05
INO80E-201ENST00000304516 SVIPQ8NHG7 77 aa8.49□□□□□ -1.05
INO80E-201ENST00000304516 KRTAP9-3Q9BYQ3 159 aa8.48□□□□□ -1.05
INO80E-201ENST00000304516 USH2AO75445 5202 aa8.48□□□□□ -1.05
INO80E-201ENST00000304516 A8MUN3 132 aa8.45□□□□□ -1.06
INO80E-201ENST00000304516 LCE2BO14633 110 aa8.44□□□□□ -1.06
INO80E-201ENST00000304516 S4R3F8 94 aa8.43□□□□□ -1.06
INO80E-201ENST00000304516 SSPOA2VEC9 5147 aa8.41□□□□□ -1.06
INO80E-201ENST00000304516 LCA10Q71F78 164 aa8.38□□□□□ -1.07
INO80E-201ENST00000304516 DMAC1Q96GE9 116 aa8.37□□□□□ -1.07
INO80E-201ENST00000304516 KRTAP3-3Q9BYR6 98 aa8.35□□□□□ -1.07
INO80E-201ENST00000304516 NDUFC1O43677 76 aa8.34□□□□□ -1.07
INO80E-201ENST00000304516 SPANXA2-OT1Q8N9U9 137 aa8.32□□□□□ -1.08
INO80E-201ENST00000304516 CCDC179H3BU77 68 aa8.31□□□□□ -1.08
INO80E-201ENST00000304516 ACYP2P14621 99 aa8.29□□□□□ -1.08
INO80E-201ENST00000304516 CSAG1Q6PB30 78 aa8.29□□□□□ -1.08
INO80E-201ENST00000304516 KRTAP19-1Q8IUB9 90 aa8.27□□□□□ -1.09
INO80E-201ENST00000304516 CYSTM1Q9H1C7 97 aa8.27□□□□□ -1.09
INO80E-201ENST00000304516 H7BZZ5 65 aa8.26□□□□□ -1.09
INO80E-201ENST00000304516 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.21□□□□□ -1.09
INO80E-201ENST00000304516 FCGBPQ9Y6R7 5405 aaPredicted RBP8.2□□□□□ -1.1
INO80E-201ENST00000304516 CHKB-CPT1BH3BT56 60 aa8.19□□□□□ -1.1
INO80E-201ENST00000304516 SPTSSBQ8NFR3 76 aa8.12□□□□□ -1.11
INO80E-201ENST00000304516 KRTAP19-6Q3LI70 58 aa8.11□□□□□ -1.11
INO80E-201ENST00000304516 KRTAP9-7A8MTY7 169 aa8.08□□□□□ -1.12
INO80E-201ENST00000304516 COA5Q86WW8 74 aa8.08□□□□□ -1.12
INO80E-201ENST00000304516 ATP5EP56381 51 aaPredicted RBP8.06□□□□□ -1.12
INO80E-201ENST00000304516 TMEM258P61165 79 aa8.04□□□□□ -1.12
INO80E-201ENST00000304516 H0YAA0 97 aa8.02□□□□□ -1.13
INO80E-201ENST00000304516 SPRR2GQ9BYE4 73 aa7.99□□□□□ -1.13
INO80E-201ENST00000304516 ADM2Q7Z4H4 148 aa7.98□□□□□ -1.13
INO80E-201ENST00000304516 MACF1Q9UPN3 7388 aaKnown RBP7.94□□□□□ -1.14
INO80E-201ENST00000304516 MT1BP07438 61 aa7.89□□□□□ -1.15
INO80E-201ENST00000304516 KRTAP19-8Q3LI54 63 aa7.89□□□□□ -1.15
INO80E-201ENST00000304516 CRIPTQ9P021 101 aa7.88□□□□□ -1.15
INO80E-201ENST00000304516 KRTAP3-2Q9BYR7 98 aa7.87□□□□□ -1.15
INO80E-201ENST00000304516 P0C880 135 aa7.87□□□□□ -1.15
INO80E-201ENST00000304516 Q5VV11 94 aa7.86□□□□□ -1.15
INO80E-201ENST00000304516 SYNE2Q8WXH0 6885 aaKnown RBP7.81□□□□□ -1.16
INO80E-201ENST00000304516 SEC61GP60059 68 aa7.8□□□□□ -1.16
INO80E-201ENST00000304516 SERP1Q9Y6X1 66 aa7.79□□□□□ -1.16
INO80E-201ENST00000304516 A6NN06 94 aa7.76□□□□□ -1.17
INO80E-201ENST00000304516 R4GN34 69 aa7.76□□□□□ -1.17
INO80E-201ENST00000304516 M0QZ58 72 aa7.71□□□□□ -1.18
INO80E-201ENST00000304516 A0A1B0GU69 56 aa7.68□□□□□ -1.18
INO80E-201ENST00000304516 KRTAP10-5P60370 271 aa7.67□□□□□ -1.18
INO80E-201ENST00000304516 KRTAP6-3Q3LI67 103 aa7.66□□□□□ -1.18
INO80E-201ENST00000304516 PRR15LQ9BU68 103 aa7.62□□□□□ -1.19
INO80E-201ENST00000304516 LINC01558Q9Y6Z2 57 aa7.61□□□□□ -1.19
INO80E-201ENST00000304516 LINC01554Q52M75 96 aa7.6□□□□□ -1.19
INO80E-201ENST00000304516 A0A1B0GU33 70 aa7.57□□□□□ -1.2
INO80E-201ENST00000304516 RPS28P62857 69 aaKnown RBP7.52□□□□□ -1.21
INO80E-201ENST00000304516 V9GYY9 64 aa7.52□□□□□ -1.21
INO80E-201ENST00000304516 SMIM26A0A096LP01 95 aa7.51□□□□□ -1.21
INO80E-201ENST00000304516 KRTAP13-4Q3LI77 160 aa7.51□□□□□ -1.21
INO80E-201ENST00000304516 PLAC4Q8WY50 150 aa7.49□□□□□ -1.21
INO80E-201ENST00000304516 MT1XP80297 61 aa7.47□□□□□ -1.21
INO80E-201ENST00000304516 Q1T7F1 81 aa7.46□□□□□ -1.22
INO80E-201ENST00000304516 SPATA8Q6RVD6 105 aa7.46□□□□□ -1.22
INO80E-201ENST00000304516 A0A0D9SG42 100 aa7.41□□□□□ -1.22
INO80E-201ENST00000304516 PSPHP1O15172 72 aa7.4□□□□□ -1.22
INO80E-201ENST00000304516 PRO2289Q9P1D8 64 aa7.38□□□□□ -1.23
INO80E-201ENST00000304516 UQCR11O14957 56 aa7.36□□□□□ -1.23
INO80E-201ENST00000304516 MUC12Q9UKN1 5478 aa7.34□□□□□ -1.23
INO80E-201ENST00000304516 KRTAP5-9P26371 169 aa7.34□□□□□ -1.23
INO80E-201ENST00000304516 A8MU10 97 aa7.29□□□□□ -1.24
INO80E-201ENST00000304516 NEBP20929 6669 aa7.28□□□□□ -1.24
INO80E-201ENST00000304516 SPINT4Q6UDR6 99 aa7.28□□□□□ -1.24
INO80E-201ENST00000304516 KMT2DO14686 5537 aa7.26□□□□□ -1.25
INO80E-201ENST00000304516 MIR22HGQ0VDD5 57 aa7.24□□□□□ -1.25
INO80E-201ENST00000304516 CAMK2N1Q7Z7J9 78 aa7.24□□□□□ -1.25
INO80E-201ENST00000304516 KRTAP12-1P59990 96 aa7.21□□□□□ -1.26
INO80E-201ENST00000304516 A6NED7 52 aa7.19□□□□□ -1.26
INO80E-201ENST00000304516 KRTAP12-2P59991 146 aa7.17□□□□□ -1.26
INO80E-201ENST00000304516 SPRR2FQ96RM1 72 aa7.16□□□□□ -1.26
INO80E-201ENST00000304516 MDN1Q9NU22 5596 aa7.15□□□□□ -1.26
INO80E-201ENST00000304516 KRTAP10-7P60409 375 aaPredicted RBP7.15□□□□□ -1.27
INO80E-201ENST00000304516 KRTAP8-1Q8IUC2 63 aa7.14□□□□□ -1.27
INO80E-201ENST00000304516 KRTAP4-8A0A0G2JLE6 195 aa7.1□□□□□ -1.27
INO80E-201ENST00000304516 KRTAP4-8Q9BYQ9 185 aa7.1□□□□□ -1.27
INO80E-201ENST00000304516 KRTAP20-1Q3LI63 56 aa7.09□□□□□ -1.27
INO80E-201ENST00000304516 KRTAP10-12P60413 245 aa7.07□□□□□ -1.28
INO80E-201ENST00000304516 K7ERS5 55 aa7.04□□□□□ -1.28
INO80E-201ENST00000304516 SPRR2EP22531 72 aa7.04□□□□□ -1.28
INO80E-201ENST00000304516 SPRR2BP35325 72 aa7.04□□□□□ -1.28
INO80E-201ENST00000304516 SPRR2AP35326 72 aa7.04□□□□□ -1.28
INO80E-201ENST00000304516 PRO0628Q9UI54 55 aa7.03□□□□□ -1.28
INO80E-201ENST00000304516 CDC42SE1Q9NRR8 79 aa6.96□□□□□ -1.3
INO80E-201ENST00000304516 LCE1AQ5T7P2 110 aa6.95□□□□□ -1.3
INO80E-201ENST00000304516 KRTAP2-3P0C7H8 128 aa6.9□□□□□ -1.31
INO80E-201ENST00000304516 KRTAP2-4Q9BYR9 128 aa6.9□□□□□ -1.31
INO80E-201ENST00000304516 C10orf95Q9H7T3 257 aa6.84□□□□□ -1.31
INO80E-201ENST00000304516 SPRR2DP22532 72 aa6.8□□□□□ -1.32
INO80E-201ENST00000304516 TNP1P09430 55 aa6.78□□□□□ -1.32
INO80E-201ENST00000304516 BRK1Q8WUW1 75 aa6.77□□□□□ -1.33
INO80E-201ENST00000304516 KRTAP19-7Q3SYF9 63 aa6.68□□□□□ -1.34
INO80E-201ENST00000304516 KRTAP2-2Q9BYT5 123 aa6.68□□□□□ -1.34
INO80E-201ENST00000304516 KRTAP2-1Q9BYU5 128 aa6.68□□□□□ -1.34
INO80E-201ENST00000304516 KRTAP25-1Q3LHN0 102 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms