RNA–Protein interactions for RNA: ENST00000303391.10

MECP2-201, Transcript of methyl-CpG binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MECP2, Length 10,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-201ENST00000303391 HUWE1Q7Z6Z7 4374 aaKnown RBP4.39□□□□□ -1.71
MECP2-201ENST00000303391 MUC3AQ02505 3323 aa4.38□□□□□ -1.71
MECP2-201ENST00000303391 CSMD3Q7Z407 3707 aa4.35□□□□□ -1.71
MECP2-201ENST00000303391 CUBNO60494 3623 aa4.35□□□□□ -1.71
MECP2-201ENST00000303391 HECTD4Q9Y4D8 3996 aa4.34□□□□□ -1.71
MECP2-201ENST00000303391 DNAH1Q9P2D7 4330 aa4.33□□□□□ -1.72
MECP2-201ENST00000303391 SVEP1Q4LDE5 3571 aa4.32□□□□□ -1.72
MECP2-201ENST00000303391 DNAH2Q9P225 4427 aa4.3□□□□□ -1.72
MECP2-201ENST00000303391 LYSTQ99698 3801 aa4.29□□□□□ -1.72
MECP2-201ENST00000303391 KRTAP8-1Q8IUC2 63 aa4.28□□□□□ -1.72
MECP2-201ENST00000303391 SPRR2GQ9BYE4 73 aa4.28□□□□□ -1.72
MECP2-201ENST00000303391 LORP23490 312 aaPredicted RBP4.27□□□□□ -1.73
MECP2-201ENST00000303391 DNAH6Q9C0G6 4158 aa4.26□□□□□ -1.73
MECP2-201ENST00000303391 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
MECP2-201ENST00000303391 ANK3Q12955 4377 aaKnown RBP4.17□□□□□ -1.74
MECP2-201ENST00000303391 CSMD2Q7Z408 3487 aa4.15□□□□□ -1.75
MECP2-201ENST00000303391 ANK2Q01484 3957 aa4.14□□□□□ -1.75
MECP2-201ENST00000303391 SPRR5A0A1B0GTR4 108 aa4.09□□□□□ -1.75
MECP2-201ENST00000303391 KRTAP10-7P60409 375 aaPredicted RBP4.08□□□□□ -1.76
MECP2-201ENST00000303391 KMT2AQ03164 3969 aa4.08□□□□□ -1.76
MECP2-201ENST00000303391 VPS13BQ7Z7G8 4022 aa4.07□□□□□ -1.76
MECP2-201ENST00000303391 KRTAP19-5Q3LI72 72 aa4.07□□□□□ -1.76
MECP2-201ENST00000303391 DNAH10Q8IVF4 4471 aa4.06□□□□□ -1.76
MECP2-201ENST00000303391 FRAS1Q86XX4 4008 aa3.97□□□□□ -1.77
MECP2-201ENST00000303391 MT2AP02795 61 aa3.96□□□□□ -1.78
MECP2-201ENST00000303391 MT1HP80294 61 aa3.95□□□□□ -1.78
MECP2-201ENST00000303391 KRTAP4-5Q9BYR2 181 aa3.94□□□□□ -1.78
MECP2-201ENST00000303391 PRKDCP78527 4128 aaKnown RBP3.93□□□□□ -1.78
MECP2-201ENST00000303391 FLGP20930 4061 aaPredicted RBP3.92□□□□□ -1.78
MECP2-201ENST00000303391 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
MECP2-201ENST00000303391 DNAH11Q96DT5 4516 aa3.91□□□□□ -1.78
MECP2-201ENST00000303391 KRTAP19-8Q3LI54 63 aa3.88□□□□□ -1.79
MECP2-201ENST00000303391 KRTAP4-1Q9BYQ7 146 aa3.88□□□□□ -1.79
MECP2-201ENST00000303391 VPS13DQ5THJ4 4388 aa3.85□□□□□ -1.79
MECP2-201ENST00000303391 MT1FP04733 61 aa3.83□□□□□ -1.8
MECP2-201ENST00000303391 DYNC2H1Q8NCM8 4307 aaKnown RBP3.83□□□□□ -1.8
MECP2-201ENST00000303391 MT3P25713 68 aa3.83□□□□□ -1.8
MECP2-201ENST00000303391 SPRR2FQ96RM1 72 aa3.81□□□□□ -1.8
MECP2-201ENST00000303391 FAT2Q9NYQ8 4349 aa3.81□□□□□ -1.8
MECP2-201ENST00000303391 LRP1Q07954 4544 aaKnown RBP3.78□□□□□ -1.8
MECP2-201ENST00000303391 DNAH17Q9UFH2 4485 aa3.76□□□□□ -1.81
MECP2-201ENST00000303391 DNAH8Q96JB1 4490 aa3.75□□□□□ -1.81
MECP2-201ENST00000303391 LCE3BQ5TA77 95 aa3.74□□□□□ -1.81
MECP2-201ENST00000303391 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
MECP2-201ENST00000303391 DNAH9Q9NYC9 4486 aa3.73□□□□□ -1.81
MECP2-201ENST00000303391 MT1XP80297 61 aa3.72□□□□□ -1.81
MECP2-201ENST00000303391 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
MECP2-201ENST00000303391 KRTAP19-1Q8IUB9 90 aa3.72□□□□□ -1.81
MECP2-201ENST00000303391 PKHD1P08F94 4074 aa3.67□□□□□ -1.82
MECP2-201ENST00000303391 MT1GP13640 62 aa3.66□□□□□ -1.82
MECP2-201ENST00000303391 MT1LQ93083 61 aa3.6□□□□□ -1.83
MECP2-201ENST00000303391 DYNC1H1Q14204 4646 aaKnown RBP3.59□□□□□ -1.84
MECP2-201ENST00000303391 DNAH5Q8TE73 4624 aa3.59□□□□□ -1.84
MECP2-201ENST00000303391 LCE2BO14633 110 aa3.54□□□□□ -1.84
MECP2-201ENST00000303391 PKHD1L1Q86WI1 4243 aa3.53□□□□□ -1.84
MECP2-201ENST00000303391 SPRR2EP22531 72 aa3.53□□□□□ -1.85
MECP2-201ENST00000303391 SPRR2BP35325 72 aa3.53□□□□□ -1.85
MECP2-201ENST00000303391 SPRR2AP35326 72 aa3.53□□□□□ -1.85
MECP2-201ENST00000303391 MT1BP07438 61 aa3.52□□□□□ -1.85
MECP2-201ENST00000303391 HSPG2P98160 4391 aa3.5□□□□□ -1.85
MECP2-201ENST00000303391 STARD9Q9P2P6 4700 aa3.5□□□□□ -1.85
MECP2-201ENST00000303391 PLECQ15149 4684 aaKnown RBP3.49□□□□□ -1.85
MECP2-201ENST00000303391 SACSQ9NZJ4 4579 aa3.49□□□□□ -1.85
MECP2-201ENST00000303391 SPRR2DP22532 72 aa3.45□□□□□ -1.86
MECP2-201ENST00000303391 MT1EP04732 61 aa3.45□□□□□ -1.86
MECP2-201ENST00000303391 KRTAP19-3Q7Z4W3 81 aa3.45□□□□□ -1.86
MECP2-201ENST00000303391 PKD1P98161 4303 aa3.45□□□□□ -1.86
MECP2-201ENST00000303391 APOBP04114 4563 aaKnown RBP3.43□□□□□ -1.86
MECP2-201ENST00000303391 KRTAP9-8Q9BYQ0 159 aa3.42□□□□□ -1.86
MECP2-201ENST00000303391 PRM1P04553 51 aa3.42□□□□□ -1.86
MECP2-201ENST00000303391 KRTAP9-3Q9BYQ3 159 aa3.38□□□□□ -1.87
MECP2-201ENST00000303391 LRP1BQ9NZR2 4599 aa3.36□□□□□ -1.87
MECP2-201ENST00000303391 TNXBP22105 4242 aa3.35□□□□□ -1.87
MECP2-201ENST00000303391 FAT1Q14517 4588 aa3.35□□□□□ -1.87
MECP2-201ENST00000303391 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.88
MECP2-201ENST00000303391 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.88
MECP2-201ENST00000303391 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.88
MECP2-201ENST00000303391 KRTAP4-8A0A0G2JLE6 195 aa3.28□□□□□ -1.88
MECP2-201ENST00000303391 KRTAP4-8Q9BYQ9 185 aa3.28□□□□□ -1.88
MECP2-201ENST00000303391 MT1MQ8N339 61 aa3.27□□□□□ -1.89
MECP2-201ENST00000303391 MT1AP04731 61 aa3.25□□□□□ -1.89
MECP2-201ENST00000303391 LCE2CQ5TA81 110 aa3.24□□□□□ -1.89
MECP2-201ENST00000303391 FAT3Q8TDW7 4589 aa3.2□□□□□ -1.9
MECP2-201ENST00000303391 MYCBP2O75592 4640 aa3.18□□□□□ -1.9
MECP2-201ENST00000303391 RYR1P21817 5038 aa3.14□□□□□ -1.91
MECP2-201ENST00000303391 LCE2DQ5TA82 110 aaPredicted RBP3.14□□□□□ -1.91
MECP2-201ENST00000303391 KRTAP4-7Q9BYR0 210 aa3.13□□□□□ -1.91
MECP2-201ENST00000303391 KRTAP19-2Q3LHN2 52 aa3.08□□□□□ -1.92
MECP2-201ENST00000303391 KRTAP19-6Q3LI70 58 aa3.06□□□□□ -1.92
MECP2-201ENST00000303391 DNHD1Q96M86 4753 aa3.06□□□□□ -1.92
MECP2-201ENST00000303391 LCE1DQ5T752 114 aa3.02□□□□□ -1.93
MECP2-201ENST00000303391 LOC100996750A0A140TA64 210 aa3.01□□□□□ -1.93
MECP2-201ENST00000303391 KRTAP19-7Q3SYF9 63 aa3.01□□□□□ -1.93
MECP2-201ENST00000303391 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
MECP2-201ENST00000303391 RYR3Q15413 4870 aa2.98□□□□□ -1.93
MECP2-201ENST00000303391 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
MECP2-201ENST00000303391 MUC17Q685J3 4493 aa2.95□□□□□ -1.94
MECP2-201ENST00000303391 KRTAP17-1Q9BYP8 105 aa2.93□□□□□ -1.94
MECP2-201ENST00000303391 MT4P47944 62 aa2.92□□□□□ -1.94
MECP2-201ENST00000303391 LCE1AQ5T7P2 110 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms