RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 LCA10Q71F78 164 aa13.35□□□□□ -0.27
SDCCAG3-201ENST00000298537 RBM12B-AS1Q9P1G2 102 aa13.33□□□□□ -0.28
SDCCAG3-201ENST00000298537 SPTSSBQ8NFR3 76 aa13.31□□□□□ -0.28
SDCCAG3-201ENST00000298537 A6NN06 94 aa13.27□□□□□ -0.29
SDCCAG3-201ENST00000298537 HERC1Q15751 4861 aa13.25□□□□□ -0.29
SDCCAG3-201ENST00000298537 A6NED7 52 aa13.23□□□□□ -0.29
SDCCAG3-201ENST00000298537 COX6B2Q6YFQ2 88 aa13.19□□□□□ -0.3
SDCCAG3-201ENST00000298537 CDC42SE1Q9NRR8 79 aa13.17□□□□□ -0.3
SDCCAG3-201ENST00000298537 LINC01558Q9Y6Z2 57 aa13.14□□□□□ -0.31
SDCCAG3-201ENST00000298537 HMCN2Q8NDA2 5059 aa13.01□□□□□ -0.33
SDCCAG3-201ENST00000298537 MUC17Q685J3 4493 aa12.98□□□□□ -0.33
SDCCAG3-201ENST00000298537 KRTAP4-1Q9BYQ7 146 aa12.96□□□□□ -0.34
SDCCAG3-201ENST00000298537 MUC2Q02817 5179 aa12.91□□□□□ -0.34
SDCCAG3-201ENST00000298537 SEC61BP60468 96 aaKnown RBP12.9□□□□□ -0.34
SDCCAG3-201ENST00000298537 A0A1B0GU69 56 aa12.88□□□□□ -0.35
SDCCAG3-201ENST00000298537 KRTAP3-3Q9BYR6 98 aa12.88□□□□□ -0.35
SDCCAG3-201ENST00000298537 S4R3F8 94 aa12.78□□□□□ -0.36
SDCCAG3-201ENST00000298537 H1FX-AS1Q4G0G2 97 aa12.77□□□□□ -0.37
SDCCAG3-201ENST00000298537 PRAC1Q96KF2 57 aa12.72□□□□□ -0.37
SDCCAG3-201ENST00000298537 ADM2Q7Z4H4 148 aa12.65□□□□□ -0.39
SDCCAG3-201ENST00000298537 KRTAP19-2Q3LHN2 52 aa12.57□□□□□ -0.4
SDCCAG3-201ENST00000298537 UBR4Q5T4S7 5183 aa12.55□□□□□ -0.4
SDCCAG3-201ENST00000298537 LINC01554Q52M75 96 aa12.52□□□□□ -0.41
SDCCAG3-201ENST00000298537 UQCR11O14957 56 aa12.49□□□□□ -0.41
SDCCAG3-201ENST00000298537 KRTAP10-6P60371 365 aaPredicted RBP12.48□□□□□ -0.41
SDCCAG3-201ENST00000298537 KRTAP3-2Q9BYR7 98 aa12.48□□□□□ -0.41
SDCCAG3-201ENST00000298537 SPATA8Q6RVD6 105 aa12.45□□□□□ -0.42
SDCCAG3-201ENST00000298537 RNF213Q63HN8 5207 aa12.45□□□□□ -0.42
SDCCAG3-201ENST00000298537 MIR22HGQ0VDD5 57 aa12.44□□□□□ -0.42
SDCCAG3-201ENST00000298537 A0A1B0GU33 70 aa12.42□□□□□ -0.42
SDCCAG3-201ENST00000298537 CSAG1Q6PB30 78 aa12.4□□□□□ -0.42
SDCCAG3-201ENST00000298537 P0C880 135 aa12.39□□□□□ -0.43
SDCCAG3-201ENST00000298537 H0YAA0 97 aa12.39□□□□□ -0.43
SDCCAG3-201ENST00000298537 H3BS24 57 aa12.33□□□□□ -0.44
SDCCAG3-201ENST00000298537 FAT4Q6V0I7 4981 aa12.33□□□□□ -0.44
SDCCAG3-201ENST00000298537 FLGP20930 4061 aaPredicted RBP12.32□□□□□ -0.44
SDCCAG3-201ENST00000298537 KRTAP13-4Q3LI77 160 aa12.27□□□□□ -0.44
SDCCAG3-201ENST00000298537 LCE2CQ5TA81 110 aa12.16□□□□□ -0.46
SDCCAG3-201ENST00000298537 A0A0D9SG42 100 aa12.05□□□□□ -0.48
SDCCAG3-201ENST00000298537 LORP23490 312 aaPredicted RBP12.03□□□□□ -0.48
SDCCAG3-201ENST00000298537 MT1HP80294 61 aa11.86□□□□□ -0.51
SDCCAG3-201ENST00000298537 M0QZ58 72 aa11.85□□□□□ -0.51
SDCCAG3-201ENST00000298537 KRTAP25-1Q3LHN0 102 aa11.81□□□□□ -0.52
SDCCAG3-201ENST00000298537 R4GN34 69 aa11.8□□□□□ -0.52
SDCCAG3-201ENST00000298537 KRTAP12-2P59991 146 aa11.76□□□□□ -0.53
SDCCAG3-201ENST00000298537 M0R2T5 61 aa11.75□□□□□ -0.53
SDCCAG3-201ENST00000298537 ROMO1P60602 79 aa11.74□□□□□ -0.53
SDCCAG3-201ENST00000298537 KRTAP12-1P59990 96 aa11.7□□□□□ -0.54
SDCCAG3-201ENST00000298537 SPINT4Q6UDR6 99 aa11.68□□□□□ -0.54
SDCCAG3-201ENST00000298537 K7ERS5 55 aa11.65□□□□□ -0.54
SDCCAG3-201ENST00000298537 KRTAP9-8Q9BYQ0 159 aa11.48□□□□□ -0.57
SDCCAG3-201ENST00000298537 MT2AP02795 61 aa11.47□□□□□ -0.57
SDCCAG3-201ENST00000298537 CRIPTQ9P021 101 aa11.46□□□□□ -0.57
SDCCAG3-201ENST00000298537 MT1FP04733 61 aa11.46□□□□□ -0.58
SDCCAG3-201ENST00000298537 KRTAP10-10P60014 251 aa11.36□□□□□ -0.59
SDCCAG3-201ENST00000298537 KRTAP19-1Q8IUB9 90 aa11.34□□□□□ -0.59
SDCCAG3-201ENST00000298537 SPRR2GQ9BYE4 73 aa11.26□□□□□ -0.61
SDCCAG3-201ENST00000298537 LCE2AQ5TA79 106 aaPredicted RBP11.15□□□□□ -0.62
SDCCAG3-201ENST00000298537 C10orf95Q9H7T3 257 aa11.1□□□□□ -0.63
SDCCAG3-201ENST00000298537 CAMK2N1Q7Z7J9 78 aa11.09□□□□□ -0.63
SDCCAG3-201ENST00000298537 KRTAP9-3Q9BYQ3 159 aa11.03□□□□□ -0.64
SDCCAG3-201ENST00000298537 KRTAP15-1Q3LI76 137 aa10.97□□□□□ -0.65
SDCCAG3-201ENST00000298537 NDUFAF8A1L188 74 aa10.93□□□□□ -0.66
SDCCAG3-201ENST00000298537 PLAC4Q8WY50 150 aa10.91□□□□□ -0.66
SDCCAG3-201ENST00000298537 KRTAP19-8Q3LI54 63 aa10.91□□□□□ -0.66
SDCCAG3-201ENST00000298537 MT1BP07438 61 aa10.88□□□□□ -0.67
SDCCAG3-201ENST00000298537 LCE2BO14633 110 aa10.76□□□□□ -0.69
SDCCAG3-201ENST00000298537 USH2AO75445 5202 aa10.76□□□□□ -0.69
SDCCAG3-201ENST00000298537 MT1XP80297 61 aa10.59□□□□□ -0.71
SDCCAG3-201ENST00000298537 KRTAP10-5P60370 271 aa10.58□□□□□ -0.72
SDCCAG3-201ENST00000298537 TNP1P09430 55 aa10.53□□□□□ -0.72
SDCCAG3-201ENST00000298537 FSIP2Q5CZC0 6907 aa10.3□□□□□ -0.76
SDCCAG3-201ENST00000298537 A0A0A0MQY5 61 aa10.28□□□□□ -0.76
SDCCAG3-201ENST00000298537 KRTAP10-7P60409 375 aaPredicted RBP10.26□□□□□ -0.77
SDCCAG3-201ENST00000298537 PP632Q6XCG6 107 aa10.24□□□□□ -0.77
SDCCAG3-201ENST00000298537 SSPOA2VEC9 5147 aa10.24□□□□□ -0.77
SDCCAG3-201ENST00000298537 LCE3AQ5TA76 89 aa10.22□□□□□ -0.77
SDCCAG3-201ENST00000298537 PRO2289Q9P1D8 64 aa10.19□□□□□ -0.78
SDCCAG3-201ENST00000298537 KMT2DO14686 5537 aa10.12□□□□□ -0.79
SDCCAG3-201ENST00000298537 KRTAP23-1A1A580 65 aa10.12□□□□□ -0.79
SDCCAG3-201ENST00000298537 LUZP6Q538Z0 58 aa10.08□□□□□ -0.8
SDCCAG3-201ENST00000298537 KRTAP10-12P60413 245 aa10.06□□□□□ -0.8
SDCCAG3-201ENST00000298537 KRTAP8-1Q8IUC2 63 aa9.88□□□□□ -0.83
SDCCAG3-201ENST00000298537 KRTAP4-8A0A0G2JLE6 195 aa9.87□□□□□ -0.83
SDCCAG3-201ENST00000298537 LCE2DQ5TA82 110 aaPredicted RBP9.87□□□□□ -0.83
SDCCAG3-201ENST00000298537 KRTAP4-8Q9BYQ9 185 aa9.87□□□□□ -0.83
SDCCAG3-201ENST00000298537 KRTAP19-6Q3LI70 58 aa9.85□□□□□ -0.83
SDCCAG3-201ENST00000298537 KRTAP12-3P60328 96 aa9.72□□□□□ -0.85
SDCCAG3-201ENST00000298537 FCGBPQ9Y6R7 5405 aaPredicted RBP9.7□□□□□ -0.86
SDCCAG3-201ENST00000298537 KRTAP19-5Q3LI72 72 aa9.66□□□□□ -0.86
SDCCAG3-201ENST00000298537 KRTAP9-2Q9BYQ4 174 aa9.51□□□□□ -0.89
SDCCAG3-201ENST00000298537 KRTAP19-7Q3SYF9 63 aa9.46□□□□□ -0.9
SDCCAG3-201ENST00000298537 SPRR5A0A1B0GTR4 108 aa9.36□□□□□ -0.91
SDCCAG3-201ENST00000298537 MACF1Q9UPN3 7388 aaKnown RBP9.29□□□□□ -0.92
SDCCAG3-201ENST00000298537 MT1EP04732 61 aa9.22□□□□□ -0.93
SDCCAG3-201ENST00000298537 MUC12Q9UKN1 5478 aa9.19□□□□□ -0.94
SDCCAG3-201ENST00000298537 CRCT1Q9UGL9 99 aa9.17□□□□□ -0.94
SDCCAG3-201ENST00000298537 SYNE2Q8WXH0 6885 aaKnown RBP9.1□□□□□ -0.95
SDCCAG3-201ENST00000298537 LCE3CQ5T5A8 94 aa9.09□□□□□ -0.95
SDCCAG3-201ENST00000298537 MT1LQ93083 61 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms