RNA–Protein interactions for RNA: ENST00000298231.5

PHOX2A-201, Transcript of paired like homeobox 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2A, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-201ENST00000298231 LCA10Q71F78 164 aa13.85□□□□□ -0.19
PHOX2A-201ENST00000298231 KRTAP3-1Q9BYR8 98 aa13.85□□□□□ -0.19
PHOX2A-201ENST00000298231 TPRXLQ17RH7 258 aa13.77□□□□□ -0.21
PHOX2A-201ENST00000298231 A8MU10 97 aa13.75□□□□□ -0.21
PHOX2A-201ENST00000298231 SEC61GP60059 68 aa13.72□□□□□ -0.21
PHOX2A-201ENST00000298231 UBR4Q5T4S7 5183 aa13.68□□□□□ -0.22
PHOX2A-201ENST00000298231 LRP2P98164 4655 aa13.67□□□□□ -0.22
PHOX2A-201ENST00000298231 UQCR11O14957 56 aa13.66□□□□□ -0.22
PHOX2A-201ENST00000298231 SPATA8Q6RVD6 105 aa13.61□□□□□ -0.23
PHOX2A-201ENST00000298231 LPAP08519 4548 aa13.6□□□□□ -0.23
PHOX2A-201ENST00000298231 PMAIP1Q13794 54 aa13.56□□□□□ -0.24
PHOX2A-201ENST00000298231 MIR22HGQ0VDD5 57 aa13.54□□□□□ -0.24
PHOX2A-201ENST00000298231 A6NN06 94 aa13.44□□□□□ -0.26
PHOX2A-201ENST00000298231 S4R3F8 94 aa13.4□□□□□ -0.26
PHOX2A-201ENST00000298231 H1FX-AS1Q4G0G2 97 aa13.34□□□□□ -0.27
PHOX2A-201ENST00000298231 KRTAP3-3Q9BYR6 98 aa13.34□□□□□ -0.27
PHOX2A-201ENST00000298231 A0A1B0GU33 70 aa13.32□□□□□ -0.28
PHOX2A-201ENST00000298231 RBM12B-AS1Q9P1G2 102 aa13.31□□□□□ -0.28
PHOX2A-201ENST00000298231 RNF213Q63HN8 5207 aa13.29□□□□□ -0.28
PHOX2A-201ENST00000298231 SEC61BP60468 96 aaKnown RBP13.28□□□□□ -0.28
PHOX2A-201ENST00000298231 KTN1-AS1Q86SY8 53 aa13.27□□□□□ -0.29
PHOX2A-201ENST00000298231 H0YAA0 97 aa13.21□□□□□ -0.29
PHOX2A-201ENST00000298231 MUC17Q685J3 4493 aa13.13□□□□□ -0.31
PHOX2A-201ENST00000298231 KRTAP10-6P60371 365 aaPredicted RBP13.08□□□□□ -0.31
PHOX2A-201ENST00000298231 KRTAP3-2Q9BYR7 98 aa13.04□□□□□ -0.32
PHOX2A-201ENST00000298231 CSAG1Q6PB30 78 aa13.02□□□□□ -0.33
PHOX2A-201ENST00000298231 MUC2Q02817 5179 aa13□□□□□ -0.33
PHOX2A-201ENST00000298231 K7ERS5 55 aa12.88□□□□□ -0.35
PHOX2A-201ENST00000298231 KRTAP4-1Q9BYQ7 146 aa12.85□□□□□ -0.35
PHOX2A-201ENST00000298231 ADM2Q7Z4H4 148 aa12.84□□□□□ -0.35
PHOX2A-201ENST00000298231 P0C880 135 aa12.83□□□□□ -0.35
PHOX2A-201ENST00000298231 KRTAP13-4Q3LI77 160 aa12.77□□□□□ -0.36
PHOX2A-201ENST00000298231 M0QZ58 72 aa12.68□□□□□ -0.38
PHOX2A-201ENST00000298231 KRTAP19-2Q3LHN2 52 aa12.64□□□□□ -0.39
PHOX2A-201ENST00000298231 FAT4Q6V0I7 4981 aa12.64□□□□□ -0.39
PHOX2A-201ENST00000298231 PRAC1Q96KF2 57 aa12.59□□□□□ -0.39
PHOX2A-201ENST00000298231 A0A0D9SG42 100 aa12.58□□□□□ -0.4
PHOX2A-201ENST00000298231 LCE2AQ5TA79 106 aaPredicted RBP12.54□□□□□ -0.4
PHOX2A-201ENST00000298231 LCE2CQ5TA81 110 aa12.46□□□□□ -0.41
PHOX2A-201ENST00000298231 ROMO1P60602 79 aa12.41□□□□□ -0.42
PHOX2A-201ENST00000298231 KRTAP12-1P59990 96 aa12.38□□□□□ -0.43
PHOX2A-201ENST00000298231 R4GN34 69 aa12.36□□□□□ -0.43
PHOX2A-201ENST00000298231 KRTAP12-2P59991 146 aa12.34□□□□□ -0.43
PHOX2A-201ENST00000298231 MT1HP80294 61 aa12.27□□□□□ -0.45
PHOX2A-201ENST00000298231 SPINT4Q6UDR6 99 aa12.26□□□□□ -0.45
PHOX2A-201ENST00000298231 KRTAP25-1Q3LHN0 102 aa12.24□□□□□ -0.45
PHOX2A-201ENST00000298231 KRTAP9-2Q9BYQ4 174 aa12.21□□□□□ -0.45
PHOX2A-201ENST00000298231 LINC01554Q52M75 96 aa12.16□□□□□ -0.46
PHOX2A-201ENST00000298231 FLGP20930 4061 aaPredicted RBP12.15□□□□□ -0.47
PHOX2A-201ENST00000298231 LORP23490 312 aaPredicted RBP12.12□□□□□ -0.47
PHOX2A-201ENST00000298231 CRIPTQ9P021 101 aa12.11□□□□□ -0.47
PHOX2A-201ENST00000298231 M0R2T5 61 aa12.03□□□□□ -0.48
PHOX2A-201ENST00000298231 KRTAP9-6A0A140TA67 174 aa11.85□□□□□ -0.51
PHOX2A-201ENST00000298231 LCE2DQ5TA82 110 aaPredicted RBP11.74□□□□□ -0.53
PHOX2A-201ENST00000298231 KRTAP9-8Q9BYQ0 159 aa11.68□□□□□ -0.54
PHOX2A-201ENST00000298231 C10orf95Q9H7T3 257 aa11.68□□□□□ -0.54
PHOX2A-201ENST00000298231 CAMK2N1Q7Z7J9 78 aa11.66□□□□□ -0.54
PHOX2A-201ENST00000298231 SPRR2GQ9BYE4 73 aa11.63□□□□□ -0.55
PHOX2A-201ENST00000298231 FSIP2Q5CZC0 6907 aa11.59□□□□□ -0.55
PHOX2A-201ENST00000298231 MT2AP02795 61 aa11.54□□□□□ -0.56
PHOX2A-201ENST00000298231 CRCT1Q9UGL9 99 aa11.49□□□□□ -0.57
PHOX2A-201ENST00000298231 KRTAP19-1Q8IUB9 90 aa11.48□□□□□ -0.57
PHOX2A-201ENST00000298231 MT1FP04733 61 aa11.46□□□□□ -0.58
PHOX2A-201ENST00000298231 KRTAP10-10P60014 251 aa11.4□□□□□ -0.59
PHOX2A-201ENST00000298231 PLAC4Q8WY50 150 aa11.37□□□□□ -0.59
PHOX2A-201ENST00000298231 PP632Q6XCG6 107 aa11.35□□□□□ -0.59
PHOX2A-201ENST00000298231 KRTAP9-3Q9BYQ3 159 aa11.3□□□□□ -0.6
PHOX2A-201ENST00000298231 TNP1P09430 55 aa11.24□□□□□ -0.61
PHOX2A-201ENST00000298231 KRTAP19-8Q3LI54 63 aa11.24□□□□□ -0.61
PHOX2A-201ENST00000298231 KRTAP23-1A1A580 65 aa11.19□□□□□ -0.62
PHOX2A-201ENST00000298231 LCE2BO14633 110 aa11.15□□□□□ -0.62
PHOX2A-201ENST00000298231 USH2AO75445 5202 aa11.06□□□□□ -0.64
PHOX2A-201ENST00000298231 KRTAP15-1Q3LI76 137 aa10.98□□□□□ -0.65
PHOX2A-201ENST00000298231 MT1BP07438 61 aa10.98□□□□□ -0.65
PHOX2A-201ENST00000298231 SSPOA2VEC9 5147 aa10.88□□□□□ -0.67
PHOX2A-201ENST00000298231 MT1XP80297 61 aa10.76□□□□□ -0.69
PHOX2A-201ENST00000298231 KRTAP10-5P60370 271 aa10.76□□□□□ -0.69
PHOX2A-201ENST00000298231 KRTAP19-6Q3LI70 58 aa10.72□□□□□ -0.69
PHOX2A-201ENST00000298231 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.71□□□□□ -0.69
PHOX2A-201ENST00000298231 PRO2289Q9P1D8 64 aa10.66□□□□□ -0.7
PHOX2A-201ENST00000298231 KRTAP9-7A8MTY7 169 aa10.65□□□□□ -0.7
PHOX2A-201ENST00000298231 FCGBPQ9Y6R7 5405 aaPredicted RBP10.62□□□□□ -0.71
PHOX2A-201ENST00000298231 LCE3AQ5TA76 89 aa10.58□□□□□ -0.72
PHOX2A-201ENST00000298231 KRTAP8-1Q8IUC2 63 aa10.47□□□□□ -0.73
PHOX2A-201ENST00000298231 KRTAP10-12P60413 245 aa10.47□□□□□ -0.73
PHOX2A-201ENST00000298231 NDUFAF8A1L188 74 aa10.38□□□□□ -0.75
PHOX2A-201ENST00000298231 KRTAP10-7P60409 375 aaPredicted RBP10.32□□□□□ -0.76
PHOX2A-201ENST00000298231 MACF1Q9UPN3 7388 aaKnown RBP10.3□□□□□ -0.76
PHOX2A-201ENST00000298231 SPRR5A0A1B0GTR4 108 aa10.28□□□□□ -0.76
PHOX2A-201ENST00000298231 SYNE2Q8WXH0 6885 aaKnown RBP10.26□□□□□ -0.77
PHOX2A-201ENST00000298231 LUZP6Q538Z0 58 aa10.24□□□□□ -0.77
PHOX2A-201ENST00000298231 KRTAP12-3P60328 96 aa10.18□□□□□ -0.78
PHOX2A-201ENST00000298231 H3BS24 57 aa10.16□□□□□ -0.78
PHOX2A-201ENST00000298231 KRTAP6-3Q3LI67 103 aa9.93□□□□□ -0.82
PHOX2A-201ENST00000298231 KRTAP19-5Q3LI72 72 aa9.85□□□□□ -0.83
PHOX2A-201ENST00000298231 KRTAP4-8A0A0G2JLE6 195 aa9.7□□□□□ -0.86
PHOX2A-201ENST00000298231 KRTAP4-8Q9BYQ9 185 aa9.7□□□□□ -0.86
PHOX2A-201ENST00000298231 MUC12Q9UKN1 5478 aa9.64□□□□□ -0.87
PHOX2A-201ENST00000298231 KRTAP5-9P26371 169 aa9.64□□□□□ -0.87
PHOX2A-201ENST00000298231 NEBP20929 6669 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms