RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 PRR15LQ9BU68 103 aa7.01□□□□□ -1.29
CHMP4C-201ENST00000297265 LOC100996750A0A140TA64 210 aa6.9□□□□□ -1.31
CHMP4C-201ENST00000297265 BRK1Q8WUW1 75 aa6.9□□□□□ -1.31
CHMP4C-201ENST00000297265 KRTAP4-6Q9BYQ5 205 aa6.9□□□□□ -1.31
CHMP4C-201ENST00000297265 A8MU10 97 aa6.88□□□□□ -1.31
CHMP4C-201ENST00000297265 A0A1B0GU69 56 aa6.85□□□□□ -1.31
CHMP4C-201ENST00000297265 MUC17Q685J3 4493 aa6.85□□□□□ -1.31
CHMP4C-201ENST00000297265 PRO0628Q9UI54 55 aa6.84□□□□□ -1.31
CHMP4C-201ENST00000297265 LCA10Q71F78 164 aa6.83□□□□□ -1.32
CHMP4C-201ENST00000297265 SPTSSBQ8NFR3 76 aa6.82□□□□□ -1.32
CHMP4C-201ENST00000297265 KRTAP4-1Q9BYQ7 146 aa6.82□□□□□ -1.32
CHMP4C-201ENST00000297265 A6NED7 52 aa6.81□□□□□ -1.32
CHMP4C-201ENST00000297265 LCE2CQ5TA81 110 aa6.81□□□□□ -1.32
CHMP4C-201ENST00000297265 SEC61BP60468 96 aaKnown RBP6.79□□□□□ -1.32
CHMP4C-201ENST00000297265 H1FX-AS1Q4G0G2 97 aa6.77□□□□□ -1.33
CHMP4C-201ENST00000297265 HMCN2Q8NDA2 5059 aa6.76□□□□□ -1.33
CHMP4C-201ENST00000297265 CDC42SE1Q9NRR8 79 aa6.75□□□□□ -1.33
CHMP4C-201ENST00000297265 S4R3F8 94 aa6.75□□□□□ -1.33
CHMP4C-201ENST00000297265 LCE2AQ5TA79 106 aaPredicted RBP6.74□□□□□ -1.33
CHMP4C-201ENST00000297265 SVIPQ8NHG7 77 aa6.73□□□□□ -1.33
CHMP4C-201ENST00000297265 RBM12B-AS1Q9P1G2 102 aa6.73□□□□□ -1.33
CHMP4C-201ENST00000297265 KRTAP9-6A0A140TA67 174 aa6.72□□□□□ -1.33
CHMP4C-201ENST00000297265 MUC2Q02817 5179 aa6.72□□□□□ -1.33
CHMP4C-201ENST00000297265 SEC61GP60059 68 aa6.7□□□□□ -1.34
CHMP4C-201ENST00000297265 KRTAP19-2Q3LHN2 52 aa6.7□□□□□ -1.34
CHMP4C-201ENST00000297265 UQCR11O14957 56 aa6.68□□□□□ -1.34
CHMP4C-201ENST00000297265 SPATA8Q6RVD6 105 aa6.68□□□□□ -1.34
CHMP4C-201ENST00000297265 KRTAP10-6P60371 365 aaPredicted RBP6.66□□□□□ -1.34
CHMP4C-201ENST00000297265 LORP23490 312 aaPredicted RBP6.66□□□□□ -1.34
CHMP4C-201ENST00000297265 MIR22HGQ0VDD5 57 aa6.63□□□□□ -1.35
CHMP4C-201ENST00000297265 A0A1B0GU33 70 aa6.61□□□□□ -1.35
CHMP4C-201ENST00000297265 H0YAA0 97 aa6.6□□□□□ -1.35
CHMP4C-201ENST00000297265 KRTAP9-2Q9BYQ4 174 aa6.6□□□□□ -1.35
CHMP4C-201ENST00000297265 CSAG1Q6PB30 78 aa6.57□□□□□ -1.36
CHMP4C-201ENST00000297265 P0C880 135 aa6.56□□□□□ -1.36
CHMP4C-201ENST00000297265 PMAIP1Q13794 54 aa6.53□□□□□ -1.36
CHMP4C-201ENST00000297265 KRTAP13-4Q3LI77 160 aa6.52□□□□□ -1.37
CHMP4C-201ENST00000297265 FLGP20930 4061 aaPredicted RBP6.51□□□□□ -1.37
CHMP4C-201ENST00000297265 A6NN06 94 aa6.51□□□□□ -1.37
CHMP4C-201ENST00000297265 ADM2Q7Z4H4 148 aa6.51□□□□□ -1.37
CHMP4C-201ENST00000297265 RNF213Q63HN8 5207 aa6.44□□□□□ -1.38
CHMP4C-201ENST00000297265 FAT4Q6V0I7 4981 aa6.38□□□□□ -1.39
CHMP4C-201ENST00000297265 A0A0D9SG42 100 aa6.32□□□□□ -1.4
CHMP4C-201ENST00000297265 M0QZ58 72 aa6.31□□□□□ -1.4
CHMP4C-201ENST00000297265 H3BS24 57 aa6.3□□□□□ -1.4
CHMP4C-201ENST00000297265 KTN1-AS1Q86SY8 53 aa6.3□□□□□ -1.4
CHMP4C-201ENST00000297265 KRTAP12-2P59991 146 aa6.25□□□□□ -1.41
CHMP4C-201ENST00000297265 KRTAP12-1P59990 96 aa6.24□□□□□ -1.41
CHMP4C-201ENST00000297265 MT1HP80294 61 aa6.24□□□□□ -1.41
CHMP4C-201ENST00000297265 R4GN34 69 aa6.22□□□□□ -1.41
CHMP4C-201ENST00000297265 K7ERS5 55 aa6.19□□□□□ -1.42
CHMP4C-201ENST00000297265 PRAC1Q96KF2 57 aa6.15□□□□□ -1.42
CHMP4C-201ENST00000297265 LINC01554Q52M75 96 aa6.14□□□□□ -1.43
CHMP4C-201ENST00000297265 SPINT4Q6UDR6 99 aa6.14□□□□□ -1.43
CHMP4C-201ENST00000297265 M0R2T5 61 aa6.09□□□□□ -1.43
CHMP4C-201ENST00000297265 CRCT1Q9UGL9 99 aa6.09□□□□□ -1.44
CHMP4C-201ENST00000297265 KRTAP9-8Q9BYQ0 159 aa6.08□□□□□ -1.44
CHMP4C-201ENST00000297265 CRIPTQ9P021 101 aa6.07□□□□□ -1.44
CHMP4C-201ENST00000297265 ROMO1P60602 79 aa6.06□□□□□ -1.44
CHMP4C-201ENST00000297265 MT2AP02795 61 aa6.03□□□□□ -1.44
CHMP4C-201ENST00000297265 MT1FP04733 61 aa6.02□□□□□ -1.44
CHMP4C-201ENST00000297265 KRTAP19-1Q8IUB9 90 aa6.01□□□□□ -1.45
CHMP4C-201ENST00000297265 SPRR2GQ9BYE4 73 aa6□□□□□ -1.45
CHMP4C-201ENST00000297265 KRTAP10-10P60014 251 aa5.94□□□□□ -1.46
CHMP4C-201ENST00000297265 KRTAP4-8Q9BYQ9 185 aa5.94□□□□□ -1.46
CHMP4C-201ENST00000297265 KRTAP9-7A8MTY7 169 aa5.92□□□□□ -1.46
CHMP4C-201ENST00000297265 KRTAP25-1Q3LHN0 102 aa5.92□□□□□ -1.46
CHMP4C-201ENST00000297265 C10orf95Q9H7T3 257 aa5.92□□□□□ -1.46
CHMP4C-201ENST00000297265 FSIP2Q5CZC0 6907 aa5.87□□□□□ -1.47
CHMP4C-201ENST00000297265 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
CHMP4C-201ENST00000297265 KRTAP9-3Q9BYQ3 159 aa5.84□□□□□ -1.47
CHMP4C-201ENST00000297265 CAMK2N1Q7Z7J9 78 aa5.82□□□□□ -1.48
CHMP4C-201ENST00000297265 KRTAP19-8Q3LI54 63 aa5.81□□□□□ -1.48
CHMP4C-201ENST00000297265 MT1BP07438 61 aa5.76□□□□□ -1.49
CHMP4C-201ENST00000297265 PLAC4Q8WY50 150 aa5.75□□□□□ -1.49
CHMP4C-201ENST00000297265 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.5
CHMP4C-201ENST00000297265 KRTAP10-5P60370 271 aa5.61□□□□□ -1.51
CHMP4C-201ENST00000297265 MT1XP80297 61 aa5.61□□□□□ -1.51
CHMP4C-201ENST00000297265 TNP1P09430 55 aa5.59□□□□□ -1.51
CHMP4C-201ENST00000297265 LCE3BQ5TA77 95 aa5.56□□□□□ -1.52
CHMP4C-201ENST00000297265 USH2AO75445 5202 aa5.55□□□□□ -1.52
CHMP4C-201ENST00000297265 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
CHMP4C-201ENST00000297265 KRTAP9-9Q9BYP9 154 aa5.52□□□□□ -1.53
CHMP4C-201ENST00000297265 KRTAP9-4Q9BYQ2 154 aa5.52□□□□□ -1.53
CHMP4C-201ENST00000297265 PP632Q6XCG6 107 aa5.51□□□□□ -1.53
CHMP4C-201ENST00000297265 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
CHMP4C-201ENST00000297265 SSPOA2VEC9 5147 aa5.44□□□□□ -1.54
CHMP4C-201ENST00000297265 KRTAP5-3Q6L8H2 238 aa5.43□□□□□ -1.54
CHMP4C-201ENST00000297265 KRTAP10-7P60409 375 aaPredicted RBP5.41□□□□□ -1.54
CHMP4C-201ENST00000297265 LCE3AQ5TA76 89 aa5.4□□□□□ -1.55
CHMP4C-201ENST00000297265 PRO2289Q9P1D8 64 aa5.38□□□□□ -1.55
CHMP4C-201ENST00000297265 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
CHMP4C-201ENST00000297265 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
CHMP4C-201ENST00000297265 KRTAP10-12P60413 245 aa5.3□□□□□ -1.56
CHMP4C-201ENST00000297265 KRTAP8-1Q8IUC2 63 aa5.3□□□□□ -1.56
CHMP4C-201ENST00000297265 KRTAP4-2Q9BYR5 136 aa5.3□□□□□ -1.56
CHMP4C-201ENST00000297265 KRTAP4-12Q9BQ66 201 aa5.28□□□□□ -1.56
CHMP4C-201ENST00000297265 KMT2DO14686 5537 aa5.24□□□□□ -1.57
CHMP4C-201ENST00000297265 SYNE2Q8WXH0 6885 aaKnown RBP5.22□□□□□ -1.57
CHMP4C-201ENST00000297265 LCE1DQ5T752 114 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms