RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 XP32Q5T750 250 aa7.05□□□□□ -1.28
NCSTN-201ENST00000294785 HSPG2P98160 4391 aa7.03□□□□□ -1.28
NCSTN-201ENST00000294785 LRP1Q07954 4544 aaKnown RBP7.03□□□□□ -1.28
NCSTN-201ENST00000294785 KRTAP3-3Q9BYR6 98 aa7.03□□□□□ -1.28
NCSTN-201ENST00000294785 RYR3Q15413 4870 aa7.02□□□□□ -1.29
NCSTN-201ENST00000294785 S4R3F8 94 aa6.99□□□□□ -1.29
NCSTN-201ENST00000294785 KRTAP10-6P60371 365 aaPredicted RBP6.98□□□□□ -1.29
NCSTN-201ENST00000294785 KRTAP25-1Q3LHN0 102 aa6.97□□□□□ -1.29
NCSTN-201ENST00000294785 KRTAP3-2Q9BYR7 98 aa6.93□□□□□ -1.3
NCSTN-201ENST00000294785 RYR1P21817 5038 aa6.9□□□□□ -1.3
NCSTN-201ENST00000294785 MT1HL1P0DM35 61 aa6.89□□□□□ -1.31
NCSTN-201ENST00000294785 DMBT1Q9UGM3 2413 aaPredicted RBP6.88□□□□□ -1.31
NCSTN-201ENST00000294785 KRTAP13-4Q3LI77 160 aa6.88□□□□□ -1.31
NCSTN-201ENST00000294785 ROMO1P60602 79 aa6.87□□□□□ -1.31
NCSTN-201ENST00000294785 TPRXLQ17RH7 258 aa6.83□□□□□ -1.32
NCSTN-201ENST00000294785 MYCBP2O75592 4640 aa6.83□□□□□ -1.32
NCSTN-201ENST00000294785 KRTAP17-1Q9BYP8 105 aa6.83□□□□□ -1.32
NCSTN-201ENST00000294785 P0C880 135 aa6.81□□□□□ -1.32
NCSTN-201ENST00000294785 A0A0D9SG42 100 aa6.8□□□□□ -1.32
NCSTN-201ENST00000294785 KIAA1109Q2LD37 5005 aa6.8□□□□□ -1.32
NCSTN-201ENST00000294785 EPPK1P58107 5090 aaKnown RBP6.8□□□□□ -1.32
NCSTN-201ENST00000294785 CRIPTQ9P021 101 aa6.72□□□□□ -1.33
NCSTN-201ENST00000294785 M0QZ58 72 aa6.7□□□□□ -1.34
NCSTN-201ENST00000294785 KRTAP12-2P59991 146 aa6.67□□□□□ -1.34
NCSTN-201ENST00000294785 LPAP08519 4548 aa6.66□□□□□ -1.34
NCSTN-201ENST00000294785 KRTAP12-1P59990 96 aa6.65□□□□□ -1.34
NCSTN-201ENST00000294785 LRP2P98164 4655 aa6.65□□□□□ -1.35
NCSTN-201ENST00000294785 SPINT4Q6UDR6 99 aa6.6□□□□□ -1.35
NCSTN-201ENST00000294785 KRTAP4-5Q9BYR2 181 aa6.58□□□□□ -1.36
NCSTN-201ENST00000294785 SEC61BP60468 96 aaKnown RBP6.56□□□□□ -1.36
NCSTN-201ENST00000294785 C10orf95Q9H7T3 257 aa6.52□□□□□ -1.37
NCSTN-201ENST00000294785 ABCA13Q86UQ4 5058 aa6.5□□□□□ -1.37
NCSTN-201ENST00000294785 R4GN34 69 aa6.49□□□□□ -1.37
NCSTN-201ENST00000294785 MUC17Q685J3 4493 aa6.46□□□□□ -1.38
NCSTN-201ENST00000294785 H3BS24 57 aa6.45□□□□□ -1.38
NCSTN-201ENST00000294785 HERC2O95714 4834 aa6.38□□□□□ -1.39
NCSTN-201ENST00000294785 BIRC6Q9NR09 4857 aa6.37□□□□□ -1.39
NCSTN-201ENST00000294785 J3QL48 77 aa6.37□□□□□ -1.39
NCSTN-201ENST00000294785 KRTAP4-1Q9BYQ7 146 aa6.37□□□□□ -1.39
NCSTN-201ENST00000294785 KRTAP15-1Q3LI76 137 aa6.34□□□□□ -1.39
NCSTN-201ENST00000294785 KRTAP19-2Q3LHN2 52 aa6.32□□□□□ -1.4
NCSTN-201ENST00000294785 LORP23490 312 aaPredicted RBP6.32□□□□□ -1.4
NCSTN-201ENST00000294785 PCLOQ9Y6V0 5065 aa6.22□□□□□ -1.41
NCSTN-201ENST00000294785 FLGP20930 4061 aaPredicted RBP6.16□□□□□ -1.42
NCSTN-201ENST00000294785 HERC1Q15751 4861 aa6.15□□□□□ -1.43
NCSTN-201ENST00000294785 PP632Q6XCG6 107 aa6.14□□□□□ -1.43
NCSTN-201ENST00000294785 CAMK2N1Q7Z7J9 78 aa6.14□□□□□ -1.43
NCSTN-201ENST00000294785 NDUFAF8A1L188 74 aa6.14□□□□□ -1.43
NCSTN-201ENST00000294785 PLAC4Q8WY50 150 aa6.07□□□□□ -1.44
NCSTN-201ENST00000294785 MUC2Q02817 5179 aa6.01□□□□□ -1.45
NCSTN-201ENST00000294785 KRTAP23-1A1A580 65 aa5.97□□□□□ -1.45
NCSTN-201ENST00000294785 TNP1P09430 55 aa5.95□□□□□ -1.46
NCSTN-201ENST00000294785 HMCN2Q8NDA2 5059 aa5.92□□□□□ -1.46
NCSTN-201ENST00000294785 LCE2CQ5TA81 110 aa5.91□□□□□ -1.46
NCSTN-201ENST00000294785 SPRR2GQ9BYE4 73 aa5.89□□□□□ -1.47
NCSTN-201ENST00000294785 RNF213Q63HN8 5207 aa5.82□□□□□ -1.48
NCSTN-201ENST00000294785 LUZP6Q538Z0 58 aa5.82□□□□□ -1.48
NCSTN-201ENST00000294785 UBR4Q5T4S7 5183 aa5.82□□□□□ -1.48
NCSTN-201ENST00000294785 KRTAP19-1Q8IUB9 90 aa5.8□□□□□ -1.48
NCSTN-201ENST00000294785 M0R2T5 61 aa5.77□□□□□ -1.49
NCSTN-201ENST00000294785 MT1HP80294 61 aa5.76□□□□□ -1.49
NCSTN-201ENST00000294785 FAT4Q6V0I7 4981 aa5.72□□□□□ -1.49
NCSTN-201ENST00000294785 SPRR5A0A1B0GTR4 108 aa5.7□□□□□ -1.5
NCSTN-201ENST00000294785 MT2AP02795 61 aa5.68□□□□□ -1.5
NCSTN-201ENST00000294785 MT1FP04733 61 aa5.66□□□□□ -1.5
NCSTN-201ENST00000294785 KRTAP10-10P60014 251 aa5.66□□□□□ -1.5
NCSTN-201ENST00000294785 KRTAP9-8Q9BYQ0 159 aa5.64□□□□□ -1.51
NCSTN-201ENST00000294785 KRTAP19-8Q3LI54 63 aa5.62□□□□□ -1.51
NCSTN-201ENST00000294785 LCE3AQ5TA76 89 aa5.58□□□□□ -1.52
NCSTN-201ENST00000294785 A0A0A0MQY5 61 aa5.54□□□□□ -1.52
NCSTN-201ENST00000294785 KRTAP8-1Q8IUC2 63 aa5.51□□□□□ -1.53
NCSTN-201ENST00000294785 MT1BP07438 61 aa5.5□□□□□ -1.53
NCSTN-201ENST00000294785 KRTAP10-5P60370 271 aa5.48□□□□□ -1.53
NCSTN-201ENST00000294785 MT1XP80297 61 aa5.47□□□□□ -1.53
NCSTN-201ENST00000294785 KRTAP9-3Q9BYQ3 159 aa5.4□□□□□ -1.54
NCSTN-201ENST00000294785 KRTAP10-12P60413 245 aa5.39□□□□□ -1.55
NCSTN-201ENST00000294785 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
NCSTN-201ENST00000294785 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.55
NCSTN-201ENST00000294785 KRTAP10-7P60409 375 aaPredicted RBP5.28□□□□□ -1.56
NCSTN-201ENST00000294785 LCE2BO14633 110 aa5.15□□□□□ -1.59
NCSTN-201ENST00000294785 LCE2AQ5TA79 106 aaPredicted RBP5.11□□□□□ -1.59
NCSTN-201ENST00000294785 KRTAP19-5Q3LI72 72 aa5.08□□□□□ -1.6
NCSTN-201ENST00000294785 INE1O15225 51 aa5.07□□□□□ -1.6
NCSTN-201ENST00000294785 LCE3CQ5T5A8 94 aa5.04□□□□□ -1.6
NCSTN-201ENST00000294785 USH2AO75445 5202 aa5.03□□□□□ -1.6
NCSTN-201ENST00000294785 FSIP2Q5CZC0 6907 aa5□□□□□ -1.61
NCSTN-201ENST00000294785 KRTAP19-4Q3LI73 84 aa4.92□□□□□ -1.62
NCSTN-201ENST00000294785 KRTAP4-8A0A0G2JLE6 195 aa4.91□□□□□ -1.62
NCSTN-201ENST00000294785 KRTAP4-8Q9BYQ9 185 aa4.91□□□□□ -1.62
NCSTN-201ENST00000294785 KRTAP19-7Q3SYF9 63 aa4.87□□□□□ -1.63
NCSTN-201ENST00000294785 KMT2DO14686 5537 aa4.86□□□□□ -1.63
NCSTN-201ENST00000294785 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
NCSTN-201ENST00000294785 MT1EP04732 61 aa4.74□□□□□ -1.65
NCSTN-201ENST00000294785 MT1LQ93083 61 aa4.74□□□□□ -1.65
NCSTN-201ENST00000294785 SSPOA2VEC9 5147 aa4.71□□□□□ -1.65
NCSTN-201ENST00000294785 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.66
NCSTN-201ENST00000294785 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.66
NCSTN-201ENST00000294785 KRTAP2-1Q9BYU5 128 aa4.71□□□□□ -1.66
NCSTN-201ENST00000294785 KRTAP4-7Q9BYR0 210 aa4.69□□□□□ -1.66
NCSTN-201ENST00000294785 KRTAP19-6Q3LI70 58 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms