RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 XP32Q5T750 250 aa10.48□□□□□ -0.73
CXCL16-201ENST00000293778 DMBT1Q9UGM3 2413 aaPredicted RBP10.47□□□□□ -0.73
CXCL16-201ENST00000293778 MIR22HGQ0VDD5 57 aa10.47□□□□□ -0.73
CXCL16-201ENST00000293778 KIAA1109Q2LD37 5005 aa10.46□□□□□ -0.74
CXCL16-201ENST00000293778 ADM2Q7Z4H4 148 aa10.41□□□□□ -0.74
CXCL16-201ENST00000293778 H3BS24 57 aa10.38□□□□□ -0.75
CXCL16-201ENST00000293778 MYCBP2O75592 4640 aa10.35□□□□□ -0.75
CXCL16-201ENST00000293778 BIRC6Q9NR09 4857 aa10.24□□□□□ -0.77
CXCL16-201ENST00000293778 A0A1B0GU33 70 aa10.23□□□□□ -0.77
CXCL16-201ENST00000293778 H1FX-AS1Q4G0G2 97 aa10.21□□□□□ -0.77
CXCL16-201ENST00000293778 H0YAA0 97 aa10.21□□□□□ -0.78
CXCL16-201ENST00000293778 TPRXLQ17RH7 258 aa10.2□□□□□ -0.78
CXCL16-201ENST00000293778 KRTAP3-3Q9BYR6 98 aa10.17□□□□□ -0.78
CXCL16-201ENST00000293778 CSAG1Q6PB30 78 aa10.15□□□□□ -0.78
CXCL16-201ENST00000293778 KRTAP4-5Q9BYR2 181 aa10.15□□□□□ -0.78
CXCL16-201ENST00000293778 S4R3F8 94 aa10.14□□□□□ -0.79
CXCL16-201ENST00000293778 KRTAP10-6P60371 365 aaPredicted RBP10.01□□□□□ -0.81
CXCL16-201ENST00000293778 HERC2O95714 4834 aa10.01□□□□□ -0.81
CXCL16-201ENST00000293778 LRP2P98164 4655 aa10□□□□□ -0.81
CXCL16-201ENST00000293778 KRTAP3-2Q9BYR7 98 aa9.97□□□□□ -0.81
CXCL16-201ENST00000293778 ABCA13Q86UQ4 5058 aa9.96□□□□□ -0.81
CXCL16-201ENST00000293778 LPAP08519 4548 aa9.95□□□□□ -0.82
CXCL16-201ENST00000293778 J3QL48 77 aa9.87□□□□□ -0.83
CXCL16-201ENST00000293778 KRTAP13-4Q3LI77 160 aa9.86□□□□□ -0.83
CXCL16-201ENST00000293778 K7ERS5 55 aa9.85□□□□□ -0.83
CXCL16-201ENST00000293778 P0C880 135 aa9.85□□□□□ -0.83
CXCL16-201ENST00000293778 SEC61BP60468 96 aaKnown RBP9.83□□□□□ -0.84
CXCL16-201ENST00000293778 KRTAP25-1Q3LHN0 102 aa9.83□□□□□ -0.84
CXCL16-201ENST00000293778 ROMO1P60602 79 aa9.81□□□□□ -0.84
CXCL16-201ENST00000293778 PCLOQ9Y6V0 5065 aa9.79□□□□□ -0.84
CXCL16-201ENST00000293778 A0A0D9SG42 100 aa9.76□□□□□ -0.85
CXCL16-201ENST00000293778 KRTAP4-1Q9BYQ7 146 aa9.66□□□□□ -0.86
CXCL16-201ENST00000293778 MUC17Q685J3 4493 aa9.62□□□□□ -0.87
CXCL16-201ENST00000293778 M0QZ58 72 aa9.58□□□□□ -0.88
CXCL16-201ENST00000293778 KRTAP12-2P59991 146 aa9.52□□□□□ -0.88
CXCL16-201ENST00000293778 KRTAP12-1P59990 96 aa9.48□□□□□ -0.89
CXCL16-201ENST00000293778 SPINT4Q6UDR6 99 aa9.47□□□□□ -0.89
CXCL16-201ENST00000293778 KRTAP19-2Q3LHN2 52 aa9.46□□□□□ -0.89
CXCL16-201ENST00000293778 CRIPTQ9P021 101 aa9.45□□□□□ -0.9
CXCL16-201ENST00000293778 HERC1Q15751 4861 aa9.4□□□□□ -0.9
CXCL16-201ENST00000293778 R4GN34 69 aa9.39□□□□□ -0.91
CXCL16-201ENST00000293778 LORP23490 312 aaPredicted RBP9.3□□□□□ -0.92
CXCL16-201ENST00000293778 MUC2Q02817 5179 aa9.21□□□□□ -0.94
CXCL16-201ENST00000293778 HMCN2Q8NDA2 5059 aa9.19□□□□□ -0.94
CXCL16-201ENST00000293778 C10orf95Q9H7T3 257 aa9.17□□□□□ -0.94
CXCL16-201ENST00000293778 FLGP20930 4061 aaPredicted RBP9.15□□□□□ -0.95
CXCL16-201ENST00000293778 NDUFAF8A1L188 74 aa9.11□□□□□ -0.95
CXCL16-201ENST00000293778 KRTAP15-1Q3LI76 137 aa9.11□□□□□ -0.95
CXCL16-201ENST00000293778 LCE2CQ5TA81 110 aa9□□□□□ -0.97
CXCL16-201ENST00000293778 CAMK2N1Q7Z7J9 78 aa8.89□□□□□ -0.99
CXCL16-201ENST00000293778 UBR4Q5T4S7 5183 aa8.89□□□□□ -0.99
CXCL16-201ENST00000293778 M0R2T5 61 aa8.8□□□□□ -1
CXCL16-201ENST00000293778 FAT4Q6V0I7 4981 aa8.79□□□□□ -1
CXCL16-201ENST00000293778 RNF213Q63HN8 5207 aa8.78□□□□□ -1
CXCL16-201ENST00000293778 MT1HP80294 61 aa8.78□□□□□ -1
CXCL16-201ENST00000293778 A0A0A0MQY5 61 aa8.75□□□□□ -1.01
CXCL16-201ENST00000293778 SPRR2GQ9BYE4 73 aa8.69□□□□□ -1.02
CXCL16-201ENST00000293778 KRTAP19-1Q8IUB9 90 aa8.64□□□□□ -1.03
CXCL16-201ENST00000293778 MT2AP02795 61 aa8.58□□□□□ -1.04
CXCL16-201ENST00000293778 PP632Q6XCG6 107 aa8.58□□□□□ -1.04
CXCL16-201ENST00000293778 MT1FP04733 61 aa8.57□□□□□ -1.04
CXCL16-201ENST00000293778 PLAC4Q8WY50 150 aa8.57□□□□□ -1.04
CXCL16-201ENST00000293778 KRTAP10-10P60014 251 aa8.56□□□□□ -1.04
CXCL16-201ENST00000293778 LUZP6Q538Z0 58 aa8.54□□□□□ -1.04
CXCL16-201ENST00000293778 KRTAP9-8Q9BYQ0 159 aa8.54□□□□□ -1.04
CXCL16-201ENST00000293778 TNP1P09430 55 aa8.53□□□□□ -1.04
CXCL16-201ENST00000293778 KRTAP23-1A1A580 65 aa8.37□□□□□ -1.07
CXCL16-201ENST00000293778 KRTAP19-8Q3LI54 63 aa8.34□□□□□ -1.07
CXCL16-201ENST00000293778 MT1BP07438 61 aa8.23□□□□□ -1.09
CXCL16-201ENST00000293778 KRTAP9-3Q9BYQ3 159 aa8.19□□□□□ -1.1
CXCL16-201ENST00000293778 KRTAP10-5P60370 271 aa8.11□□□□□ -1.11
CXCL16-201ENST00000293778 MT1XP80297 61 aa8.11□□□□□ -1.11
CXCL16-201ENST00000293778 LCE3AQ5TA76 89 aa8.1□□□□□ -1.11
CXCL16-201ENST00000293778 LCE2AQ5TA79 106 aaPredicted RBP8.02□□□□□ -1.13
CXCL16-201ENST00000293778 KRTAP8-1Q8IUC2 63 aa7.91□□□□□ -1.14
CXCL16-201ENST00000293778 SPRR5A0A1B0GTR4 108 aa7.9□□□□□ -1.15
CXCL16-201ENST00000293778 LCE2BO14633 110 aa7.9□□□□□ -1.15
CXCL16-201ENST00000293778 PRO2289Q9P1D8 64 aa7.9□□□□□ -1.15
CXCL16-201ENST00000293778 KRTAP10-12P60413 245 aa7.88□□□□□ -1.15
CXCL16-201ENST00000293778 KRTAP10-7P60409 375 aaPredicted RBP7.84□□□□□ -1.15
CXCL16-201ENST00000293778 KRTAP12-3P60328 96 aa7.74□□□□□ -1.17
CXCL16-201ENST00000293778 USH2AO75445 5202 aa7.6□□□□□ -1.19
CXCL16-201ENST00000293778 KRTAP19-5Q3LI72 72 aa7.49□□□□□ -1.21
CXCL16-201ENST00000293778 KRTAP4-8A0A0G2JLE6 195 aa7.41□□□□□ -1.22
CXCL16-201ENST00000293778 KRTAP4-8Q9BYQ9 185 aa7.41□□□□□ -1.22
CXCL16-201ENST00000293778 FSIP2Q5CZC0 6907 aa7.41□□□□□ -1.22
CXCL16-201ENST00000293778 KRTAP9-2Q9BYQ4 174 aa7.4□□□□□ -1.22
CXCL16-201ENST00000293778 LCE2DQ5TA82 110 aaPredicted RBP7.39□□□□□ -1.23
CXCL16-201ENST00000293778 INE1O15225 51 aa7.37□□□□□ -1.23
CXCL16-201ENST00000293778 KMT2DO14686 5537 aa7.34□□□□□ -1.23
CXCL16-201ENST00000293778 LCE3CQ5T5A8 94 aa7.27□□□□□ -1.25
CXCL16-201ENST00000293778 SSPOA2VEC9 5147 aa7.26□□□□□ -1.25
CXCL16-201ENST00000293778 KRTAP19-7Q3SYF9 63 aa7.23□□□□□ -1.25
CXCL16-201ENST00000293778 KRTAP19-6Q3LI70 58 aa7.2□□□□□ -1.26
CXCL16-201ENST00000293778 CRCT1Q9UGL9 99 aa7.05□□□□□ -1.28
CXCL16-201ENST00000293778 MT1EP04732 61 aa7.05□□□□□ -1.28
CXCL16-201ENST00000293778 KRTAP19-4Q3LI73 84 aa7□□□□□ -1.29
CXCL16-201ENST00000293778 MT1LQ93083 61 aa7□□□□□ -1.29
CXCL16-201ENST00000293778 KRTAP9-6A0A140TA67 174 aa6.97□□□□□ -1.29
CXCL16-201ENST00000293778 KRTAP4-7Q9BYR0 210 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms