RNA–Protein interactions for RNA: ENST00000291722.11

CACFD1-201, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2 BASIC

Gene CACFD1, Length 2,688 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-201ENST00000291722 Q5VSD8 79 aa8.71□□□□□ -1.02
CACFD1-201ENST00000291722 MYCBP2O75592 4640 aa8.69□□□□□ -1.02
CACFD1-201ENST00000291722 DMBT1Q9UGM3 2413 aaPredicted RBP8.68□□□□□ -1.02
CACFD1-201ENST00000291722 KIAA1109Q2LD37 5005 aa8.68□□□□□ -1.02
CACFD1-201ENST00000291722 H0YAA0 97 aa8.68□□□□□ -1.02
CACFD1-201ENST00000291722 KRTAP3-1Q9BYR8 98 aa8.67□□□□□ -1.02
CACFD1-201ENST00000291722 CRIPTQ9P021 101 aa8.67□□□□□ -1.02
CACFD1-201ENST00000291722 KRTAP10-8P60410 259 aa8.66□□□□□ -1.02
CACFD1-201ENST00000291722 EPPK1P58107 5090 aaKnown RBP8.56□□□□□ -1.04
CACFD1-201ENST00000291722 A0A0A0MQY5 61 aa8.48□□□□□ -1.05
CACFD1-201ENST00000291722 NDUFAF8A1L188 74 aa8.47□□□□□ -1.05
CACFD1-201ENST00000291722 MT1HL1P0DM35 61 aa8.47□□□□□ -1.05
CACFD1-201ENST00000291722 XP32Q5T750 250 aa8.47□□□□□ -1.05
CACFD1-201ENST00000291722 A0A1B0GU33 70 aa8.46□□□□□ -1.06
CACFD1-201ENST00000291722 COX6B2Q6YFQ2 88 aa8.46□□□□□ -1.06
CACFD1-201ENST00000291722 SPINT4Q6UDR6 99 aa8.46□□□□□ -1.06
CACFD1-201ENST00000291722 RPL37P61927 97 aaKnown RBP8.44□□□□□ -1.06
CACFD1-201ENST00000291722 LPAP08519 4548 aa8.41□□□□□ -1.06
CACFD1-201ENST00000291722 H1FX-AS1Q4G0G2 97 aa8.39□□□□□ -1.07
CACFD1-201ENST00000291722 LRP2P98164 4655 aa8.36□□□□□ -1.07
CACFD1-201ENST00000291722 K7ERS5 55 aa8.36□□□□□ -1.07
CACFD1-201ENST00000291722 ABCA13Q86UQ4 5058 aa8.34□□□□□ -1.07
CACFD1-201ENST00000291722 KRTAP15-1Q3LI76 137 aa8.32□□□□□ -1.08
CACFD1-201ENST00000291722 KRTAP4-5Q9BYR2 181 aa8.31□□□□□ -1.08
CACFD1-201ENST00000291722 TPRXLQ17RH7 258 aa8.3□□□□□ -1.08
CACFD1-201ENST00000291722 KRTAP3-3Q9BYR6 98 aa8.3□□□□□ -1.08
CACFD1-201ENST00000291722 C10orf95Q9H7T3 257 aa8.2□□□□□ -1.1
CACFD1-201ENST00000291722 S4R3F8 94 aa8.18□□□□□ -1.1
CACFD1-201ENST00000291722 KRTAP10-6P60371 365 aaPredicted RBP8.17□□□□□ -1.1
CACFD1-201ENST00000291722 KRTAP3-2Q9BYR7 98 aa8.13□□□□□ -1.11
CACFD1-201ENST00000291722 KRTAP13-4Q3LI77 160 aa8.11□□□□□ -1.11
CACFD1-201ENST00000291722 HERC2O95714 4834 aa8.03□□□□□ -1.12
CACFD1-201ENST00000291722 A0A0D9SG42 100 aa8.03□□□□□ -1.12
CACFD1-201ENST00000291722 LUZP6Q538Z0 58 aa7.99□□□□□ -1.13
CACFD1-201ENST00000291722 MUC17Q685J3 4493 aa7.97□□□□□ -1.13
CACFD1-201ENST00000291722 KRTAP4-1Q9BYQ7 146 aa7.91□□□□□ -1.14
CACFD1-201ENST00000291722 J3QL48 77 aa7.9□□□□□ -1.15
CACFD1-201ENST00000291722 BIRC6Q9NR09 4857 aa7.84□□□□□ -1.15
CACFD1-201ENST00000291722 SEC61BP60468 96 aaKnown RBP7.81□□□□□ -1.16
CACFD1-201ENST00000291722 KRTAP12-2P59991 146 aa7.8□□□□□ -1.16
CACFD1-201ENST00000291722 MUC2Q02817 5179 aa7.78□□□□□ -1.16
CACFD1-201ENST00000291722 KRTAP12-1P59990 96 aa7.73□□□□□ -1.17
CACFD1-201ENST00000291722 HERC1Q15751 4861 aa7.7□□□□□ -1.18
CACFD1-201ENST00000291722 KRTAP19-2Q3LHN2 52 aa7.69□□□□□ -1.18
CACFD1-201ENST00000291722 LORP23490 312 aaPredicted RBP7.68□□□□□ -1.18
CACFD1-201ENST00000291722 PCLOQ9Y6V0 5065 aa7.67□□□□□ -1.18
CACFD1-201ENST00000291722 M0QZ58 72 aa7.65□□□□□ -1.18
CACFD1-201ENST00000291722 R4GN34 69 aa7.58□□□□□ -1.2
CACFD1-201ENST00000291722 PLAC4Q8WY50 150 aa7.57□□□□□ -1.2
CACFD1-201ENST00000291722 HMCN2Q8NDA2 5059 aa7.57□□□□□ -1.2
CACFD1-201ENST00000291722 FLGP20930 4061 aaPredicted RBP7.53□□□□□ -1.2
CACFD1-201ENST00000291722 FAT4Q6V0I7 4981 aa7.43□□□□□ -1.22
CACFD1-201ENST00000291722 RNF213Q63HN8 5207 aa7.32□□□□□ -1.24
CACFD1-201ENST00000291722 LCE2CQ5TA81 110 aa7.3□□□□□ -1.24
CACFD1-201ENST00000291722 UBR4Q5T4S7 5183 aa7.29□□□□□ -1.24
CACFD1-201ENST00000291722 CAMK2N1Q7Z7J9 78 aa7.18□□□□□ -1.26
CACFD1-201ENST00000291722 MT1HP80294 61 aa7.1□□□□□ -1.27
CACFD1-201ENST00000291722 M0R2T5 61 aa7.09□□□□□ -1.27
CACFD1-201ENST00000291722 PP632Q6XCG6 107 aa7.04□□□□□ -1.28
CACFD1-201ENST00000291722 KRTAP19-1Q8IUB9 90 aa7.02□□□□□ -1.29
CACFD1-201ENST00000291722 MT1FP04733 61 aa6.97□□□□□ -1.29
CACFD1-201ENST00000291722 SPRR2GQ9BYE4 73 aa6.97□□□□□ -1.29
CACFD1-201ENST00000291722 MT2AP02795 61 aa6.95□□□□□ -1.3
CACFD1-201ENST00000291722 PRO2289Q9P1D8 64 aa6.95□□□□□ -1.3
CACFD1-201ENST00000291722 KRTAP10-10P60014 251 aa6.92□□□□□ -1.3
CACFD1-201ENST00000291722 KRTAP9-8Q9BYQ0 159 aa6.92□□□□□ -1.3
CACFD1-201ENST00000291722 SPRR5A0A1B0GTR4 108 aa6.9□□□□□ -1.3
CACFD1-201ENST00000291722 TNP1P09430 55 aa6.85□□□□□ -1.31
CACFD1-201ENST00000291722 KRTAP19-8Q3LI54 63 aa6.69□□□□□ -1.34
CACFD1-201ENST00000291722 MT1BP07438 61 aa6.68□□□□□ -1.34
CACFD1-201ENST00000291722 INE1O15225 51 aa6.65□□□□□ -1.34
CACFD1-201ENST00000291722 KRTAP23-1A1A580 65 aa6.62□□□□□ -1.35
CACFD1-201ENST00000291722 LCE3AQ5TA76 89 aa6.62□□□□□ -1.35
CACFD1-201ENST00000291722 KRTAP9-3Q9BYQ3 159 aa6.62□□□□□ -1.35
CACFD1-201ENST00000291722 KRTAP10-5P60370 271 aa6.6□□□□□ -1.35
CACFD1-201ENST00000291722 MT1XP80297 61 aa6.59□□□□□ -1.35
CACFD1-201ENST00000291722 USH2AO75445 5202 aa6.47□□□□□ -1.37
CACFD1-201ENST00000291722 KRTAP10-7P60409 375 aaPredicted RBP6.43□□□□□ -1.38
CACFD1-201ENST00000291722 LCE2BO14633 110 aa6.43□□□□□ -1.38
CACFD1-201ENST00000291722 LCE2AQ5TA79 106 aaPredicted RBP6.38□□□□□ -1.39
CACFD1-201ENST00000291722 KRTAP10-12P60413 245 aa6.36□□□□□ -1.39
CACFD1-201ENST00000291722 KRTAP8-1Q8IUC2 63 aa6.36□□□□□ -1.39
CACFD1-201ENST00000291722 KMT2DO14686 5537 aa6.29□□□□□ -1.4
CACFD1-201ENST00000291722 KRTAP12-3P60328 96 aa6.26□□□□□ -1.41
CACFD1-201ENST00000291722 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
CACFD1-201ENST00000291722 KRTAP4-8Q9BYQ9 185 aa6.12□□□□□ -1.43
CACFD1-201ENST00000291722 KRTAP19-5Q3LI72 72 aa6.11□□□□□ -1.43
CACFD1-201ENST00000291722 SSPOA2VEC9 5147 aa6.01□□□□□ -1.45
CACFD1-201ENST00000291722 FSIP2Q5CZC0 6907 aa5.95□□□□□ -1.46
CACFD1-201ENST00000291722 KRTAP19-7Q3SYF9 63 aa5.88□□□□□ -1.47
CACFD1-201ENST00000291722 LCE3CQ5T5A8 94 aa5.88□□□□□ -1.47
CACFD1-201ENST00000291722 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
CACFD1-201ENST00000291722 KRTAP9-6A8MVA2 160 aa5.75□□□□□ -1.49
CACFD1-201ENST00000291722 KRTAP19-6Q3LI70 58 aa5.73□□□□□ -1.49
CACFD1-201ENST00000291722 MT1EP04732 61 aa5.7□□□□□ -1.5
CACFD1-201ENST00000291722 MT1LQ93083 61 aa5.68□□□□□ -1.5
CACFD1-201ENST00000291722 FCGBPQ9Y6R7 5405 aaPredicted RBP5.64□□□□□ -1.51
CACFD1-201ENST00000291722 MUC12Q9UKN1 5478 aa5.58□□□□□ -1.52
CACFD1-201ENST00000291722 LCE2DQ5TA82 110 aaPredicted RBP5.51□□□□□ -1.53
CACFD1-201ENST00000291722 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms