RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 KRTAP4-5Q9BYR2 181 aa10.05□□□□□ -0.8
SHF-201ENST00000290894 XP32Q5T750 250 aa10.05□□□□□ -0.8
SHF-201ENST00000290894 ADM2Q7Z4H4 148 aa10.01□□□□□ -0.81
SHF-201ENST00000290894 ABCA13Q86UQ4 5058 aa10□□□□□ -0.81
SHF-201ENST00000290894 RPL37P61927 97 aaKnown RBP9.99□□□□□ -0.81
SHF-201ENST00000290894 LPAP08519 4548 aa9.97□□□□□ -0.81
SHF-201ENST00000290894 LRP2P98164 4655 aa9.96□□□□□ -0.81
SHF-201ENST00000290894 UQCR11O14957 56 aa9.92□□□□□ -0.82
SHF-201ENST00000290894 COX6B2Q6YFQ2 88 aa9.91□□□□□ -0.82
SHF-201ENST00000290894 SPATA8Q6RVD6 105 aa9.91□□□□□ -0.82
SHF-201ENST00000290894 MIR22HGQ0VDD5 57 aa9.89□□□□□ -0.83
SHF-201ENST00000290894 CSAG1Q6PB30 78 aa9.81□□□□□ -0.84
SHF-201ENST00000290894 A0A0A0MQY5 61 aa9.78□□□□□ -0.84
SHF-201ENST00000290894 HERC2O95714 4834 aa9.75□□□□□ -0.85
SHF-201ENST00000290894 TPRXLQ17RH7 258 aa9.74□□□□□ -0.85
SHF-201ENST00000290894 ROMO1P60602 79 aa9.73□□□□□ -0.85
SHF-201ENST00000290894 KRTAP3-3Q9BYR6 98 aa9.67□□□□□ -0.86
SHF-201ENST00000290894 J3QL48 77 aa9.63□□□□□ -0.87
SHF-201ENST00000290894 S4R3F8 94 aa9.62□□□□□ -0.87
SHF-201ENST00000290894 H0YAA0 97 aa9.61□□□□□ -0.87
SHF-201ENST00000290894 A0A1B0GU33 70 aa9.6□□□□□ -0.87
SHF-201ENST00000290894 H1FX-AS1Q4G0G2 97 aa9.56□□□□□ -0.88
SHF-201ENST00000290894 BIRC6Q9NR09 4857 aa9.55□□□□□ -0.88
SHF-201ENST00000290894 KRTAP25-1Q3LHN0 102 aa9.48□□□□□ -0.89
SHF-201ENST00000290894 KRTAP10-6P60371 365 aaPredicted RBP9.47□□□□□ -0.89
SHF-201ENST00000290894 KRTAP3-2Q9BYR7 98 aa9.43□□□□□ -0.9
SHF-201ENST00000290894 MUC2Q02817 5179 aa9.41□□□□□ -0.9
SHF-201ENST00000290894 P0C880 135 aa9.41□□□□□ -0.9
SHF-201ENST00000290894 MUC17Q685J3 4493 aa9.4□□□□□ -0.9
SHF-201ENST00000290894 HERC1Q15751 4861 aa9.39□□□□□ -0.91
SHF-201ENST00000290894 KRTAP4-1Q9BYQ7 146 aa9.39□□□□□ -0.91
SHF-201ENST00000290894 PCLOQ9Y6V0 5065 aa9.39□□□□□ -0.91
SHF-201ENST00000290894 SEC61BP60468 96 aaKnown RBP9.39□□□□□ -0.91
SHF-201ENST00000290894 KRTAP13-4Q3LI77 160 aa9.38□□□□□ -0.91
SHF-201ENST00000290894 A0A0D9SG42 100 aa9.32□□□□□ -0.92
SHF-201ENST00000290894 K7ERS5 55 aa9.26□□□□□ -0.93
SHF-201ENST00000290894 HMCN2Q8NDA2 5059 aa9.13□□□□□ -0.95
SHF-201ENST00000290894 KRTAP19-2Q3LHN2 52 aa9.09□□□□□ -0.95
SHF-201ENST00000290894 CRIPTQ9P021 101 aa9.06□□□□□ -0.96
SHF-201ENST00000290894 NDUFAF8A1L188 74 aa9.05□□□□□ -0.96
SHF-201ENST00000290894 KRTAP12-2P59991 146 aa9.03□□□□□ -0.96
SHF-201ENST00000290894 SPINT4Q6UDR6 99 aa9.01□□□□□ -0.97
SHF-201ENST00000290894 LORP23490 312 aaPredicted RBP8.98□□□□□ -0.97
SHF-201ENST00000290894 M0QZ58 72 aa8.98□□□□□ -0.97
SHF-201ENST00000290894 FAT4Q6V0I7 4981 aa8.96□□□□□ -0.98
SHF-201ENST00000290894 KRTAP12-1P59990 96 aa8.95□□□□□ -0.98
SHF-201ENST00000290894 FLGP20930 4061 aaPredicted RBP8.95□□□□□ -0.98
SHF-201ENST00000290894 R4GN34 69 aa8.94□□□□□ -0.98
SHF-201ENST00000290894 KRTAP15-1Q3LI76 137 aa8.91□□□□□ -0.98
SHF-201ENST00000290894 RNF213Q63HN8 5207 aa8.9□□□□□ -0.99
SHF-201ENST00000290894 LUZP6Q538Z0 58 aa8.89□□□□□ -0.99
SHF-201ENST00000290894 UBR4Q5T4S7 5183 aa8.88□□□□□ -0.99
SHF-201ENST00000290894 C10orf95Q9H7T3 257 aa8.73□□□□□ -1.01
SHF-201ENST00000290894 LCE2CQ5TA81 110 aa8.72□□□□□ -1.01
SHF-201ENST00000290894 M0R2T5 61 aa8.58□□□□□ -1.04
SHF-201ENST00000290894 MT1HP80294 61 aa8.52□□□□□ -1.05
SHF-201ENST00000290894 CAMK2N1Q7Z7J9 78 aa8.45□□□□□ -1.06
SHF-201ENST00000290894 MT1FP04733 61 aa8.3□□□□□ -1.08
SHF-201ENST00000290894 KRTAP10-10P60014 251 aa8.3□□□□□ -1.08
SHF-201ENST00000290894 KRTAP19-1Q8IUB9 90 aa8.3□□□□□ -1.08
SHF-201ENST00000290894 MT2AP02795 61 aa8.29□□□□□ -1.08
SHF-201ENST00000290894 KRTAP9-8Q9BYQ0 159 aa8.26□□□□□ -1.09
SHF-201ENST00000290894 SPRR2GQ9BYE4 73 aa8.26□□□□□ -1.09
SHF-201ENST00000290894 PLAC4Q8WY50 150 aa8.14□□□□□ -1.11
SHF-201ENST00000290894 TNP1P09430 55 aa8.03□□□□□ -1.12
SHF-201ENST00000290894 PP632Q6XCG6 107 aa8□□□□□ -1.13
SHF-201ENST00000290894 KRTAP19-8Q3LI54 63 aa7.92□□□□□ -1.14
SHF-201ENST00000290894 MT1BP07438 61 aa7.92□□□□□ -1.14
SHF-201ENST00000290894 KRTAP9-3Q9BYQ3 159 aa7.92□□□□□ -1.14
SHF-201ENST00000290894 USH2AO75445 5202 aa7.81□□□□□ -1.16
SHF-201ENST00000290894 KRTAP10-5P60370 271 aa7.78□□□□□ -1.16
SHF-201ENST00000290894 MT1XP80297 61 aa7.78□□□□□ -1.16
SHF-201ENST00000290894 PRO2289Q9P1D8 64 aa7.78□□□□□ -1.16
SHF-201ENST00000290894 LCE2AQ5TA79 106 aaPredicted RBP7.77□□□□□ -1.17
SHF-201ENST00000290894 KRTAP23-1A1A580 65 aa7.74□□□□□ -1.17
SHF-201ENST00000290894 LCE3AQ5TA76 89 aa7.72□□□□□ -1.17
SHF-201ENST00000290894 LCE2BO14633 110 aa7.71□□□□□ -1.18
SHF-201ENST00000290894 KRTAP10-7P60409 375 aaPredicted RBP7.58□□□□□ -1.2
SHF-201ENST00000290894 KRTAP10-12P60413 245 aa7.51□□□□□ -1.21
SHF-201ENST00000290894 KMT2DO14686 5537 aa7.48□□□□□ -1.21
SHF-201ENST00000290894 INE1O15225 51 aa7.44□□□□□ -1.22
SHF-201ENST00000290894 KRTAP8-1Q8IUC2 63 aa7.43□□□□□ -1.22
SHF-201ENST00000290894 FSIP2Q5CZC0 6907 aa7.41□□□□□ -1.22
SHF-201ENST00000290894 SPRR5A0A1B0GTR4 108 aa7.4□□□□□ -1.22
SHF-201ENST00000290894 KRTAP12-3P60328 96 aa7.34□□□□□ -1.23
SHF-201ENST00000290894 KRTAP4-8A0A0G2JLE6 195 aa7.26□□□□□ -1.25
SHF-201ENST00000290894 KRTAP4-8Q9BYQ9 185 aa7.26□□□□□ -1.25
SHF-201ENST00000290894 SSPOA2VEC9 5147 aa7.23□□□□□ -1.25
SHF-201ENST00000290894 KRTAP19-5Q3LI72 72 aa7.19□□□□□ -1.26
SHF-201ENST00000290894 KRTAP19-6Q3LI70 58 aa6.94□□□□□ -1.3
SHF-201ENST00000290894 KRTAP19-7Q3SYF9 63 aa6.94□□□□□ -1.3
SHF-201ENST00000290894 LCE3CQ5T5A8 94 aa6.87□□□□□ -1.31
SHF-201ENST00000290894 FCGBPQ9Y6R7 5405 aaPredicted RBP6.82□□□□□ -1.32
SHF-201ENST00000290894 KRTAP4-7Q9BYR0 210 aa6.8□□□□□ -1.32
SHF-201ENST00000290894 MT1EP04732 61 aa6.75□□□□□ -1.33
SHF-201ENST00000290894 LCE2DQ5TA82 110 aaPredicted RBP6.72□□□□□ -1.33
SHF-201ENST00000290894 MUC12Q9UKN1 5478 aa6.7□□□□□ -1.34
SHF-201ENST00000290894 MT1LQ93083 61 aa6.69□□□□□ -1.34
SHF-201ENST00000290894 KRTAP9-6A8MVA2 160 aa6.67□□□□□ -1.34
SHF-201ENST00000290894 MACF1Q9UPN3 7388 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms