RNA–Protein interactions for RNA: ENST00000288873.7

KRTCAP3-201, Transcript of keratinocyte associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRTCAP3, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-201ENST00000288873 MT1FP04733 61 aa9.13□□□□□ -0.95
KRTCAP3-201ENST00000288873 C20orf197Q8N268 126 aa9.13□□□□□ -0.95
KRTCAP3-201ENST00000288873 KRTAP10-10P60014 251 aa9.12□□□□□ -0.95
KRTCAP3-201ENST00000288873 KRTAP3-3Q9BYR6 98 aa9.11□□□□□ -0.95
KRTCAP3-201ENST00000288873 DMAC1Q96GE9 116 aa9.08□□□□□ -0.96
KRTCAP3-201ENST00000288873 COX7CP15954 63 aa9.05□□□□□ -0.96
KRTCAP3-201ENST00000288873 NDUFC1O43677 76 aa9.04□□□□□ -0.96
KRTCAP3-201ENST00000288873 ANAPC13Q9BS18 74 aa8.98□□□□□ -0.97
KRTCAP3-201ENST00000288873 KRTAP9-3Q9BYQ3 159 aa8.98□□□□□ -0.97
KRTCAP3-201ENST00000288873 ACYP2P14621 99 aa8.95□□□□□ -0.98
KRTCAP3-201ENST00000288873 SPANXA2-OT1Q8N9U9 137 aa8.94□□□□□ -0.98
KRTCAP3-201ENST00000288873 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.88□□□□□ -0.99
KRTCAP3-201ENST00000288873 CYSTM1Q9H1C7 97 aa8.85□□□□□ -0.99
KRTCAP3-201ENST00000288873 KRTAP9-7A8MTY7 169 aa8.84□□□□□ -0.99
KRTCAP3-201ENST00000288873 LCE2BO14633 110 aa8.84□□□□□ -0.99
KRTCAP3-201ENST00000288873 H0YAA0 97 aa8.82□□□□□ -1
KRTCAP3-201ENST00000288873 USH2AO75445 5202 aa8.82□□□□□ -1
KRTCAP3-201ENST00000288873 H7BZZ5 65 aa8.81□□□□□ -1
KRTCAP3-201ENST00000288873 SSPOA2VEC9 5147 aa8.81□□□□□ -1
KRTCAP3-201ENST00000288873 CHKB-CPT1BH3BT56 60 aa8.8□□□□□ -1
KRTCAP3-201ENST00000288873 CCDC179H3BU77 68 aa8.79□□□□□ -1
KRTCAP3-201ENST00000288873 ADM2Q7Z4H4 148 aa8.77□□□□□ -1.01
KRTCAP3-201ENST00000288873 SPTSSBQ8NFR3 76 aa8.77□□□□□ -1.01
KRTCAP3-201ENST00000288873 KRTAP19-1Q8IUB9 90 aa8.72□□□□□ -1.01
KRTCAP3-201ENST00000288873 CRIPTQ9P021 101 aa8.69□□□□□ -1.02
KRTCAP3-201ENST00000288873 COA5Q86WW8 74 aa8.68□□□□□ -1.02
KRTCAP3-201ENST00000288873 SPRR2GQ9BYE4 73 aa8.67□□□□□ -1.02
KRTCAP3-201ENST00000288873 FCGBPQ9Y6R7 5405 aaPredicted RBP8.66□□□□□ -1.02
KRTCAP3-201ENST00000288873 P0C880 135 aa8.63□□□□□ -1.03
KRTCAP3-201ENST00000288873 KRTAP3-2Q9BYR7 98 aa8.62□□□□□ -1.03
KRTCAP3-201ENST00000288873 KRTAP19-8Q3LI54 63 aa8.55□□□□□ -1.04
KRTCAP3-201ENST00000288873 ATP5EP56381 51 aaPredicted RBP8.52□□□□□ -1.05
KRTCAP3-201ENST00000288873 Q5VV11 94 aa8.52□□□□□ -1.05
KRTCAP3-201ENST00000288873 R4GN34 69 aa8.51□□□□□ -1.05
KRTCAP3-201ENST00000288873 MT1BP07438 61 aa8.49□□□□□ -1.05
KRTCAP3-201ENST00000288873 M0QZ58 72 aa8.47□□□□□ -1.05
KRTCAP3-201ENST00000288873 TMEM258P61165 79 aa8.46□□□□□ -1.06
KRTCAP3-201ENST00000288873 KRTAP19-6Q3LI70 58 aa8.46□□□□□ -1.06
KRTCAP3-201ENST00000288873 MACF1Q9UPN3 7388 aaKnown RBP8.39□□□□□ -1.07
KRTCAP3-201ENST00000288873 SEC61GP60059 68 aa8.37□□□□□ -1.07
KRTCAP3-201ENST00000288873 SERP1Q9Y6X1 66 aa8.35□□□□□ -1.07
KRTCAP3-201ENST00000288873 SYNE2Q8WXH0 6885 aaKnown RBP8.34□□□□□ -1.07
KRTCAP3-201ENST00000288873 LINC01554Q52M75 96 aa8.33□□□□□ -1.08
KRTCAP3-201ENST00000288873 PLAC4Q8WY50 150 aa8.27□□□□□ -1.09
KRTCAP3-201ENST00000288873 A6NN06 94 aa8.24□□□□□ -1.09
KRTCAP3-201ENST00000288873 A0A1B0GU69 56 aa8.23□□□□□ -1.09
KRTCAP3-201ENST00000288873 PCP4P48539 62 aa8.23□□□□□ -1.09
KRTCAP3-201ENST00000288873 KRTAP13-4Q3LI77 160 aa8.23□□□□□ -1.09
KRTCAP3-201ENST00000288873 KRTAP6-3Q3LI67 103 aa8.22□□□□□ -1.09
KRTCAP3-201ENST00000288873 KRTAP10-5P60370 271 aa8.21□□□□□ -1.1
KRTCAP3-201ENST00000288873 A0A1B0GU33 70 aa8.19□□□□□ -1.1
KRTCAP3-201ENST00000288873 LINC01558Q9Y6Z2 57 aa8.13□□□□□ -1.11
KRTCAP3-201ENST00000288873 SPATA8Q6RVD6 105 aa8.11□□□□□ -1.11
KRTCAP3-201ENST00000288873 PRR15LQ9BU68 103 aa8.11□□□□□ -1.11
KRTCAP3-201ENST00000288873 MT1XP80297 61 aa8.07□□□□□ -1.12
KRTCAP3-201ENST00000288873 PRO2289Q9P1D8 64 aa8.07□□□□□ -1.12
KRTCAP3-201ENST00000288873 A0A0D9SG42 100 aa8.05□□□□□ -1.12
KRTCAP3-201ENST00000288873 SMIM26A0A096LP01 95 aa7.95□□□□□ -1.14
KRTCAP3-201ENST00000288873 V9GYY9 64 aa7.92□□□□□ -1.14
KRTCAP3-201ENST00000288873 A8MU10 97 aa7.9□□□□□ -1.14
KRTCAP3-201ENST00000288873 SPINT4Q6UDR6 99 aa7.9□□□□□ -1.14
KRTCAP3-201ENST00000288873 CAMK2N1Q7Z7J9 78 aa7.9□□□□□ -1.14
KRTCAP3-201ENST00000288873 Q1T7F1 81 aa7.89□□□□□ -1.15
KRTCAP3-201ENST00000288873 KRTAP12-1P59990 96 aa7.88□□□□□ -1.15
KRTCAP3-201ENST00000288873 RPS28P62857 69 aaKnown RBP7.87□□□□□ -1.15
KRTCAP3-201ENST00000288873 NEBP20929 6669 aa7.85□□□□□ -1.15
KRTCAP3-201ENST00000288873 UQCR11O14957 56 aa7.85□□□□□ -1.15
KRTCAP3-201ENST00000288873 KRTAP12-2P59991 146 aa7.83□□□□□ -1.16
KRTCAP3-201ENST00000288873 PSPHP1O15172 72 aa7.82□□□□□ -1.16
KRTCAP3-201ENST00000288873 MUC12Q9UKN1 5478 aa7.81□□□□□ -1.16
KRTCAP3-201ENST00000288873 KRTAP5-9P26371 169 aa7.74□□□□□ -1.17
KRTCAP3-201ENST00000288873 KRTAP10-7P60409 375 aaPredicted RBP7.72□□□□□ -1.17
KRTCAP3-201ENST00000288873 MIR22HGQ0VDD5 57 aa7.72□□□□□ -1.17
KRTCAP3-201ENST00000288873 KRTAP20-1Q3LI63 56 aa7.72□□□□□ -1.17
KRTCAP3-201ENST00000288873 KRTAP10-12P60413 245 aa7.66□□□□□ -1.18
KRTCAP3-201ENST00000288873 KMT2DO14686 5537 aa7.6□□□□□ -1.19
KRTCAP3-201ENST00000288873 KRTAP4-8A0A0G2JLE6 195 aa7.59□□□□□ -1.19
KRTCAP3-201ENST00000288873 A6NED7 52 aa7.59□□□□□ -1.19
KRTCAP3-201ENST00000288873 KRTAP4-8Q9BYQ9 185 aa7.59□□□□□ -1.19
KRTCAP3-201ENST00000288873 KRTAP8-1Q8IUC2 63 aa7.58□□□□□ -1.2
KRTCAP3-201ENST00000288873 MDN1Q9NU22 5596 aa7.54□□□□□ -1.2
KRTCAP3-201ENST00000288873 C10orf95Q9H7T3 257 aa7.5□□□□□ -1.21
KRTCAP3-201ENST00000288873 K7ERS5 55 aa7.49□□□□□ -1.21
KRTCAP3-201ENST00000288873 KRTAP2-3P0C7H8 128 aa7.46□□□□□ -1.22
KRTCAP3-201ENST00000288873 SPRR2FQ96RM1 72 aa7.46□□□□□ -1.22
KRTCAP3-201ENST00000288873 KRTAP2-4Q9BYR9 128 aa7.46□□□□□ -1.22
KRTCAP3-201ENST00000288873 TNP1P09430 55 aa7.39□□□□□ -1.23
KRTCAP3-201ENST00000288873 SPRR2EP22531 72 aa7.36□□□□□ -1.23
KRTCAP3-201ENST00000288873 SPRR2BP35325 72 aa7.36□□□□□ -1.23
KRTCAP3-201ENST00000288873 SPRR2AP35326 72 aa7.36□□□□□ -1.23
KRTCAP3-201ENST00000288873 CDC42SE1Q9NRR8 79 aa7.33□□□□□ -1.24
KRTCAP3-201ENST00000288873 LCE1AQ5T7P2 110 aa7.25□□□□□ -1.25
KRTCAP3-201ENST00000288873 KRTAP2-2Q9BYT5 123 aa7.22□□□□□ -1.25
KRTCAP3-201ENST00000288873 KRTAP2-1Q9BYU5 128 aa7.22□□□□□ -1.25
KRTCAP3-201ENST00000288873 LCE3AQ5TA76 89 aa7.21□□□□□ -1.26
KRTCAP3-201ENST00000288873 KRTAP19-7Q3SYF9 63 aa7.2□□□□□ -1.26
KRTCAP3-201ENST00000288873 KRTAP25-1Q3LHN0 102 aa7.19□□□□□ -1.26
KRTCAP3-201ENST00000288873 KRTAP19-5Q3LI72 72 aa7.15□□□□□ -1.26
KRTCAP3-201ENST00000288873 MT1EP04732 61 aa7.12□□□□□ -1.27
KRTCAP3-201ENST00000288873 SPRR2DP22532 72 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms