RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 A8MUN3 132 aa11.53□□□□□ -0.56
PDF-201ENST00000288022 H3BPC8 53 aa11.53□□□□□ -0.56
PDF-201ENST00000288022 MT-ATP8P03928 68 aa11.53□□□□□ -0.56
PDF-201ENST00000288022 IMUPQ9GZP8 106 aa11.53□□□□□ -0.56
PDF-201ENST00000288022 NDUFC1O43677 76 aa11.49□□□□□ -0.57
PDF-201ENST00000288022 KRTAP19-6Q3LI70 58 aa11.39□□□□□ -0.59
PDF-201ENST00000288022 FCGBPQ9Y6R7 5405 aaPredicted RBP11.37□□□□□ -0.59
PDF-201ENST00000288022 SMIM20Q8N5G0 67 aa11.35□□□□□ -0.59
PDF-201ENST00000288022 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.34□□□□□ -0.59
PDF-201ENST00000288022 TRAV7A0A075B6U4 112 aa11.32□□□□□ -0.6
PDF-201ENST00000288022 SPRR2GQ9BYE4 73 aa11.31□□□□□ -0.6
PDF-201ENST00000288022 DMAC1Q96GE9 116 aa11.28□□□□□ -0.6
PDF-201ENST00000288022 H0YAA0 97 aa11.26□□□□□ -0.61
PDF-201ENST00000288022 Q5VV11 94 aa11.24□□□□□ -0.61
PDF-201ENST00000288022 CRIPTQ9P021 101 aa11.24□□□□□ -0.61
PDF-201ENST00000288022 ADM2Q7Z4H4 148 aa11.21□□□□□ -0.61
PDF-201ENST00000288022 KRTAP19-8Q3LI54 63 aa11.2□□□□□ -0.62
PDF-201ENST00000288022 MT1BP07438 61 aa11.18□□□□□ -0.62
PDF-201ENST00000288022 KRTAP9-7A8MTY7 169 aa11.14□□□□□ -0.63
PDF-201ENST00000288022 SNURFQ9Y675 71 aa11.09□□□□□ -0.63
PDF-201ENST00000288022 ACYP2P14621 99 aa11.08□□□□□ -0.64
PDF-201ENST00000288022 MACF1Q9UPN3 7388 aaKnown RBP11.03□□□□□ -0.64
PDF-201ENST00000288022 SERP2Q8N6R1 65 aa11.03□□□□□ -0.64
PDF-201ENST00000288022 A6NN06 94 aa11.02□□□□□ -0.65
PDF-201ENST00000288022 C20orf197Q8N268 126 aa11□□□□□ -0.65
PDF-201ENST00000288022 P0C880 135 aa10.95□□□□□ -0.66
PDF-201ENST00000288022 CHKB-CPT1BH3BT56 60 aa10.93□□□□□ -0.66
PDF-201ENST00000288022 SPTSSBQ8NFR3 76 aa10.93□□□□□ -0.66
PDF-201ENST00000288022 R4GN34 69 aa10.91□□□□□ -0.66
PDF-201ENST00000288022 KRTAP10-5P60370 271 aa10.88□□□□□ -0.67
PDF-201ENST00000288022 SPANXA2-OT1Q8N9U9 137 aa10.87□□□□□ -0.67
PDF-201ENST00000288022 KRTAP3-2Q9BYR7 98 aa10.86□□□□□ -0.67
PDF-201ENST00000288022 SYNE2Q8WXH0 6885 aaKnown RBP10.85□□□□□ -0.67
PDF-201ENST00000288022 M0QZ58 72 aa10.84□□□□□ -0.67
PDF-201ENST00000288022 COX7CP15954 63 aa10.74□□□□□ -0.69
PDF-201ENST00000288022 PLAC4Q8WY50 150 aa10.74□□□□□ -0.69
PDF-201ENST00000288022 LINC01554Q52M75 96 aa10.7□□□□□ -0.7
PDF-201ENST00000288022 KRTAP6-3Q3LI67 103 aa10.67□□□□□ -0.7
PDF-201ENST00000288022 PRO2289Q9P1D8 64 aa10.62□□□□□ -0.71
PDF-201ENST00000288022 COA5Q86WW8 74 aa10.59□□□□□ -0.71
PDF-201ENST00000288022 MT1XP80297 61 aa10.55□□□□□ -0.72
PDF-201ENST00000288022 CYSTM1Q9H1C7 97 aa10.53□□□□□ -0.72
PDF-201ENST00000288022 H7BZZ5 65 aa10.52□□□□□ -0.73
PDF-201ENST00000288022 ANAPC13Q9BS18 74 aa10.52□□□□□ -0.73
PDF-201ENST00000288022 SEC61GP60059 68 aa10.36□□□□□ -0.75
PDF-201ENST00000288022 SERP1Q9Y6X1 66 aa10.33□□□□□ -0.76
PDF-201ENST00000288022 KRTAP13-4Q3LI77 160 aa10.32□□□□□ -0.76
PDF-201ENST00000288022 CCDC179H3BU77 68 aa10.28□□□□□ -0.76
PDF-201ENST00000288022 KRTAP5-9P26371 169 aa10.26□□□□□ -0.77
PDF-201ENST00000288022 KRTAP12-2P59991 146 aa10.23□□□□□ -0.77
PDF-201ENST00000288022 NEBP20929 6669 aa10.18□□□□□ -0.78
PDF-201ENST00000288022 MUC12Q9UKN1 5478 aa10.13□□□□□ -0.79
PDF-201ENST00000288022 A0A1B0GU33 70 aa10.13□□□□□ -0.79
PDF-201ENST00000288022 KRTAP8-1Q8IUC2 63 aa10.13□□□□□ -0.79
PDF-201ENST00000288022 KMT2DO14686 5537 aa10.13□□□□□ -0.79
PDF-201ENST00000288022 A0A0D9SG42 100 aa10.1□□□□□ -0.79
PDF-201ENST00000288022 CAMK2N1Q7Z7J9 78 aa10.1□□□□□ -0.79
PDF-201ENST00000288022 ATP5EP56381 51 aaPredicted RBP10.09□□□□□ -0.79
PDF-201ENST00000288022 KRTAP10-7P60409 375 aaPredicted RBP10.09□□□□□ -0.79
PDF-201ENST00000288022 SPATA8Q6RVD6 105 aa10.09□□□□□ -0.79
PDF-201ENST00000288022 SPRR2FQ96RM1 72 aa10.08□□□□□ -0.8
PDF-201ENST00000288022 A0A1B0GU69 56 aa10.07□□□□□ -0.8
PDF-201ENST00000288022 KRTAP4-8A0A0G2JLE6 195 aa10.02□□□□□ -0.81
PDF-201ENST00000288022 KRTAP4-8Q9BYQ9 185 aa10.02□□□□□ -0.81
PDF-201ENST00000288022 KRTAP10-12P60413 245 aa10.01□□□□□ -0.81
PDF-201ENST00000288022 SPINT4Q6UDR6 99 aa9.94□□□□□ -0.82
PDF-201ENST00000288022 MDN1Q9NU22 5596 aa9.9□□□□□ -0.82
PDF-201ENST00000288022 TMEM258P61165 79 aa9.9□□□□□ -0.82
PDF-201ENST00000288022 SPRR2EP22531 72 aa9.88□□□□□ -0.83
PDF-201ENST00000288022 SPRR2BP35325 72 aa9.88□□□□□ -0.83
PDF-201ENST00000288022 SPRR2AP35326 72 aa9.88□□□□□ -0.83
PDF-201ENST00000288022 SMIM26A0A096LP01 95 aa9.85□□□□□ -0.83
PDF-201ENST00000288022 PRR15LQ9BU68 103 aa9.85□□□□□ -0.83
PDF-201ENST00000288022 KRTAP12-1P59990 96 aa9.84□□□□□ -0.83
PDF-201ENST00000288022 KRTAP20-1Q3LI63 56 aa9.8□□□□□ -0.84
PDF-201ENST00000288022 A8MU10 97 aa9.76□□□□□ -0.85
PDF-201ENST00000288022 LINC01558Q9Y6Z2 57 aa9.75□□□□□ -0.85
PDF-201ENST00000288022 LCE1AQ5T7P2 110 aa9.74□□□□□ -0.85
PDF-201ENST00000288022 KRTAP2-3P0C7H8 128 aa9.6□□□□□ -0.87
PDF-201ENST00000288022 KRTAP2-4Q9BYR9 128 aa9.6□□□□□ -0.87
PDF-201ENST00000288022 SPRR2DP22532 72 aa9.55□□□□□ -0.88
PDF-201ENST00000288022 UQCR11O14957 56 aa9.5□□□□□ -0.89
PDF-201ENST00000288022 KRTAP19-7Q3SYF9 63 aa9.41□□□□□ -0.9
PDF-201ENST00000288022 C10orf95Q9H7T3 257 aa9.39□□□□□ -0.91
PDF-201ENST00000288022 TNP1P09430 55 aa9.34□□□□□ -0.91
PDF-201ENST00000288022 V9GYY9 64 aa9.34□□□□□ -0.91
PDF-201ENST00000288022 MT1EP04732 61 aa9.33□□□□□ -0.92
PDF-201ENST00000288022 MIR22HGQ0VDD5 57 aa9.31□□□□□ -0.92
PDF-201ENST00000288022 KRTAP2-2Q9BYT5 123 aa9.3□□□□□ -0.92
PDF-201ENST00000288022 KRTAP2-1Q9BYU5 128 aa9.3□□□□□ -0.92
PDF-201ENST00000288022 PSPHP1O15172 72 aa9.28□□□□□ -0.92
PDF-201ENST00000288022 KRTAP19-5Q3LI72 72 aa9.28□□□□□ -0.92
PDF-201ENST00000288022 Q1T7F1 81 aa9.26□□□□□ -0.93
PDF-201ENST00000288022 LCE3BQ5TA77 95 aa9.26□□□□□ -0.93
PDF-201ENST00000288022 KRTAP19-3Q7Z4W3 81 aa9.21□□□□□ -0.94
PDF-201ENST00000288022 LCE3AQ5TA76 89 aa9.19□□□□□ -0.94
PDF-201ENST00000288022 LCE5AQ5TCM9 118 aa9.18□□□□□ -0.94
PDF-201ENST00000288022 K7ERS5 55 aa9.13□□□□□ -0.95
PDF-201ENST00000288022 PCP4P48539 62 aa9.1□□□□□ -0.95
PDF-201ENST00000288022 MT1GP13640 62 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms