RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 A6NED7 52 aa9.63□□□□□ -0.87
VBP1-201ENST00000286428 H1FX-AS1Q4G0G2 97 aa9.63□□□□□ -0.87
VBP1-201ENST00000286428 S4R3F8 94 aa9.6□□□□□ -0.87
VBP1-201ENST00000286428 LPAP08519 4548 aa9.57□□□□□ -0.88
VBP1-201ENST00000286428 LRP2P98164 4655 aa9.56□□□□□ -0.88
VBP1-201ENST00000286428 LCA10Q71F78 164 aa9.53□□□□□ -0.88
VBP1-201ENST00000286428 PMAIP1Q13794 54 aa9.52□□□□□ -0.89
VBP1-201ENST00000286428 UQCR11O14957 56 aa9.5□□□□□ -0.89
VBP1-201ENST00000286428 CDC42SE1Q9NRR8 79 aa9.49□□□□□ -0.89
VBP1-201ENST00000286428 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.89
VBP1-201ENST00000286428 CSAG1Q6PB30 78 aa9.41□□□□□ -0.9
VBP1-201ENST00000286428 MIR22HGQ0VDD5 57 aa9.38□□□□□ -0.91
VBP1-201ENST00000286428 MUC17Q685J3 4493 aa9.37□□□□□ -0.91
VBP1-201ENST00000286428 SPATA8Q6RVD6 105 aa9.37□□□□□ -0.91
VBP1-201ENST00000286428 A0A1B0GU33 70 aa9.36□□□□□ -0.91
VBP1-201ENST00000286428 PCLOQ9Y6V0 5065 aa9.34□□□□□ -0.91
VBP1-201ENST00000286428 KRTAP4-1Q9BYQ7 146 aa9.34□□□□□ -0.91
VBP1-201ENST00000286428 KTN1-AS1Q86SY8 53 aa9.29□□□□□ -0.92
VBP1-201ENST00000286428 A8MU10 97 aa9.25□□□□□ -0.93
VBP1-201ENST00000286428 H0YAA0 97 aa9.23□□□□□ -0.93
VBP1-201ENST00000286428 A6NN06 94 aa9.2□□□□□ -0.94
VBP1-201ENST00000286428 KRTAP10-6P60371 365 aaPredicted RBP9.2□□□□□ -0.94
VBP1-201ENST00000286428 HMCN2Q8NDA2 5059 aa9.18□□□□□ -0.94
VBP1-201ENST00000286428 ADM2Q7Z4H4 148 aa9.18□□□□□ -0.94
VBP1-201ENST00000286428 KRTAP3-2Q9BYR7 98 aa9.17□□□□□ -0.94
VBP1-201ENST00000286428 HERC1Q15751 4861 aa9.17□□□□□ -0.94
VBP1-201ENST00000286428 KRTAP19-2Q3LHN2 52 aa9.15□□□□□ -0.94
VBP1-201ENST00000286428 P0C880 135 aa9.08□□□□□ -0.96
VBP1-201ENST00000286428 K7ERS5 55 aa9.04□□□□□ -0.96
VBP1-201ENST00000286428 M0QZ58 72 aa9.04□□□□□ -0.96
VBP1-201ENST00000286428 KRTAP13-4Q3LI77 160 aa8.92□□□□□ -0.98
VBP1-201ENST00000286428 R4GN34 69 aa8.9□□□□□ -0.98
VBP1-201ENST00000286428 MUC2Q02817 5179 aa8.9□□□□□ -0.99
VBP1-201ENST00000286428 FLGP20930 4061 aaPredicted RBP8.86□□□□□ -0.99
VBP1-201ENST00000286428 A0A0D9SG42 100 aa8.86□□□□□ -0.99
VBP1-201ENST00000286428 LCE2CQ5TA81 110 aa8.86□□□□□ -0.99
VBP1-201ENST00000286428 CRIPTQ9P021 101 aa8.8□□□□□ -1
VBP1-201ENST00000286428 M0R2T5 61 aa8.78□□□□□ -1
VBP1-201ENST00000286428 LCE2DQ5TA82 110 aaPredicted RBP8.78□□□□□ -1
VBP1-201ENST00000286428 MT1HP80294 61 aa8.72□□□□□ -1.01
VBP1-201ENST00000286428 SPINT4Q6UDR6 99 aa8.69□□□□□ -1.02
VBP1-201ENST00000286428 UBR4Q5T4S7 5183 aa8.68□□□□□ -1.02
VBP1-201ENST00000286428 RNF213Q63HN8 5207 aa8.68□□□□□ -1.02
VBP1-201ENST00000286428 KRTAP12-1P59990 96 aa8.67□□□□□ -1.02
VBP1-201ENST00000286428 LINC01554Q52M75 96 aa8.67□□□□□ -1.02
VBP1-201ENST00000286428 LORP23490 312 aaPredicted RBP8.66□□□□□ -1.02
VBP1-201ENST00000286428 KRTAP12-2P59991 146 aa8.64□□□□□ -1.03
VBP1-201ENST00000286428 PRAC1Q96KF2 57 aa8.62□□□□□ -1.03
VBP1-201ENST00000286428 ROMO1P60602 79 aa8.59□□□□□ -1.03
VBP1-201ENST00000286428 FAT4Q6V0I7 4981 aa8.49□□□□□ -1.05
VBP1-201ENST00000286428 KRTAP10-10P60014 251 aa8.43□□□□□ -1.06
VBP1-201ENST00000286428 SPRR2GQ9BYE4 73 aa8.43□□□□□ -1.06
VBP1-201ENST00000286428 KRTAP9-8Q9BYQ0 159 aa8.42□□□□□ -1.06
VBP1-201ENST00000286428 MT2AP02795 61 aa8.41□□□□□ -1.06
VBP1-201ENST00000286428 CAMK2N1Q7Z7J9 78 aa8.37□□□□□ -1.07
VBP1-201ENST00000286428 MT1FP04733 61 aa8.35□□□□□ -1.07
VBP1-201ENST00000286428 KRTAP19-1Q8IUB9 90 aa8.3□□□□□ -1.08
VBP1-201ENST00000286428 PLAC4Q8WY50 150 aa8.3□□□□□ -1.08
VBP1-201ENST00000286428 KRTAP25-1Q3LHN0 102 aa8.3□□□□□ -1.08
VBP1-201ENST00000286428 LCE2AQ5TA79 106 aaPredicted RBP8.2□□□□□ -1.1
VBP1-201ENST00000286428 C10orf95Q9H7T3 257 aa8.18□□□□□ -1.1
VBP1-201ENST00000286428 KRTAP19-8Q3LI54 63 aa8.15□□□□□ -1.1
VBP1-201ENST00000286428 KRTAP9-3Q9BYQ3 159 aa8.11□□□□□ -1.11
VBP1-201ENST00000286428 H3BS24 57 aa8.02□□□□□ -1.13
VBP1-201ENST00000286428 TNP1P09430 55 aa8.02□□□□□ -1.13
VBP1-201ENST00000286428 PP632Q6XCG6 107 aa7.97□□□□□ -1.13
VBP1-201ENST00000286428 MT1BP07438 61 aa7.96□□□□□ -1.13
VBP1-201ENST00000286428 KRTAP23-1A1A580 65 aa7.89□□□□□ -1.15
VBP1-201ENST00000286428 PRO2289Q9P1D8 64 aa7.86□□□□□ -1.15
VBP1-201ENST00000286428 LCE2BO14633 110 aa7.8□□□□□ -1.16
VBP1-201ENST00000286428 KRTAP10-5P60370 271 aa7.77□□□□□ -1.17
VBP1-201ENST00000286428 MT1XP80297 61 aa7.76□□□□□ -1.17
VBP1-201ENST00000286428 KRTAP15-1Q3LI76 137 aa7.57□□□□□ -1.2
VBP1-201ENST00000286428 KRTAP10-12P60413 245 aa7.51□□□□□ -1.21
VBP1-201ENST00000286428 LCE3AQ5TA76 89 aa7.5□□□□□ -1.21
VBP1-201ENST00000286428 KRTAP10-7P60409 375 aaPredicted RBP7.45□□□□□ -1.22
VBP1-201ENST00000286428 KRTAP8-1Q8IUC2 63 aa7.42□□□□□ -1.22
VBP1-201ENST00000286428 USH2AO75445 5202 aa7.4□□□□□ -1.23
VBP1-201ENST00000286428 NDUFAF8A1L188 74 aa7.37□□□□□ -1.23
VBP1-201ENST00000286428 KRTAP19-6Q3LI70 58 aa7.36□□□□□ -1.23
VBP1-201ENST00000286428 KRTAP12-3P60328 96 aa7.26□□□□□ -1.25
VBP1-201ENST00000286428 KRTAP9-2Q9BYQ4 174 aa7.25□□□□□ -1.25
VBP1-201ENST00000286428 SSPOA2VEC9 5147 aa7.15□□□□□ -1.26
VBP1-201ENST00000286428 KRTAP19-5Q3LI72 72 aa7.08□□□□□ -1.28
VBP1-201ENST00000286428 KRTAP4-8A0A0G2JLE6 195 aa7.07□□□□□ -1.28
VBP1-201ENST00000286428 KRTAP4-8Q9BYQ9 185 aa7.07□□□□□ -1.28
VBP1-201ENST00000286428 LUZP6Q538Z0 58 aa7.06□□□□□ -1.28
VBP1-201ENST00000286428 SPRR5A0A1B0GTR4 108 aa7.01□□□□□ -1.29
VBP1-201ENST00000286428 FSIP2Q5CZC0 6907 aa6.99□□□□□ -1.29
VBP1-201ENST00000286428 KRTAP19-4Q3LI73 84 aa6.96□□□□□ -1.3
VBP1-201ENST00000286428 KRTAP9-6A0A140TA67 174 aa6.94□□□□□ -1.3
VBP1-201ENST00000286428 KRTAP19-7Q3SYF9 63 aa6.91□□□□□ -1.3
VBP1-201ENST00000286428 KMT2DO14686 5537 aa6.88□□□□□ -1.31
VBP1-201ENST00000286428 LOC100996750A0A140TA64 210 aa6.87□□□□□ -1.31
VBP1-201ENST00000286428 KRTAP4-6Q9BYQ5 205 aa6.87□□□□□ -1.31
VBP1-201ENST00000286428 CRCT1Q9UGL9 99 aa6.87□□□□□ -1.31
VBP1-201ENST00000286428 MT1EP04732 61 aa6.81□□□□□ -1.32
VBP1-201ENST00000286428 FCGBPQ9Y6R7 5405 aaPredicted RBP6.8□□□□□ -1.32
VBP1-201ENST00000286428 LCE3CQ5T5A8 94 aa6.79□□□□□ -1.32
VBP1-201ENST00000286428 A0A0A0MQY5 61 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms