RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 KRTAP4-1Q9BYQ7 146 aa11.1□□□□□ -0.63
CCDC7-201ENST00000277657 RBM12B-AS1Q9P1G2 102 aa11.1□□□□□ -0.63
CCDC7-201ENST00000277657 H1FX-AS1Q4G0G2 97 aa11.07□□□□□ -0.64
CCDC7-201ENST00000277657 LCA10Q71F78 164 aa11.02□□□□□ -0.64
CCDC7-201ENST00000277657 KRTAP3-3Q9BYR6 98 aa11.02□□□□□ -0.64
CCDC7-201ENST00000277657 S4R3F8 94 aa11.02□□□□□ -0.65
CCDC7-201ENST00000277657 A0A1B0GU69 56 aa11□□□□□ -0.65
CCDC7-201ENST00000277657 SEC61GP60059 68 aa10.87□□□□□ -0.67
CCDC7-201ENST00000277657 KRTAP19-2Q3LHN2 52 aa10.86□□□□□ -0.67
CCDC7-201ENST00000277657 MUC2Q02817 5179 aa10.85□□□□□ -0.67
CCDC7-201ENST00000277657 A6NED7 52 aa10.84□□□□□ -0.67
CCDC7-201ENST00000277657 BRK1Q8WUW1 75 aa10.84□□□□□ -0.67
CCDC7-201ENST00000277657 CSAG1Q6PB30 78 aa10.75□□□□□ -0.69
CCDC7-201ENST00000277657 UBR4Q5T4S7 5183 aa10.74□□□□□ -0.69
CCDC7-201ENST00000277657 UQCR11O14957 56 aa10.7□□□□□ -0.7
CCDC7-201ENST00000277657 PRO0628Q9UI54 55 aa10.7□□□□□ -0.7
CCDC7-201ENST00000277657 CDC42SE1Q9NRR8 79 aa10.7□□□□□ -0.7
CCDC7-201ENST00000277657 A8MU10 97 aa10.69□□□□□ -0.7
CCDC7-201ENST00000277657 KRTAP3-2Q9BYR7 98 aa10.67□□□□□ -0.7
CCDC7-201ENST00000277657 FLGP20930 4061 aaPredicted RBP10.67□□□□□ -0.7
CCDC7-201ENST00000277657 KRTAP10-6P60371 365 aaPredicted RBP10.66□□□□□ -0.7
CCDC7-201ENST00000277657 RNF213Q63HN8 5207 aa10.63□□□□□ -0.71
CCDC7-201ENST00000277657 A0A1B0GU33 70 aa10.63□□□□□ -0.71
CCDC7-201ENST00000277657 SPATA8Q6RVD6 105 aa10.62□□□□□ -0.71
CCDC7-201ENST00000277657 MIR22HGQ0VDD5 57 aa10.59□□□□□ -0.71
CCDC7-201ENST00000277657 H0YAA0 97 aa10.57□□□□□ -0.72
CCDC7-201ENST00000277657 ADM2Q7Z4H4 148 aa10.55□□□□□ -0.72
CCDC7-201ENST00000277657 P0C880 135 aa10.54□□□□□ -0.72
CCDC7-201ENST00000277657 LCE2CQ5TA81 110 aa10.53□□□□□ -0.72
CCDC7-201ENST00000277657 KRTAP13-4Q3LI77 160 aa10.39□□□□□ -0.75
CCDC7-201ENST00000277657 FAT4Q6V0I7 4981 aa10.38□□□□□ -0.75
CCDC7-201ENST00000277657 MT1HP80294 61 aa10.28□□□□□ -0.76
CCDC7-201ENST00000277657 M0QZ58 72 aa10.27□□□□□ -0.77
CCDC7-201ENST00000277657 PMAIP1Q13794 54 aa10.25□□□□□ -0.77
CCDC7-201ENST00000277657 A6NN06 94 aa10.21□□□□□ -0.77
CCDC7-201ENST00000277657 LORP23490 312 aaPredicted RBP10.19□□□□□ -0.78
CCDC7-201ENST00000277657 A0A0D9SG42 100 aa10.17□□□□□ -0.78
CCDC7-201ENST00000277657 R4GN34 69 aa10.16□□□□□ -0.78
CCDC7-201ENST00000277657 SVIPQ8NHG7 77 aa10.15□□□□□ -0.78
CCDC7-201ENST00000277657 M0R2T5 61 aa10.15□□□□□ -0.79
CCDC7-201ENST00000277657 K7ERS5 55 aa10.05□□□□□ -0.8
CCDC7-201ENST00000277657 CRIPTQ9P021 101 aa10.03□□□□□ -0.8
CCDC7-201ENST00000277657 KRTAP12-1P59990 96 aa10□□□□□ -0.81
CCDC7-201ENST00000277657 KRTAP12-2P59991 146 aa9.98□□□□□ -0.81
CCDC7-201ENST00000277657 LINC01554Q52M75 96 aa9.97□□□□□ -0.81
CCDC7-201ENST00000277657 KRTAP9-8Q9BYQ0 159 aa9.95□□□□□ -0.82
CCDC7-201ENST00000277657 MT2AP02795 61 aa9.91□□□□□ -0.82
CCDC7-201ENST00000277657 SPINT4Q6UDR6 99 aa9.91□□□□□ -0.82
CCDC7-201ENST00000277657 KTN1-AS1Q86SY8 53 aa9.88□□□□□ -0.83
CCDC7-201ENST00000277657 MT1FP04733 61 aa9.87□□□□□ -0.83
CCDC7-201ENST00000277657 LCE2AQ5TA79 106 aaPredicted RBP9.85□□□□□ -0.83
CCDC7-201ENST00000277657 KRTAP10-10P60014 251 aa9.81□□□□□ -0.84
CCDC7-201ENST00000277657 SPRR2GQ9BYE4 73 aa9.81□□□□□ -0.84
CCDC7-201ENST00000277657 KRTAP19-1Q8IUB9 90 aa9.77□□□□□ -0.85
CCDC7-201ENST00000277657 KRTAP9-2Q9BYQ4 174 aa9.76□□□□□ -0.85
CCDC7-201ENST00000277657 ROMO1P60602 79 aa9.7□□□□□ -0.86
CCDC7-201ENST00000277657 PRAC1Q96KF2 57 aa9.6□□□□□ -0.87
CCDC7-201ENST00000277657 KRTAP9-3Q9BYQ3 159 aa9.58□□□□□ -0.88
CCDC7-201ENST00000277657 KRTAP19-8Q3LI54 63 aa9.53□□□□□ -0.88
CCDC7-201ENST00000277657 CAMK2N1Q7Z7J9 78 aa9.52□□□□□ -0.89
CCDC7-201ENST00000277657 KRTAP9-6A0A140TA67 174 aa9.5□□□□□ -0.89
CCDC7-201ENST00000277657 PLAC4Q8WY50 150 aa9.47□□□□□ -0.89
CCDC7-201ENST00000277657 C10orf95Q9H7T3 257 aa9.45□□□□□ -0.9
CCDC7-201ENST00000277657 LCE2DQ5TA82 110 aaPredicted RBP9.41□□□□□ -0.9
CCDC7-201ENST00000277657 MT1BP07438 61 aa9.38□□□□□ -0.91
CCDC7-201ENST00000277657 KRTAP25-1Q3LHN0 102 aa9.35□□□□□ -0.91
CCDC7-201ENST00000277657 LCE2BO14633 110 aa9.28□□□□□ -0.92
CCDC7-201ENST00000277657 CRCT1Q9UGL9 99 aa9.2□□□□□ -0.94
CCDC7-201ENST00000277657 MT1XP80297 61 aa9.12□□□□□ -0.95
CCDC7-201ENST00000277657 KRTAP10-5P60370 271 aa9.11□□□□□ -0.95
CCDC7-201ENST00000277657 TNP1P09430 55 aa9.1□□□□□ -0.95
CCDC7-201ENST00000277657 FSIP2Q5CZC0 6907 aa9.06□□□□□ -0.96
CCDC7-201ENST00000277657 USH2AO75445 5202 aa9.05□□□□□ -0.96
CCDC7-201ENST00000277657 PRO2289Q9P1D8 64 aa8.96□□□□□ -0.98
CCDC7-201ENST00000277657 PP632Q6XCG6 107 aa8.93□□□□□ -0.98
CCDC7-201ENST00000277657 KRTAP23-1A1A580 65 aa8.91□□□□□ -0.98
CCDC7-201ENST00000277657 KRTAP10-7P60409 375 aaPredicted RBP8.76□□□□□ -1.01
CCDC7-201ENST00000277657 SSPOA2VEC9 5147 aa8.76□□□□□ -1.01
CCDC7-201ENST00000277657 LCE3AQ5TA76 89 aa8.71□□□□□ -1.01
CCDC7-201ENST00000277657 KRTAP10-12P60413 245 aa8.68□□□□□ -1.02
CCDC7-201ENST00000277657 KRTAP19-6Q3LI70 58 aa8.67□□□□□ -1.02
CCDC7-201ENST00000277657 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.57□□□□□ -1.04
CCDC7-201ENST00000277657 KRTAP8-1Q8IUC2 63 aa8.56□□□□□ -1.04
CCDC7-201ENST00000277657 KRTAP9-7A8MTY7 169 aa8.52□□□□□ -1.05
CCDC7-201ENST00000277657 KMT2DO14686 5537 aa8.39□□□□□ -1.07
CCDC7-201ENST00000277657 FCGBPQ9Y6R7 5405 aaPredicted RBP8.38□□□□□ -1.07
CCDC7-201ENST00000277657 KRTAP4-8A0A0G2JLE6 195 aa8.37□□□□□ -1.07
CCDC7-201ENST00000277657 KRTAP4-8Q9BYQ9 185 aa8.37□□□□□ -1.07
CCDC7-201ENST00000277657 KRTAP12-3P60328 96 aa8.36□□□□□ -1.07
CCDC7-201ENST00000277657 KRTAP15-1Q3LI76 137 aa8.32□□□□□ -1.08
CCDC7-201ENST00000277657 KRTAP19-5Q3LI72 72 aa8.26□□□□□ -1.09
CCDC7-201ENST00000277657 KRTAP19-7Q3SYF9 63 aa8.15□□□□□ -1.11
CCDC7-201ENST00000277657 MACF1Q9UPN3 7388 aaKnown RBP8.14□□□□□ -1.11
CCDC7-201ENST00000277657 SYNE2Q8WXH0 6885 aaKnown RBP8.05□□□□□ -1.12
CCDC7-201ENST00000277657 SPRR5A0A1B0GTR4 108 aa8.02□□□□□ -1.12
CCDC7-201ENST00000277657 KRTAP6-3Q3LI67 103 aa7.98□□□□□ -1.13
CCDC7-201ENST00000277657 MT1EP04732 61 aa7.98□□□□□ -1.13
CCDC7-201ENST00000277657 MT1LQ93083 61 aa7.84□□□□□ -1.15
CCDC7-201ENST00000277657 LCE3CQ5T5A8 94 aa7.83□□□□□ -1.16
CCDC7-201ENST00000277657 KRTAP19-4Q3LI73 84 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms