RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 MYCBP2O75592 4640 aa9.66□□□□□ -0.86
SSC4D-201ENST00000275560 P0C880 135 aa9.66□□□□□ -0.86
SSC4D-201ENST00000275560 KRTAP10-4P60372 401 aaPredicted RBP9.64□□□□□ -0.87
SSC4D-201ENST00000275560 KRTAP3-3Q9BYR6 98 aa9.64□□□□□ -0.87
SSC4D-201ENST00000275560 FAT3Q8TDW7 4589 aa9.63□□□□□ -0.87
SSC4D-201ENST00000275560 RPL37P61927 97 aaKnown RBP9.61□□□□□ -0.87
SSC4D-201ENST00000275560 TPRXLQ17RH7 258 aa9.59□□□□□ -0.87
SSC4D-201ENST00000275560 C10orf95Q9H7T3 257 aa9.59□□□□□ -0.87
SSC4D-201ENST00000275560 KRTAP3-2Q9BYR7 98 aa9.57□□□□□ -0.88
SSC4D-201ENST00000275560 KRTAP10-8P60410 259 aa9.56□□□□□ -0.88
SSC4D-201ENST00000275560 TNXBP22105 4242 aa9.51□□□□□ -0.89
SSC4D-201ENST00000275560 SPINT4Q6UDR6 99 aa9.48□□□□□ -0.89
SSC4D-201ENST00000275560 S4R3F8 94 aa9.45□□□□□ -0.9
SSC4D-201ENST00000275560 A0A1B0GVY2 172 aa9.42□□□□□ -0.9
SSC4D-201ENST00000275560 LPAP08519 4548 aa9.42□□□□□ -0.9
SSC4D-201ENST00000275560 KRTAP12-2P59991 146 aa9.41□□□□□ -0.9
SSC4D-201ENST00000275560 XP32Q5T750 250 aa9.35□□□□□ -0.91
SSC4D-201ENST00000275560 KMT2CQ8NEZ4 4911 aaKnown RBP9.34□□□□□ -0.91
SSC4D-201ENST00000275560 KRTAP21-3Q3LHN1 58 aa9.32□□□□□ -0.92
SSC4D-201ENST00000275560 RYR2Q92736 4967 aa9.32□□□□□ -0.92
SSC4D-201ENST00000275560 KRTAP12-1P59990 96 aa9.25□□□□□ -0.93
SSC4D-201ENST00000275560 NDUFAF8A1L188 74 aa9.24□□□□□ -0.93
SSC4D-201ENST00000275560 KRTAP15-1Q3LI76 137 aa9.23□□□□□ -0.93
SSC4D-201ENST00000275560 LRP2P98164 4655 aa9.21□□□□□ -0.94
SSC4D-201ENST00000275560 Q5VSD8 79 aa9.13□□□□□ -0.95
SSC4D-201ENST00000275560 KRTAP17-1Q9BYP8 105 aa9.09□□□□□ -0.95
SSC4D-201ENST00000275560 RYR1P21817 5038 aa9.02□□□□□ -0.97
SSC4D-201ENST00000275560 KIAA1109Q2LD37 5005 aa8.98□□□□□ -0.97
SSC4D-201ENST00000275560 M0QZ58 72 aa8.96□□□□□ -0.97
SSC4D-201ENST00000275560 RYR3Q15413 4870 aa8.94□□□□□ -0.98
SSC4D-201ENST00000275560 MT1HL1P0DM35 61 aa8.93□□□□□ -0.98
SSC4D-201ENST00000275560 ABCA13Q86UQ4 5058 aa8.9□□□□□ -0.98
SSC4D-201ENST00000275560 R4GN34 69 aa8.83□□□□□ -1
SSC4D-201ENST00000275560 LORP23490 312 aaPredicted RBP8.81□□□□□ -1
SSC4D-201ENST00000275560 PLAC4Q8WY50 150 aa8.67□□□□□ -1.02
SSC4D-201ENST00000275560 MUC17Q685J3 4493 aa8.66□□□□□ -1.02
SSC4D-201ENST00000275560 EPPK1P58107 5090 aaKnown RBP8.63□□□□□ -1.03
SSC4D-201ENST00000275560 KRTAP4-1Q9BYQ7 146 aa8.54□□□□□ -1.04
SSC4D-201ENST00000275560 MUC2Q02817 5179 aa8.5□□□□□ -1.05
SSC4D-201ENST00000275560 KRTAP4-5Q9BYR2 181 aa8.48□□□□□ -1.05
SSC4D-201ENST00000275560 CAMK2N1Q7Z7J9 78 aa8.44□□□□□ -1.06
SSC4D-201ENST00000275560 SEC61BP60468 96 aaKnown RBP8.38□□□□□ -1.07
SSC4D-201ENST00000275560 KRTAP19-2Q3LHN2 52 aa8.3□□□□□ -1.08
SSC4D-201ENST00000275560 LUZP6Q538Z0 58 aa8.3□□□□□ -1.08
SSC4D-201ENST00000275560 PP632Q6XCG6 107 aa8.27□□□□□ -1.09
SSC4D-201ENST00000275560 PCLOQ9Y6V0 5065 aa8.18□□□□□ -1.1
SSC4D-201ENST00000275560 FLGP20930 4061 aaPredicted RBP8.18□□□□□ -1.1
SSC4D-201ENST00000275560 HERC2O95714 4834 aa8.14□□□□□ -1.11
SSC4D-201ENST00000275560 A0A0A0MQY5 61 aa8.13□□□□□ -1.11
SSC4D-201ENST00000275560 J3QL48 77 aa8.08□□□□□ -1.12
SSC4D-201ENST00000275560 TNP1P09430 55 aa8.08□□□□□ -1.12
SSC4D-201ENST00000275560 FAT4Q6V0I7 4981 aa8.04□□□□□ -1.12
SSC4D-201ENST00000275560 HERC1Q15751 4861 aa7.95□□□□□ -1.14
SSC4D-201ENST00000275560 BIRC6Q9NR09 4857 aa7.94□□□□□ -1.14
SSC4D-201ENST00000275560 SPRR5A0A1B0GTR4 108 aa7.91□□□□□ -1.14
SSC4D-201ENST00000275560 KRTAP23-1A1A580 65 aa7.82□□□□□ -1.16
SSC4D-201ENST00000275560 LCE3AQ5TA76 89 aa7.74□□□□□ -1.17
SSC4D-201ENST00000275560 KRTAP19-1Q8IUB9 90 aa7.73□□□□□ -1.17
SSC4D-201ENST00000275560 LCE2CQ5TA81 110 aa7.69□□□□□ -1.18
SSC4D-201ENST00000275560 HMCN2Q8NDA2 5059 aa7.68□□□□□ -1.18
SSC4D-201ENST00000275560 RNF213Q63HN8 5207 aa7.68□□□□□ -1.18
SSC4D-201ENST00000275560 SPRR2GQ9BYE4 73 aa7.67□□□□□ -1.18
SSC4D-201ENST00000275560 UBR4Q5T4S7 5183 aa7.62□□□□□ -1.19
SSC4D-201ENST00000275560 M0R2T5 61 aa7.6□□□□□ -1.19
SSC4D-201ENST00000275560 MT1FP04733 61 aa7.49□□□□□ -1.21
SSC4D-201ENST00000275560 KRTAP10-10P60014 251 aa7.48□□□□□ -1.21
SSC4D-201ENST00000275560 MT1HP80294 61 aa7.45□□□□□ -1.22
SSC4D-201ENST00000275560 MT2AP02795 61 aa7.43□□□□□ -1.22
SSC4D-201ENST00000275560 KRTAP8-1Q8IUC2 63 aa7.39□□□□□ -1.23
SSC4D-201ENST00000275560 KRTAP10-5P60370 271 aa7.33□□□□□ -1.24
SSC4D-201ENST00000275560 KRTAP9-8Q9BYQ0 159 aa7.33□□□□□ -1.24
SSC4D-201ENST00000275560 MT1XP80297 61 aa7.31□□□□□ -1.24
SSC4D-201ENST00000275560 PRO2289Q9P1D8 64 aa7.3□□□□□ -1.24
SSC4D-201ENST00000275560 KRTAP12-3P60328 96 aa7.29□□□□□ -1.24
SSC4D-201ENST00000275560 MT1BP07438 61 aa7.28□□□□□ -1.24
SSC4D-201ENST00000275560 KRTAP10-12P60413 245 aa7.24□□□□□ -1.25
SSC4D-201ENST00000275560 KRTAP19-8Q3LI54 63 aa7.24□□□□□ -1.25
SSC4D-201ENST00000275560 KRTAP10-7P60409 375 aaPredicted RBP7.22□□□□□ -1.25
SSC4D-201ENST00000275560 INE1O15225 51 aa7.14□□□□□ -1.27
SSC4D-201ENST00000275560 KMT2DO14686 5537 aa7.12□□□□□ -1.27
SSC4D-201ENST00000275560 USH2AO75445 5202 aa7.03□□□□□ -1.28
SSC4D-201ENST00000275560 KRTAP9-3Q9BYQ3 159 aa6.97□□□□□ -1.29
SSC4D-201ENST00000275560 KRTAP19-5Q3LI72 72 aa6.94□□□□□ -1.3
SSC4D-201ENST00000275560 LCE3CQ5T5A8 94 aa6.86□□□□□ -1.31
SSC4D-201ENST00000275560 KRTAP9-6A8MVA2 160 aa6.79□□□□□ -1.32
SSC4D-201ENST00000275560 KRTAP4-8A0A0G2JLE6 195 aa6.78□□□□□ -1.32
SSC4D-201ENST00000275560 KRTAP4-8Q9BYQ9 185 aa6.78□□□□□ -1.32
SSC4D-201ENST00000275560 LCE2BO14633 110 aa6.73□□□□□ -1.33
SSC4D-201ENST00000275560 KRTAP4-7Q9BYR0 210 aa6.69□□□□□ -1.34
SSC4D-201ENST00000275560 KRTAP19-7Q3SYF9 63 aa6.51□□□□□ -1.37
SSC4D-201ENST00000275560 KRTAP2-3P0C7H8 128 aa6.49□□□□□ -1.37
SSC4D-201ENST00000275560 KRTAP2-4Q9BYR9 128 aa6.49□□□□□ -1.37
SSC4D-201ENST00000275560 KRTAP2-1Q9BYU5 128 aa6.49□□□□□ -1.37
SSC4D-201ENST00000275560 MT1LQ93083 61 aa6.32□□□□□ -1.4
SSC4D-201ENST00000275560 LCE2AQ5TA79 106 aaPredicted RBP6.31□□□□□ -1.4
SSC4D-201ENST00000275560 MT1EP04732 61 aa6.26□□□□□ -1.41
SSC4D-201ENST00000275560 FSIP2Q5CZC0 6907 aa6.23□□□□□ -1.41
SSC4D-201ENST00000275560 LOC100996750A0A140TA64 210 aa6.22□□□□□ -1.41
SSC4D-201ENST00000275560 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
SSC4D-201ENST00000275560 KRTAP4-3Q9BYR4 195 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms