RNA–Protein interactions for RNA: ENST00000275015.9

NFKBIE-201, Transcript of NFKB inhibitor epsilon, humanhuman

TSL 1 (best) BASIC

Gene NFKBIE, Length 2,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIE-201ENST00000275015 H1FX-AS1Q4G0G2 97 aa12.26□□□□□ -0.45
NFKBIE-201ENST00000275015 RYR1P21817 5038 aa12.26□□□□□ -0.45
NFKBIE-201ENST00000275015 KRTAP17-1Q9BYP8 105 aa12.23□□□□□ -0.45
NFKBIE-201ENST00000275015 KIAA1109Q2LD37 5005 aa12.21□□□□□ -0.46
NFKBIE-201ENST00000275015 RPL37P61927 97 aaKnown RBP12.19□□□□□ -0.46
NFKBIE-201ENST00000275015 XP32Q5T750 250 aa12.18□□□□□ -0.46
NFKBIE-201ENST00000275015 CSAG1Q6PB30 78 aa12.14□□□□□ -0.47
NFKBIE-201ENST00000275015 LINC01554Q52M75 96 aa12.11□□□□□ -0.47
NFKBIE-201ENST00000275015 KRTAP3-3Q9BYR6 98 aa12.1□□□□□ -0.47
NFKBIE-201ENST00000275015 LPAP08519 4548 aa12.06□□□□□ -0.48
NFKBIE-201ENST00000275015 MT1HL1P0DM35 61 aa12□□□□□ -0.49
NFKBIE-201ENST00000275015 KRTAP10-6P60371 365 aaPredicted RBP11.99□□□□□ -0.49
NFKBIE-201ENST00000275015 LRP2P98164 4655 aa11.97□□□□□ -0.49
NFKBIE-201ENST00000275015 S4R3F8 94 aa11.95□□□□□ -0.5
NFKBIE-201ENST00000275015 EPPK1P58107 5090 aaKnown RBP11.91□□□□□ -0.5
NFKBIE-201ENST00000275015 KRTAP13-4Q3LI77 160 aa11.91□□□□□ -0.5
NFKBIE-201ENST00000275015 KRTAP3-2Q9BYR7 98 aa11.9□□□□□ -0.5
NFKBIE-201ENST00000275015 A0A0D9SG42 100 aa11.85□□□□□ -0.51
NFKBIE-201ENST00000275015 K7ERS5 55 aa11.85□□□□□ -0.51
NFKBIE-201ENST00000275015 P0C880 135 aa11.81□□□□□ -0.52
NFKBIE-201ENST00000275015 ABCA13Q86UQ4 5058 aa11.8□□□□□ -0.52
NFKBIE-201ENST00000275015 CRIPTQ9P021 101 aa11.79□□□□□ -0.52
NFKBIE-201ENST00000275015 KRTAP25-1Q3LHN0 102 aa11.75□□□□□ -0.53
NFKBIE-201ENST00000275015 TPRXLQ17RH7 258 aa11.66□□□□□ -0.54
NFKBIE-201ENST00000275015 ROMO1P60602 79 aa11.62□□□□□ -0.55
NFKBIE-201ENST00000275015 KRTAP4-5Q9BYR2 181 aa11.6□□□□□ -0.55
NFKBIE-201ENST00000275015 KRTAP12-2P59991 146 aa11.51□□□□□ -0.57
NFKBIE-201ENST00000275015 SPINT4Q6UDR6 99 aa11.43□□□□□ -0.58
NFKBIE-201ENST00000275015 H3BS24 57 aa11.41□□□□□ -0.58
NFKBIE-201ENST00000275015 KRTAP12-1P59990 96 aa11.38□□□□□ -0.59
NFKBIE-201ENST00000275015 C10orf95Q9H7T3 257 aa11.34□□□□□ -0.59
NFKBIE-201ENST00000275015 MUC17Q685J3 4493 aa11.31□□□□□ -0.6
NFKBIE-201ENST00000275015 M0QZ58 72 aa11.3□□□□□ -0.6
NFKBIE-201ENST00000275015 HERC2O95714 4834 aa11.26□□□□□ -0.61
NFKBIE-201ENST00000275015 SEC61BP60468 96 aaKnown RBP11.23□□□□□ -0.61
NFKBIE-201ENST00000275015 KRTAP4-1Q9BYQ7 146 aa11.22□□□□□ -0.61
NFKBIE-201ENST00000275015 MUC2Q02817 5179 aa11.18□□□□□ -0.62
NFKBIE-201ENST00000275015 J3QL48 77 aa11.16□□□□□ -0.62
NFKBIE-201ENST00000275015 R4GN34 69 aa11.14□□□□□ -0.63
NFKBIE-201ENST00000275015 LORP23490 312 aaPredicted RBP11.09□□□□□ -0.63
NFKBIE-201ENST00000275015 KRTAP19-2Q3LHN2 52 aa10.95□□□□□ -0.66
NFKBIE-201ENST00000275015 HERC1Q15751 4861 aa10.82□□□□□ -0.68
NFKBIE-201ENST00000275015 FLGP20930 4061 aaPredicted RBP10.78□□□□□ -0.68
NFKBIE-201ENST00000275015 BIRC6Q9NR09 4857 aa10.78□□□□□ -0.68
NFKBIE-201ENST00000275015 KRTAP15-1Q3LI76 137 aa10.71□□□□□ -0.7
NFKBIE-201ENST00000275015 PCLOQ9Y6V0 5065 aa10.66□□□□□ -0.7
NFKBIE-201ENST00000275015 FAT4Q6V0I7 4981 aa10.61□□□□□ -0.71
NFKBIE-201ENST00000275015 HMCN2Q8NDA2 5059 aa10.6□□□□□ -0.71
NFKBIE-201ENST00000275015 CAMK2N1Q7Z7J9 78 aa10.58□□□□□ -0.72
NFKBIE-201ENST00000275015 NDUFAF8A1L188 74 aa10.57□□□□□ -0.72
NFKBIE-201ENST00000275015 RNF213Q63HN8 5207 aa10.35□□□□□ -0.75
NFKBIE-201ENST00000275015 LCE2CQ5TA81 110 aa10.32□□□□□ -0.76
NFKBIE-201ENST00000275015 PLAC4Q8WY50 150 aa10.3□□□□□ -0.76
NFKBIE-201ENST00000275015 UBR4Q5T4S7 5183 aa10.29□□□□□ -0.76
NFKBIE-201ENST00000275015 PP632Q6XCG6 107 aa10.21□□□□□ -0.77
NFKBIE-201ENST00000275015 M0R2T5 61 aa10.15□□□□□ -0.79
NFKBIE-201ENST00000275015 TNP1P09430 55 aa10.11□□□□□ -0.79
NFKBIE-201ENST00000275015 KRTAP19-1Q8IUB9 90 aa10.07□□□□□ -0.8
NFKBIE-201ENST00000275015 SPRR2GQ9BYE4 73 aa10.05□□□□□ -0.8
NFKBIE-201ENST00000275015 MT1HP80294 61 aa10.04□□□□□ -0.8
NFKBIE-201ENST00000275015 MT1FP04733 61 aa9.91□□□□□ -0.82
NFKBIE-201ENST00000275015 KRTAP10-10P60014 251 aa9.9□□□□□ -0.82
NFKBIE-201ENST00000275015 MT2AP02795 61 aa9.88□□□□□ -0.83
NFKBIE-201ENST00000275015 KRTAP23-1A1A580 65 aa9.83□□□□□ -0.84
NFKBIE-201ENST00000275015 KRTAP9-8Q9BYQ0 159 aa9.81□□□□□ -0.84
NFKBIE-201ENST00000275015 LUZP6Q538Z0 58 aa9.78□□□□□ -0.84
NFKBIE-201ENST00000275015 LCE3AQ5TA76 89 aa9.66□□□□□ -0.86
NFKBIE-201ENST00000275015 A0A0A0MQY5 61 aa9.62□□□□□ -0.87
NFKBIE-201ENST00000275015 KRTAP19-8Q3LI54 63 aa9.58□□□□□ -0.88
NFKBIE-201ENST00000275015 MT1BP07438 61 aa9.54□□□□□ -0.88
NFKBIE-201ENST00000275015 SPRR5A0A1B0GTR4 108 aa9.53□□□□□ -0.88
NFKBIE-201ENST00000275015 KRTAP10-5P60370 271 aa9.49□□□□□ -0.89
NFKBIE-201ENST00000275015 MT1XP80297 61 aa9.47□□□□□ -0.89
NFKBIE-201ENST00000275015 KRTAP9-3Q9BYQ3 159 aa9.39□□□□□ -0.91
NFKBIE-201ENST00000275015 KRTAP8-1Q8IUC2 63 aa9.33□□□□□ -0.92
NFKBIE-201ENST00000275015 KRTAP10-7P60409 375 aaPredicted RBP9.25□□□□□ -0.93
NFKBIE-201ENST00000275015 KRTAP10-12P60413 245 aa9.25□□□□□ -0.93
NFKBIE-201ENST00000275015 USH2AO75445 5202 aa9.25□□□□□ -0.93
NFKBIE-201ENST00000275015 KRTAP12-3P60328 96 aa9.17□□□□□ -0.94
NFKBIE-201ENST00000275015 LCE2BO14633 110 aa9.07□□□□□ -0.96
NFKBIE-201ENST00000275015 PRO2289Q9P1D8 64 aa9.05□□□□□ -0.96
NFKBIE-201ENST00000275015 KMT2DO14686 5537 aa9.05□□□□□ -0.96
NFKBIE-201ENST00000275015 LCE2AQ5TA79 106 aaPredicted RBP8.85□□□□□ -0.99
NFKBIE-201ENST00000275015 KRTAP19-5Q3LI72 72 aa8.84□□□□□ -0.99
NFKBIE-201ENST00000275015 KRTAP4-8A0A0G2JLE6 195 aa8.75□□□□□ -1.01
NFKBIE-201ENST00000275015 KRTAP4-8Q9BYQ9 185 aa8.75□□□□□ -1.01
NFKBIE-201ENST00000275015 LCE3CQ5T5A8 94 aa8.62□□□□□ -1.03
NFKBIE-201ENST00000275015 FSIP2Q5CZC0 6907 aa8.48□□□□□ -1.05
NFKBIE-201ENST00000275015 KRTAP19-7Q3SYF9 63 aa8.44□□□□□ -1.06
NFKBIE-201ENST00000275015 SSPOA2VEC9 5147 aa8.42□□□□□ -1.06
NFKBIE-201ENST00000275015 INE1O15225 51 aa8.39□□□□□ -1.07
NFKBIE-201ENST00000275015 KRTAP9-6A8MVA2 160 aa8.38□□□□□ -1.07
NFKBIE-201ENST00000275015 KRTAP4-7Q9BYR0 210 aa8.37□□□□□ -1.07
NFKBIE-201ENST00000275015 MT1EP04732 61 aa8.18□□□□□ -1.1
NFKBIE-201ENST00000275015 MT1LQ93083 61 aa8.17□□□□□ -1.1
NFKBIE-201ENST00000275015 KRTAP19-6Q3LI70 58 aa8.05□□□□□ -1.12
NFKBIE-201ENST00000275015 FCGBPQ9Y6R7 5405 aaPredicted RBP8.01□□□□□ -1.13
NFKBIE-201ENST00000275015 MUC12Q9UKN1 5478 aa7.97□□□□□ -1.13
NFKBIE-201ENST00000275015 KRTAP2-3P0C7H8 128 aa7.96□□□□□ -1.14
NFKBIE-201ENST00000275015 KRTAP2-4Q9BYR9 128 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms