RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 A6NED7 52 aa10.74□□□□□ -0.69
GFRA3-201ENST00000274721 KRTAP3-3Q9BYR6 98 aa10.74□□□□□ -0.69
GFRA3-201ENST00000274721 H1FX-AS1Q4G0G2 97 aa10.71□□□□□ -0.69
GFRA3-201ENST00000274721 LCA10Q71F78 164 aa10.71□□□□□ -0.69
GFRA3-201ENST00000274721 RBM12B-AS1Q9P1G2 102 aa10.7□□□□□ -0.7
GFRA3-201ENST00000274721 S4R3F8 94 aa10.67□□□□□ -0.7
GFRA3-201ENST00000274721 A8MU10 97 aa10.66□□□□□ -0.7
GFRA3-201ENST00000274721 SEC61GP60059 68 aa10.65□□□□□ -0.7
GFRA3-201ENST00000274721 KRTAP4-1Q9BYQ7 146 aa10.65□□□□□ -0.7
GFRA3-201ENST00000274721 CDC42SE1Q9NRR8 79 aa10.62□□□□□ -0.71
GFRA3-201ENST00000274721 HERC1Q15751 4861 aa10.62□□□□□ -0.71
GFRA3-201ENST00000274721 MUC17Q685J3 4493 aa10.61□□□□□ -0.71
GFRA3-201ENST00000274721 UQCR11O14957 56 aa10.56□□□□□ -0.72
GFRA3-201ENST00000274721 HMCN2Q8NDA2 5059 aa10.53□□□□□ -0.72
GFRA3-201ENST00000274721 SPATA8Q6RVD6 105 aa10.51□□□□□ -0.73
GFRA3-201ENST00000274721 SVIPQ8NHG7 77 aa10.49□□□□□ -0.73
GFRA3-201ENST00000274721 MIR22HGQ0VDD5 57 aa10.46□□□□□ -0.74
GFRA3-201ENST00000274721 KRTAP19-2Q3LHN2 52 aa10.45□□□□□ -0.74
GFRA3-201ENST00000274721 A0A1B0GU33 70 aa10.43□□□□□ -0.74
GFRA3-201ENST00000274721 KRTAP10-6P60371 365 aaPredicted RBP10.43□□□□□ -0.74
GFRA3-201ENST00000274721 CSAG1Q6PB30 78 aa10.42□□□□□ -0.74
GFRA3-201ENST00000274721 KRTAP3-2Q9BYR7 98 aa10.41□□□□□ -0.74
GFRA3-201ENST00000274721 MUC2Q02817 5179 aa10.35□□□□□ -0.75
GFRA3-201ENST00000274721 H0YAA0 97 aa10.34□□□□□ -0.75
GFRA3-201ENST00000274721 P0C880 135 aa10.28□□□□□ -0.76
GFRA3-201ENST00000274721 PMAIP1Q13794 54 aa10.26□□□□□ -0.77
GFRA3-201ENST00000274721 ADM2Q7Z4H4 148 aa10.26□□□□□ -0.77
GFRA3-201ENST00000274721 A6NN06 94 aa10.2□□□□□ -0.78
GFRA3-201ENST00000274721 KRTAP13-4Q3LI77 160 aa10.17□□□□□ -0.78
GFRA3-201ENST00000274721 FLGP20930 4061 aaPredicted RBP10.17□□□□□ -0.78
GFRA3-201ENST00000274721 LCE2CQ5TA81 110 aa10.07□□□□□ -0.8
GFRA3-201ENST00000274721 UBR4Q5T4S7 5183 aa10.06□□□□□ -0.8
GFRA3-201ENST00000274721 M0QZ58 72 aa10.01□□□□□ -0.81
GFRA3-201ENST00000274721 RNF213Q63HN8 5207 aa9.99□□□□□ -0.81
GFRA3-201ENST00000274721 A0A0D9SG42 100 aa9.95□□□□□ -0.82
GFRA3-201ENST00000274721 KTN1-AS1Q86SY8 53 aa9.91□□□□□ -0.82
GFRA3-201ENST00000274721 LORP23490 312 aaPredicted RBP9.89□□□□□ -0.83
GFRA3-201ENST00000274721 FAT4Q6V0I7 4981 aa9.89□□□□□ -0.83
GFRA3-201ENST00000274721 K7ERS5 55 aa9.89□□□□□ -0.83
GFRA3-201ENST00000274721 R4GN34 69 aa9.86□□□□□ -0.83
GFRA3-201ENST00000274721 MT1HP80294 61 aa9.82□□□□□ -0.84
GFRA3-201ENST00000274721 KRTAP12-1P59990 96 aa9.78□□□□□ -0.84
GFRA3-201ENST00000274721 KRTAP12-2P59991 146 aa9.78□□□□□ -0.84
GFRA3-201ENST00000274721 LINC01554Q52M75 96 aa9.69□□□□□ -0.86
GFRA3-201ENST00000274721 SPINT4Q6UDR6 99 aa9.69□□□□□ -0.86
GFRA3-201ENST00000274721 M0R2T5 61 aa9.68□□□□□ -0.86
GFRA3-201ENST00000274721 CRIPTQ9P021 101 aa9.67□□□□□ -0.86
GFRA3-201ENST00000274721 PRAC1Q96KF2 57 aa9.6□□□□□ -0.87
GFRA3-201ENST00000274721 ROMO1P60602 79 aa9.57□□□□□ -0.88
GFRA3-201ENST00000274721 KRTAP9-8Q9BYQ0 159 aa9.52□□□□□ -0.89
GFRA3-201ENST00000274721 MT2AP02795 61 aa9.49□□□□□ -0.89
GFRA3-201ENST00000274721 MT1FP04733 61 aa9.46□□□□□ -0.9
GFRA3-201ENST00000274721 SPRR2GQ9BYE4 73 aa9.46□□□□□ -0.9
GFRA3-201ENST00000274721 KRTAP19-1Q8IUB9 90 aa9.42□□□□□ -0.9
GFRA3-201ENST00000274721 KRTAP10-10P60014 251 aa9.4□□□□□ -0.9
GFRA3-201ENST00000274721 KRTAP25-1Q3LHN0 102 aa9.31□□□□□ -0.92
GFRA3-201ENST00000274721 C10orf95Q9H7T3 257 aa9.26□□□□□ -0.93
GFRA3-201ENST00000274721 LCE2AQ5TA79 106 aaPredicted RBP9.26□□□□□ -0.93
GFRA3-201ENST00000274721 CAMK2N1Q7Z7J9 78 aa9.25□□□□□ -0.93
GFRA3-201ENST00000274721 KRTAP9-3Q9BYQ3 159 aa9.17□□□□□ -0.94
GFRA3-201ENST00000274721 KRTAP19-8Q3LI54 63 aa9.16□□□□□ -0.94
GFRA3-201ENST00000274721 PLAC4Q8WY50 150 aa9.14□□□□□ -0.95
GFRA3-201ENST00000274721 MT1BP07438 61 aa9.02□□□□□ -0.97
GFRA3-201ENST00000274721 LCE2BO14633 110 aa8.87□□□□□ -0.99
GFRA3-201ENST00000274721 TNP1P09430 55 aa8.87□□□□□ -0.99
GFRA3-201ENST00000274721 KRTAP10-5P60370 271 aa8.8□□□□□ -1
GFRA3-201ENST00000274721 MT1XP80297 61 aa8.8□□□□□ -1
GFRA3-201ENST00000274721 PP632Q6XCG6 107 aa8.76□□□□□ -1.01
GFRA3-201ENST00000274721 KRTAP23-1A1A580 65 aa8.71□□□□□ -1.01
GFRA3-201ENST00000274721 PRO2289Q9P1D8 64 aa8.59□□□□□ -1.03
GFRA3-201ENST00000274721 USH2AO75445 5202 aa8.55□□□□□ -1.04
GFRA3-201ENST00000274721 LCE3AQ5TA76 89 aa8.47□□□□□ -1.05
GFRA3-201ENST00000274721 KRTAP10-7P60409 375 aaPredicted RBP8.46□□□□□ -1.06
GFRA3-201ENST00000274721 KRTAP10-12P60413 245 aa8.39□□□□□ -1.07
GFRA3-201ENST00000274721 KRTAP15-1Q3LI76 137 aa8.34□□□□□ -1.07
GFRA3-201ENST00000274721 KRTAP8-1Q8IUC2 63 aa8.34□□□□□ -1.07
GFRA3-201ENST00000274721 LCE2DQ5TA82 110 aaPredicted RBP8.26□□□□□ -1.09
GFRA3-201ENST00000274721 KRTAP19-6Q3LI70 58 aa8.23□□□□□ -1.09
GFRA3-201ENST00000274721 SSPOA2VEC9 5147 aa8.22□□□□□ -1.09
GFRA3-201ENST00000274721 FSIP2Q5CZC0 6907 aa8.12□□□□□ -1.11
GFRA3-201ENST00000274721 KRTAP12-3P60328 96 aa8.12□□□□□ -1.11
GFRA3-201ENST00000274721 KRTAP4-8A0A0G2JLE6 195 aa8.07□□□□□ -1.12
GFRA3-201ENST00000274721 KRTAP4-8Q9BYQ9 185 aa8.07□□□□□ -1.12
GFRA3-201ENST00000274721 KMT2DO14686 5537 aa8.05□□□□□ -1.12
GFRA3-201ENST00000274721 KRTAP19-5Q3LI72 72 aa7.99□□□□□ -1.13
GFRA3-201ENST00000274721 SPRR5A0A1B0GTR4 108 aa7.94□□□□□ -1.14
GFRA3-201ENST00000274721 KRTAP19-7Q3SYF9 63 aa7.86□□□□□ -1.15
GFRA3-201ENST00000274721 FCGBPQ9Y6R7 5405 aaPredicted RBP7.84□□□□□ -1.16
GFRA3-201ENST00000274721 KRTAP9-2Q9BYQ4 174 aa7.78□□□□□ -1.16
GFRA3-201ENST00000274721 NDUFAF8A1L188 74 aa7.77□□□□□ -1.17
GFRA3-201ENST00000274721 LUZP6Q538Z0 58 aa7.71□□□□□ -1.17
GFRA3-201ENST00000274721 MT1EP04732 61 aa7.68□□□□□ -1.18
GFRA3-201ENST00000274721 LCE3CQ5T5A8 94 aa7.62□□□□□ -1.19
GFRA3-201ENST00000274721 MT1LQ93083 61 aa7.57□□□□□ -1.2
GFRA3-201ENST00000274721 KRTAP19-4Q3LI73 84 aa7.56□□□□□ -1.2
GFRA3-201ENST00000274721 CRCT1Q9UGL9 99 aa7.55□□□□□ -1.2
GFRA3-201ENST00000274721 MACF1Q9UPN3 7388 aaKnown RBP7.44□□□□□ -1.22
GFRA3-201ENST00000274721 KRTAP4-7Q9BYR0 210 aa7.39□□□□□ -1.23
GFRA3-201ENST00000274721 MUC12Q9UKN1 5478 aa7.32□□□□□ -1.24
GFRA3-201ENST00000274721 KRTAP19-3Q7Z4W3 81 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms