RNA–Protein interactions for RNA: ENST00000274695.8

CDKAL1-201, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKAL1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-201ENST00000274695 SPINK1P00995 79 aa3.26□□□□□ -1.89
CDKAL1-201ENST00000274695 PRB2P02812 416 aaPredicted RBP3.26□□□□□ -1.89
CDKAL1-201ENST00000274695 H0YAA0 97 aa3.26□□□□□ -1.89
CDKAL1-201ENST00000274695 P0C880 135 aa3.25□□□□□ -1.89
CDKAL1-201ENST00000274695 MEGF8Q7Z7M0 2845 aa3.25□□□□□ -1.89
CDKAL1-201ENST00000274695 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
CDKAL1-201ENST00000274695 NBEAL1Q6ZS30 2694 aa3.22□□□□□ -1.89
CDKAL1-201ENST00000274695 KRTAP10-4P60372 401 aaPredicted RBP3.22□□□□□ -1.89
CDKAL1-201ENST00000274695 HYDINQ4G0P3 5121 aa3.21□□□□□ -1.9
CDKAL1-201ENST00000274695 FAT3Q8TDW7 4589 aa3.21□□□□□ -1.9
CDKAL1-201ENST00000274695 LINC00304Q8N9R0 145 aa3.2□□□□□ -1.9
CDKAL1-201ENST00000274695 LRP1Q07954 4544 aaKnown RBP3.2□□□□□ -1.9
CDKAL1-201ENST00000274695 FAT1Q14517 4588 aa3.2□□□□□ -1.9
CDKAL1-201ENST00000274695 H1FX-AS1Q4G0G2 97 aa3.19□□□□□ -1.9
CDKAL1-201ENST00000274695 SPINK6Q6UWN8 80 aa3.19□□□□□ -1.9
CDKAL1-201ENST00000274695 SPINT4Q6UDR6 99 aa3.19□□□□□ -1.9
CDKAL1-201ENST00000274695 DYNC1H1Q14204 4646 aaKnown RBP3.19□□□□□ -1.9
CDKAL1-201ENST00000274695 STAB2Q8WWQ8 2551 aa3.18□□□□□ -1.9
CDKAL1-201ENST00000274695 CSAG1Q6PB30 78 aa3.18□□□□□ -1.9
CDKAL1-201ENST00000274695 KRTAP10-1P60331 282 aa3.17□□□□□ -1.9
CDKAL1-201ENST00000274695 PCLOQ9Y6V0 5065 aa3.16□□□□□ -1.9
CDKAL1-201ENST00000274695 COX6B2Q6YFQ2 88 aa3.16□□□□□ -1.9
CDKAL1-201ENST00000274695 STAB1Q9NY15 2570 aa3.15□□□□□ -1.9
CDKAL1-201ENST00000274695 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.9
CDKAL1-201ENST00000274695 KRTAP10-6P60371 365 aaPredicted RBP3.14□□□□□ -1.91
CDKAL1-201ENST00000274695 COL6A5A8TX70 2615 aa3.13□□□□□ -1.91
CDKAL1-201ENST00000274695 TGP01266 2768 aa3.12□□□□□ -1.91
CDKAL1-201ENST00000274695 DNHD1Q96M86 4753 aa3.12□□□□□ -1.91
CDKAL1-201ENST00000274695 KRTAP4-8Q9BYQ9 185 aa3.12□□□□□ -1.91
CDKAL1-201ENST00000274695 F8P00451 2351 aa3.11□□□□□ -1.91
CDKAL1-201ENST00000274695 KRTAP9-2Q9BYQ4 174 aa3.11□□□□□ -1.91
CDKAL1-201ENST00000274695 MYCBP2O75592 4640 aa3.1□□□□□ -1.91
CDKAL1-201ENST00000274695 A0A1B0GVY2 172 aa3.1□□□□□ -1.91
CDKAL1-201ENST00000274695 PRO2289Q9P1D8 64 aa3.1□□□□□ -1.91
CDKAL1-201ENST00000274695 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.09□□□□□ -1.92
CDKAL1-201ENST00000274695 BIRC6Q9NR09 4857 aa3.09□□□□□ -1.92
CDKAL1-201ENST00000274695 LOC100996750A0A140TA64 210 aa3.08□□□□□ -1.92
CDKAL1-201ENST00000274695 KRTAP4-6Q9BYQ5 205 aa3.08□□□□□ -1.92
CDKAL1-201ENST00000274695 NOTCH1P46531 2555 aa3.08□□□□□ -1.92
CDKAL1-201ENST00000274695 TPRXLQ17RH7 258 aa3.07□□□□□ -1.92
CDKAL1-201ENST00000274695 MT3P25713 68 aa3.04□□□□□ -1.92
CDKAL1-201ENST00000274695 KRTAP13-4Q3LI77 160 aa3.04□□□□□ -1.92
CDKAL1-201ENST00000274695 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
CDKAL1-201ENST00000274695 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
CDKAL1-201ENST00000274695 RPL37P61927 97 aaKnown RBP3.03□□□□□ -1.92
CDKAL1-201ENST00000274695 KRTAP10-8P60410 259 aa3.02□□□□□ -1.93
CDKAL1-201ENST00000274695 KIAA1109Q2LD37 5005 aa3.01□□□□□ -1.93
CDKAL1-201ENST00000274695 RYR2Q92736 4967 aa3□□□□□ -1.93
CDKAL1-201ENST00000274695 RYR3Q15413 4870 aa3□□□□□ -1.93
CDKAL1-201ENST00000274695 LCE3BQ5TA77 95 aa3□□□□□ -1.93
CDKAL1-201ENST00000274695 MUC17Q685J3 4493 aa2.98□□□□□ -1.93
CDKAL1-201ENST00000274695 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
CDKAL1-201ENST00000274695 FLGP20930 4061 aaPredicted RBP2.97□□□□□ -1.93
CDKAL1-201ENST00000274695 KRTAP12-1P59990 96 aa2.96□□□□□ -1.94
CDKAL1-201ENST00000274695 MGAM2Q2M2H8 2515 aa2.96□□□□□ -1.94
CDKAL1-201ENST00000274695 S4R3F8 94 aa2.94□□□□□ -1.94
CDKAL1-201ENST00000274695 M0QZ58 72 aa2.94□□□□□ -1.94
CDKAL1-201ENST00000274695 FLG2Q5D862 2391 aaPredicted RBP2.93□□□□□ -1.94
CDKAL1-201ENST00000274695 KRTAP12-2P59991 146 aa2.93□□□□□ -1.94
CDKAL1-201ENST00000274695 C9orf92A6NGG3 77 aa2.91□□□□□ -1.94
CDKAL1-201ENST00000274695 RYR1P21817 5038 aa2.88□□□□□ -1.95
CDKAL1-201ENST00000274695 KRTAP9-8Q9BYQ0 159 aa2.88□□□□□ -1.95
CDKAL1-201ENST00000274695 MT1HL1P0DM35 61 aa2.87□□□□□ -1.95
CDKAL1-201ENST00000274695 KRTAP10-12P60413 245 aa2.87□□□□□ -1.95
CDKAL1-201ENST00000274695 KRTAP19-2Q3LHN2 52 aa2.85□□□□□ -1.95
CDKAL1-201ENST00000274695 LPAP08519 4548 aa2.83□□□□□ -1.96
CDKAL1-201ENST00000274695 SPRR5A0A1B0GTR4 108 aa2.81□□□□□ -1.96
CDKAL1-201ENST00000274695 SSPOA2VEC9 5147 aa2.81□□□□□ -1.96
CDKAL1-201ENST00000274695 KMT2CQ8NEZ4 4911 aaKnown RBP2.81□□□□□ -1.96
CDKAL1-201ENST00000274695 LCE1DQ5T752 114 aa2.81□□□□□ -1.96
CDKAL1-201ENST00000274695 CRIPTQ9P021 101 aa2.81□□□□□ -1.96
CDKAL1-201ENST00000274695 HERC1Q15751 4861 aa2.8□□□□□ -1.96
CDKAL1-201ENST00000274695 C10orf95Q9H7T3 257 aa2.8□□□□□ -1.96
CDKAL1-201ENST00000274695 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
CDKAL1-201ENST00000274695 SMR3BP02814 79 aaPredicted RBP2.77□□□□□ -1.97
CDKAL1-201ENST00000274695 CRCT1Q9UGL9 99 aa2.76□□□□□ -1.97
CDKAL1-201ENST00000274695 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
CDKAL1-201ENST00000274695 A0A0D9SG42 100 aa2.74□□□□□ -1.97
CDKAL1-201ENST00000274695 Q5VSD8 79 aa2.74□□□□□ -1.97
CDKAL1-201ENST00000274695 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
CDKAL1-201ENST00000274695 LRP2P98164 4655 aa2.73□□□□□ -1.97
CDKAL1-201ENST00000274695 KRTAP4-8A0A0G2JLE6 195 aa2.71□□□□□ -1.98
CDKAL1-201ENST00000274695 PLAC4Q8WY50 150 aa2.69□□□□□ -1.98
CDKAL1-201ENST00000274695 KRTAP4-11Q9BYQ6 195 aa2.69□□□□□ -1.98
CDKAL1-201ENST00000274695 HERC2O95714 4834 aa2.67□□□□□ -1.98
CDKAL1-201ENST00000274695 KRTAP20-1Q3LI63 56 aa2.67□□□□□ -1.98
CDKAL1-201ENST00000274695 KRTAP4-9Q9BYQ8 210 aa2.65□□□□□ -1.99
CDKAL1-201ENST00000274695 KRTAP4-1Q9BYQ7 146 aa2.64□□□□□ -1.99
CDKAL1-201ENST00000274695 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
CDKAL1-201ENST00000274695 ABCA13Q86UQ4 5058 aa2.63□□□□□ -1.99
CDKAL1-201ENST00000274695 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
CDKAL1-201ENST00000274695 INE1O15225 51 aa2.62□□□□□ -1.99
CDKAL1-201ENST00000274695 NEBP20929 6669 aa2.61□□□□□ -1.99
CDKAL1-201ENST00000274695 SPRR2GQ9BYE4 73 aa2.6□□□□□ -1.99
CDKAL1-201ENST00000274695 EPPK1P58107 5090 aaKnown RBP2.58□□□□□ -2
CDKAL1-201ENST00000274695 KRTAP4-7Q9BYR0 210 aa2.55□□□□□ -2
CDKAL1-201ENST00000274695 DMBT1Q9UGM3 2413 aaPredicted RBP2.53□□□□□ -2
CDKAL1-201ENST00000274695 TNP1P09430 55 aa2.53□□□□□ -2
CDKAL1-201ENST00000274695 MUC2Q02817 5179 aa2.51□□□□□ -2.01
CDKAL1-201ENST00000274695 KRTAP4-5Q9BYR2 181 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms