RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 BIRC6Q9NR09 4857 aa12.13□□□□□ -0.47
RAB40B-201ENST00000269347 A6NN06 94 aa11.97□□□□□ -0.49
RAB40B-201ENST00000269347 COX6B2Q6YFQ2 88 aa11.94□□□□□ -0.5
RAB40B-201ENST00000269347 UQCR11O14957 56 aa11.92□□□□□ -0.5
RAB40B-201ENST00000269347 TPRXLQ17RH7 258 aa11.91□□□□□ -0.5
RAB40B-201ENST00000269347 SPATA8Q6RVD6 105 aa11.9□□□□□ -0.5
RAB40B-201ENST00000269347 SEC61GP60059 68 aa11.87□□□□□ -0.51
RAB40B-201ENST00000269347 MIR22HGQ0VDD5 57 aa11.87□□□□□ -0.51
RAB40B-201ENST00000269347 KTN1-AS1Q86SY8 53 aa11.86□□□□□ -0.51
RAB40B-201ENST00000269347 PCLOQ9Y6V0 5065 aa11.78□□□□□ -0.52
RAB40B-201ENST00000269347 KRTAP3-3Q9BYR6 98 aa11.74□□□□□ -0.53
RAB40B-201ENST00000269347 J3QL48 77 aa11.72□□□□□ -0.53
RAB40B-201ENST00000269347 MUC17Q685J3 4493 aa11.72□□□□□ -0.53
RAB40B-201ENST00000269347 HERC1Q15751 4861 aa11.68□□□□□ -0.54
RAB40B-201ENST00000269347 KRTAP4-1Q9BYQ7 146 aa11.59□□□□□ -0.55
RAB40B-201ENST00000269347 A0A1B0GU33 70 aa11.57□□□□□ -0.56
RAB40B-201ENST00000269347 H0YAA0 97 aa11.54□□□□□ -0.56
RAB40B-201ENST00000269347 H1FX-AS1Q4G0G2 97 aa11.54□□□□□ -0.56
RAB40B-201ENST00000269347 S4R3F8 94 aa11.53□□□□□ -0.56
RAB40B-201ENST00000269347 MUC2Q02817 5179 aa11.52□□□□□ -0.57
RAB40B-201ENST00000269347 HMCN2Q8NDA2 5059 aa11.48□□□□□ -0.57
RAB40B-201ENST00000269347 RBM12B-AS1Q9P1G2 102 aa11.47□□□□□ -0.57
RAB40B-201ENST00000269347 KRTAP10-6P60371 365 aaPredicted RBP11.43□□□□□ -0.58
RAB40B-201ENST00000269347 KRTAP3-2Q9BYR7 98 aa11.42□□□□□ -0.58
RAB40B-201ENST00000269347 SEC61BP60468 96 aaKnown RBP11.4□□□□□ -0.59
RAB40B-201ENST00000269347 ADM2Q7Z4H4 148 aa11.4□□□□□ -0.59
RAB40B-201ENST00000269347 PRAC1Q96KF2 57 aa11.39□□□□□ -0.59
RAB40B-201ENST00000269347 P0C880 135 aa11.3□□□□□ -0.6
RAB40B-201ENST00000269347 KRTAP19-2Q3LHN2 52 aa11.3□□□□□ -0.6
RAB40B-201ENST00000269347 KRTAP13-4Q3LI77 160 aa11.28□□□□□ -0.6
RAB40B-201ENST00000269347 K7ERS5 55 aa11.17□□□□□ -0.62
RAB40B-201ENST00000269347 CSAG1Q6PB30 78 aa11.16□□□□□ -0.62
RAB40B-201ENST00000269347 FLGP20930 4061 aaPredicted RBP11.07□□□□□ -0.64
RAB40B-201ENST00000269347 UBR4Q5T4S7 5183 aa11.05□□□□□ -0.64
RAB40B-201ENST00000269347 A0A0D9SG42 100 aa11.03□□□□□ -0.64
RAB40B-201ENST00000269347 FAT4Q6V0I7 4981 aa11.02□□□□□ -0.65
RAB40B-201ENST00000269347 RNF213Q63HN8 5207 aa10.98□□□□□ -0.65
RAB40B-201ENST00000269347 LINC01554Q52M75 96 aa10.94□□□□□ -0.66
RAB40B-201ENST00000269347 LORP23490 312 aaPredicted RBP10.92□□□□□ -0.66
RAB40B-201ENST00000269347 KRTAP25-1Q3LHN0 102 aa10.85□□□□□ -0.67
RAB40B-201ENST00000269347 ROMO1P60602 79 aa10.84□□□□□ -0.67
RAB40B-201ENST00000269347 LCE2CQ5TA81 110 aa10.83□□□□□ -0.68
RAB40B-201ENST00000269347 KRTAP12-2P59991 146 aa10.8□□□□□ -0.68
RAB40B-201ENST00000269347 M0QZ58 72 aa10.78□□□□□ -0.68
RAB40B-201ENST00000269347 CRIPTQ9P021 101 aa10.75□□□□□ -0.69
RAB40B-201ENST00000269347 KRTAP12-1P59990 96 aa10.73□□□□□ -0.69
RAB40B-201ENST00000269347 SPINT4Q6UDR6 99 aa10.7□□□□□ -0.7
RAB40B-201ENST00000269347 R4GN34 69 aa10.64□□□□□ -0.71
RAB40B-201ENST00000269347 MT1HP80294 61 aa10.51□□□□□ -0.73
RAB40B-201ENST00000269347 C10orf95Q9H7T3 257 aa10.42□□□□□ -0.74
RAB40B-201ENST00000269347 M0R2T5 61 aa10.32□□□□□ -0.76
RAB40B-201ENST00000269347 KRTAP9-8Q9BYQ0 159 aa10.22□□□□□ -0.77
RAB40B-201ENST00000269347 MT1FP04733 61 aa10.21□□□□□ -0.77
RAB40B-201ENST00000269347 MT2AP02795 61 aa10.21□□□□□ -0.78
RAB40B-201ENST00000269347 KRTAP19-1Q8IUB9 90 aa10.18□□□□□ -0.78
RAB40B-201ENST00000269347 SPRR2GQ9BYE4 73 aa10.11□□□□□ -0.79
RAB40B-201ENST00000269347 KRTAP10-10P60014 251 aa10.06□□□□□ -0.8
RAB40B-201ENST00000269347 CAMK2N1Q7Z7J9 78 aa10.01□□□□□ -0.81
RAB40B-201ENST00000269347 KRTAP15-1Q3LI76 137 aa9.82□□□□□ -0.84
RAB40B-201ENST00000269347 KRTAP9-3Q9BYQ3 159 aa9.8□□□□□ -0.84
RAB40B-201ENST00000269347 KRTAP19-8Q3LI54 63 aa9.76□□□□□ -0.85
RAB40B-201ENST00000269347 LCE2AQ5TA79 106 aaPredicted RBP9.76□□□□□ -0.85
RAB40B-201ENST00000269347 MT1BP07438 61 aa9.75□□□□□ -0.85
RAB40B-201ENST00000269347 PLAC4Q8WY50 150 aa9.74□□□□□ -0.85
RAB40B-201ENST00000269347 PP632Q6XCG6 107 aa9.7□□□□□ -0.86
RAB40B-201ENST00000269347 TNP1P09430 55 aa9.61□□□□□ -0.87
RAB40B-201ENST00000269347 H3BS24 57 aa9.6□□□□□ -0.87
RAB40B-201ENST00000269347 USH2AO75445 5202 aa9.59□□□□□ -0.87
RAB40B-201ENST00000269347 LCE2BO14633 110 aa9.55□□□□□ -0.88
RAB40B-201ENST00000269347 MT1XP80297 61 aa9.53□□□□□ -0.88
RAB40B-201ENST00000269347 KRTAP10-5P60370 271 aa9.53□□□□□ -0.88
RAB40B-201ENST00000269347 NDUFAF8A1L188 74 aa9.47□□□□□ -0.89
RAB40B-201ENST00000269347 KRTAP23-1A1A580 65 aa9.44□□□□□ -0.9
RAB40B-201ENST00000269347 LCE3AQ5TA76 89 aa9.3□□□□□ -0.92
RAB40B-201ENST00000269347 KRTAP10-7P60409 375 aaPredicted RBP9.24□□□□□ -0.93
RAB40B-201ENST00000269347 KMT2DO14686 5537 aa9.13□□□□□ -0.95
RAB40B-201ENST00000269347 SSPOA2VEC9 5147 aa9.06□□□□□ -0.96
RAB40B-201ENST00000269347 LUZP6Q538Z0 58 aa9.06□□□□□ -0.96
RAB40B-201ENST00000269347 KRTAP10-12P60413 245 aa9.05□□□□□ -0.96
RAB40B-201ENST00000269347 PRO2289Q9P1D8 64 aa9.02□□□□□ -0.97
RAB40B-201ENST00000269347 KRTAP8-1Q8IUC2 63 aa8.99□□□□□ -0.97
RAB40B-201ENST00000269347 FSIP2Q5CZC0 6907 aa8.97□□□□□ -0.97
RAB40B-201ENST00000269347 SPRR5A0A1B0GTR4 108 aa8.92□□□□□ -0.98
RAB40B-201ENST00000269347 KRTAP4-8A0A0G2JLE6 195 aa8.86□□□□□ -0.99
RAB40B-201ENST00000269347 KRTAP4-8Q9BYQ9 185 aa8.86□□□□□ -0.99
RAB40B-201ENST00000269347 KRTAP12-3P60328 96 aa8.8□□□□□ -1
RAB40B-201ENST00000269347 KRTAP19-5Q3LI72 72 aa8.71□□□□□ -1.01
RAB40B-201ENST00000269347 KRTAP19-6Q3LI70 58 aa8.65□□□□□ -1.02
RAB40B-201ENST00000269347 FCGBPQ9Y6R7 5405 aaPredicted RBP8.52□□□□□ -1.05
RAB40B-201ENST00000269347 KRTAP19-7Q3SYF9 63 aa8.52□□□□□ -1.05
RAB40B-201ENST00000269347 LCE2DQ5TA82 110 aaPredicted RBP8.51□□□□□ -1.05
RAB40B-201ENST00000269347 A0A0A0MQY5 61 aa8.42□□□□□ -1.06
RAB40B-201ENST00000269347 MT1EP04732 61 aa8.27□□□□□ -1.09
RAB40B-201ENST00000269347 LCE3CQ5T5A8 94 aa8.27□□□□□ -1.09
RAB40B-201ENST00000269347 KRTAP4-7Q9BYR0 210 aa8.24□□□□□ -1.09
RAB40B-201ENST00000269347 MUC12Q9UKN1 5478 aa8.21□□□□□ -1.1
RAB40B-201ENST00000269347 MT1LQ93083 61 aa8.18□□□□□ -1.1
RAB40B-201ENST00000269347 KRTAP9-2Q9BYQ4 174 aa8.11□□□□□ -1.11
RAB40B-201ENST00000269347 MACF1Q9UPN3 7388 aaKnown RBP8.1□□□□□ -1.11
RAB40B-201ENST00000269347 KRTAP9-6A8MVA2 160 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms