RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 LRP1Q07954 4544 aaKnown RBP8.94□□□□□ -0.98
SPG7-201ENST00000268704 P0C880 135 aa8.94□□□□□ -0.98
SPG7-201ENST00000268704 HSPG2P98160 4391 aa8.91□□□□□ -0.98
SPG7-201ENST00000268704 EPPK1P58107 5090 aaKnown RBP8.9□□□□□ -0.98
SPG7-201ENST00000268704 FAT3Q8TDW7 4589 aa8.88□□□□□ -0.99
SPG7-201ENST00000268704 MYCBP2O75592 4640 aa8.87□□□□□ -0.99
SPG7-201ENST00000268704 TNXBP22105 4242 aa8.83□□□□□ -1
SPG7-201ENST00000268704 A0A0D9SG42 100 aa8.82□□□□□ -1
SPG7-201ENST00000268704 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
SPG7-201ENST00000268704 KRTAP13-4Q3LI77 160 aa8.79□□□□□ -1
SPG7-201ENST00000268704 SPINT4Q6UDR6 99 aa8.79□□□□□ -1
SPG7-201ENST00000268704 C10orf95Q9H7T3 257 aa8.78□□□□□ -1
SPG7-201ENST00000268704 K7ERS5 55 aa8.78□□□□□ -1
SPG7-201ENST00000268704 KRTAP10-6P60371 365 aaPredicted RBP8.78□□□□□ -1
SPG7-201ENST00000268704 KRTAP10-8P60410 259 aa8.77□□□□□ -1.01
SPG7-201ENST00000268704 KIAA1109Q2LD37 5005 aa8.7□□□□□ -1.02
SPG7-201ENST00000268704 KRTAP3-2Q9BYR7 98 aa8.7□□□□□ -1.02
SPG7-201ENST00000268704 NDUFAF8A1L188 74 aa8.67□□□□□ -1.02
SPG7-201ENST00000268704 RPL37P61927 97 aaKnown RBP8.67□□□□□ -1.02
SPG7-201ENST00000268704 TPRXLQ17RH7 258 aa8.67□□□□□ -1.02
SPG7-201ENST00000268704 XP32Q5T750 250 aa8.66□□□□□ -1.02
SPG7-201ENST00000268704 S4R3F8 94 aa8.65□□□□□ -1.02
SPG7-201ENST00000268704 LPAP08519 4548 aa8.65□□□□□ -1.03
SPG7-201ENST00000268704 BIRC6Q9NR09 4857 aa8.63□□□□□ -1.03
SPG7-201ENST00000268704 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
SPG7-201ENST00000268704 RYR1P21817 5038 aa8.6□□□□□ -1.03
SPG7-201ENST00000268704 Q5VSD8 79 aa8.58□□□□□ -1.04
SPG7-201ENST00000268704 KRTAP12-2P59991 146 aa8.5□□□□□ -1.05
SPG7-201ENST00000268704 KRTAP4-5Q9BYR2 181 aa8.49□□□□□ -1.05
SPG7-201ENST00000268704 A0A0A0MQY5 61 aa8.48□□□□□ -1.05
SPG7-201ENST00000268704 LRP2P98164 4655 aa8.48□□□□□ -1.05
SPG7-201ENST00000268704 HERC2O95714 4834 aa8.44□□□□□ -1.06
SPG7-201ENST00000268704 KRTAP12-1P59990 96 aa8.38□□□□□ -1.07
SPG7-201ENST00000268704 KRTAP15-1Q3LI76 137 aa8.38□□□□□ -1.07
SPG7-201ENST00000268704 MT1HL1P0DM35 61 aa8.37□□□□□ -1.07
SPG7-201ENST00000268704 ABCA13Q86UQ4 5058 aa8.34□□□□□ -1.08
SPG7-201ENST00000268704 PCLOQ9Y6V0 5065 aa8.27□□□□□ -1.09
SPG7-201ENST00000268704 M0QZ58 72 aa8.18□□□□□ -1.1
SPG7-201ENST00000268704 J3QL48 77 aa8.1□□□□□ -1.11
SPG7-201ENST00000268704 R4GN34 69 aa8.06□□□□□ -1.12
SPG7-201ENST00000268704 LORP23490 312 aaPredicted RBP8.05□□□□□ -1.12
SPG7-201ENST00000268704 MUC17Q685J3 4493 aa8.02□□□□□ -1.13
SPG7-201ENST00000268704 HERC1Q15751 4861 aa7.97□□□□□ -1.13
SPG7-201ENST00000268704 KRTAP4-1Q9BYQ7 146 aa7.93□□□□□ -1.14
SPG7-201ENST00000268704 LUZP6Q538Z0 58 aa7.89□□□□□ -1.15
SPG7-201ENST00000268704 MUC2Q02817 5179 aa7.85□□□□□ -1.15
SPG7-201ENST00000268704 PLAC4Q8WY50 150 aa7.85□□□□□ -1.15
SPG7-201ENST00000268704 SEC61BP60468 96 aaKnown RBP7.83□□□□□ -1.16
SPG7-201ENST00000268704 KRTAP19-2Q3LHN2 52 aa7.73□□□□□ -1.17
SPG7-201ENST00000268704 HMCN2Q8NDA2 5059 aa7.72□□□□□ -1.17
SPG7-201ENST00000268704 CAMK2N1Q7Z7J9 78 aa7.69□□□□□ -1.18
SPG7-201ENST00000268704 FLGP20930 4061 aaPredicted RBP7.55□□□□□ -1.2
SPG7-201ENST00000268704 UBR4Q5T4S7 5183 aa7.52□□□□□ -1.21
SPG7-201ENST00000268704 PP632Q6XCG6 107 aa7.5□□□□□ -1.21
SPG7-201ENST00000268704 FAT4Q6V0I7 4981 aa7.45□□□□□ -1.22
SPG7-201ENST00000268704 RNF213Q63HN8 5207 aa7.39□□□□□ -1.23
SPG7-201ENST00000268704 TNP1P09430 55 aa7.36□□□□□ -1.23
SPG7-201ENST00000268704 LCE2CQ5TA81 110 aa7.2□□□□□ -1.26
SPG7-201ENST00000268704 KRTAP19-1Q8IUB9 90 aa7.16□□□□□ -1.26
SPG7-201ENST00000268704 KRTAP23-1A1A580 65 aa7.14□□□□□ -1.27
SPG7-201ENST00000268704 SPRR2GQ9BYE4 73 aa7.12□□□□□ -1.27
SPG7-201ENST00000268704 SPRR5A0A1B0GTR4 108 aa7.12□□□□□ -1.27
SPG7-201ENST00000268704 M0R2T5 61 aa7.09□□□□□ -1.27
SPG7-201ENST00000268704 LCE3AQ5TA76 89 aa7.05□□□□□ -1.28
SPG7-201ENST00000268704 MT1HP80294 61 aa6.99□□□□□ -1.29
SPG7-201ENST00000268704 MT1FP04733 61 aa6.98□□□□□ -1.29
SPG7-201ENST00000268704 KRTAP10-10P60014 251 aa6.96□□□□□ -1.3
SPG7-201ENST00000268704 MT2AP02795 61 aa6.94□□□□□ -1.3
SPG7-201ENST00000268704 LCE2AQ5TA79 106 aaPredicted RBP6.86□□□□□ -1.31
SPG7-201ENST00000268704 KRTAP9-8Q9BYQ0 159 aa6.86□□□□□ -1.31
SPG7-201ENST00000268704 KRTAP10-5P60370 271 aa6.77□□□□□ -1.33
SPG7-201ENST00000268704 MT1BP07438 61 aa6.76□□□□□ -1.33
SPG7-201ENST00000268704 MT1XP80297 61 aa6.76□□□□□ -1.33
SPG7-201ENST00000268704 KRTAP8-1Q8IUC2 63 aa6.75□□□□□ -1.33
SPG7-201ENST00000268704 KRTAP19-8Q3LI54 63 aa6.75□□□□□ -1.33
SPG7-201ENST00000268704 PRO2289Q9P1D8 64 aa6.73□□□□□ -1.33
SPG7-201ENST00000268704 KRTAP10-12P60413 245 aa6.66□□□□□ -1.34
SPG7-201ENST00000268704 KRTAP12-3P60328 96 aa6.65□□□□□ -1.34
SPG7-201ENST00000268704 KRTAP10-7P60409 375 aaPredicted RBP6.65□□□□□ -1.35
SPG7-201ENST00000268704 KMT2DO14686 5537 aa6.57□□□□□ -1.36
SPG7-201ENST00000268704 USH2AO75445 5202 aa6.55□□□□□ -1.36
SPG7-201ENST00000268704 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
SPG7-201ENST00000268704 INE1O15225 51 aa6.45□□□□□ -1.38
SPG7-201ENST00000268704 KRTAP19-5Q3LI72 72 aa6.36□□□□□ -1.39
SPG7-201ENST00000268704 KRTAP9-2Q9BYQ4 174 aa6.34□□□□□ -1.39
SPG7-201ENST00000268704 LCE2DQ5TA82 110 aaPredicted RBP6.32□□□□□ -1.4
SPG7-201ENST00000268704 LCE2BO14633 110 aa6.32□□□□□ -1.4
SPG7-201ENST00000268704 FSIP2Q5CZC0 6907 aa6.31□□□□□ -1.4
SPG7-201ENST00000268704 LCE3CQ5T5A8 94 aa6.26□□□□□ -1.41
SPG7-201ENST00000268704 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
SPG7-201ENST00000268704 KRTAP4-8Q9BYQ9 185 aa6.25□□□□□ -1.41
SPG7-201ENST00000268704 KRTAP9-6A8MVA2 160 aa6.16□□□□□ -1.42
SPG7-201ENST00000268704 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
SPG7-201ENST00000268704 CRCT1Q9UGL9 99 aa6.05□□□□□ -1.44
SPG7-201ENST00000268704 SSPOA2VEC9 5147 aa6.04□□□□□ -1.44
SPG7-201ENST00000268704 KRTAP19-7Q3SYF9 63 aa6.02□□□□□ -1.45
SPG7-201ENST00000268704 KRTAP9-6A0A140TA67 174 aa5.97□□□□□ -1.45
SPG7-201ENST00000268704 KRTAP19-6Q3LI70 58 aa5.9□□□□□ -1.46
SPG7-201ENST00000268704 FCGBPQ9Y6R7 5405 aaPredicted RBP5.87□□□□□ -1.47
SPG7-201ENST00000268704 KRTAP2-3P0C7H8 128 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 232.4 ms