RNA–Protein interactions for RNA: ENST00000266542.8

C1RL-201, Transcript of complement C1r subcomponent like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1RL, Length 3,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-201ENST00000266542 FAT1Q14517 4588 aa6.67□□□□□ -1.34
C1RL-201ENST00000266542 KRTAP21-3Q3LHN1 58 aa6.67□□□□□ -1.34
C1RL-201ENST00000266542 P0C880 135 aa6.66□□□□□ -1.34
C1RL-201ENST00000266542 TPRXLQ17RH7 258 aa6.64□□□□□ -1.35
C1RL-201ENST00000266542 S4R3F8 94 aa6.61□□□□□ -1.35
C1RL-201ENST00000266542 FAT3Q8TDW7 4589 aa6.61□□□□□ -1.35
C1RL-201ENST00000266542 A0A0D9SG42 100 aa6.6□□□□□ -1.35
C1RL-201ENST00000266542 KRTAP10-8P60410 259 aa6.58□□□□□ -1.36
C1RL-201ENST00000266542 TNXBP22105 4242 aa6.57□□□□□ -1.36
C1RL-201ENST00000266542 LRP1Q07954 4544 aaKnown RBP6.56□□□□□ -1.36
C1RL-201ENST00000266542 XP32Q5T750 250 aa6.54□□□□□ -1.36
C1RL-201ENST00000266542 DMBT1Q9UGM3 2413 aaPredicted RBP6.52□□□□□ -1.37
C1RL-201ENST00000266542 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
C1RL-201ENST00000266542 SPINT4Q6UDR6 99 aa6.51□□□□□ -1.37
C1RL-201ENST00000266542 HSPG2P98160 4391 aa6.5□□□□□ -1.37
C1RL-201ENST00000266542 C10orf95Q9H7T3 257 aa6.49□□□□□ -1.37
C1RL-201ENST00000266542 KRTAP15-1Q3LI76 137 aa6.48□□□□□ -1.37
C1RL-201ENST00000266542 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
C1RL-201ENST00000266542 M0QZ58 72 aa6.41□□□□□ -1.38
C1RL-201ENST00000266542 RYR2Q92736 4967 aa6.34□□□□□ -1.39
C1RL-201ENST00000266542 Q5VSD8 79 aa6.34□□□□□ -1.4
C1RL-201ENST00000266542 NDUFAF8A1L188 74 aa6.31□□□□□ -1.4
C1RL-201ENST00000266542 MYCBP2O75592 4640 aa6.3□□□□□ -1.4
C1RL-201ENST00000266542 MT1HL1P0DM35 61 aa6.27□□□□□ -1.41
C1RL-201ENST00000266542 KRTAP17-1Q9BYP8 105 aa6.19□□□□□ -1.42
C1RL-201ENST00000266542 LPAP08519 4548 aa6.18□□□□□ -1.42
C1RL-201ENST00000266542 KMT2CQ8NEZ4 4911 aaKnown RBP6.18□□□□□ -1.42
C1RL-201ENST00000266542 RYR1P21817 5038 aa6.16□□□□□ -1.42
C1RL-201ENST00000266542 R4GN34 69 aa6.13□□□□□ -1.43
C1RL-201ENST00000266542 LRP2P98164 4655 aa6.12□□□□□ -1.43
C1RL-201ENST00000266542 PLAC4Q8WY50 150 aa6.06□□□□□ -1.44
C1RL-201ENST00000266542 LORP23490 312 aaPredicted RBP6.02□□□□□ -1.45
C1RL-201ENST00000266542 PP632Q6XCG6 107 aa5.98□□□□□ -1.45
C1RL-201ENST00000266542 RYR3Q15413 4870 aa5.96□□□□□ -1.46
C1RL-201ENST00000266542 SEC61BP60468 96 aaKnown RBP5.96□□□□□ -1.46
C1RL-201ENST00000266542 KIAA1109Q2LD37 5005 aa5.95□□□□□ -1.46
C1RL-201ENST00000266542 MUC17Q685J3 4493 aa5.95□□□□□ -1.46
C1RL-201ENST00000266542 KRTAP19-2Q3LHN2 52 aa5.89□□□□□ -1.47
C1RL-201ENST00000266542 KRTAP4-1Q9BYQ7 146 aa5.88□□□□□ -1.47
C1RL-201ENST00000266542 ABCA13Q86UQ4 5058 aa5.83□□□□□ -1.48
C1RL-201ENST00000266542 CAMK2N1Q7Z7J9 78 aa5.83□□□□□ -1.48
C1RL-201ENST00000266542 LUZP6Q538Z0 58 aa5.81□□□□□ -1.48
C1RL-201ENST00000266542 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
C1RL-201ENST00000266542 KRTAP4-5Q9BYR2 181 aa5.75□□□□□ -1.49
C1RL-201ENST00000266542 SPRR5A0A1B0GTR4 108 aa5.7□□□□□ -1.5
C1RL-201ENST00000266542 TNP1P09430 55 aa5.69□□□□□ -1.5
C1RL-201ENST00000266542 A0A0A0MQY5 61 aa5.67□□□□□ -1.5
C1RL-201ENST00000266542 EPPK1P58107 5090 aaKnown RBP5.67□□□□□ -1.5
C1RL-201ENST00000266542 FLGP20930 4061 aaPredicted RBP5.65□□□□□ -1.51
C1RL-201ENST00000266542 HERC1Q15751 4861 aa5.61□□□□□ -1.51
C1RL-201ENST00000266542 J3QL48 77 aa5.58□□□□□ -1.52
C1RL-201ENST00000266542 SPRR2GQ9BYE4 73 aa5.49□□□□□ -1.53
C1RL-201ENST00000266542 BIRC6Q9NR09 4857 aa5.49□□□□□ -1.53
C1RL-201ENST00000266542 HERC2O95714 4834 aa5.43□□□□□ -1.54
C1RL-201ENST00000266542 KRTAP19-1Q8IUB9 90 aa5.42□□□□□ -1.54
C1RL-201ENST00000266542 MUC2Q02817 5179 aa5.42□□□□□ -1.54
C1RL-201ENST00000266542 LCE2CQ5TA81 110 aa5.41□□□□□ -1.54
C1RL-201ENST00000266542 PCLOQ9Y6V0 5065 aa5.37□□□□□ -1.55
C1RL-201ENST00000266542 LCE3AQ5TA76 89 aa5.35□□□□□ -1.55
C1RL-201ENST00000266542 KRTAP8-1Q8IUC2 63 aa5.29□□□□□ -1.56
C1RL-201ENST00000266542 KRTAP19-8Q3LI54 63 aa5.22□□□□□ -1.57
C1RL-201ENST00000266542 PRO2289Q9P1D8 64 aa5.21□□□□□ -1.58
C1RL-201ENST00000266542 MT1HP80294 61 aa5.21□□□□□ -1.58
C1RL-201ENST00000266542 HMCN2Q8NDA2 5059 aa5.2□□□□□ -1.58
C1RL-201ENST00000266542 MT2AP02795 61 aa5.19□□□□□ -1.58
C1RL-201ENST00000266542 MT1FP04733 61 aa5.19□□□□□ -1.58
C1RL-201ENST00000266542 INE1O15225 51 aa5.17□□□□□ -1.58
C1RL-201ENST00000266542 M0R2T5 61 aa5.16□□□□□ -1.58
C1RL-201ENST00000266542 FAT4Q6V0I7 4981 aa5.16□□□□□ -1.58
C1RL-201ENST00000266542 KRTAP10-10P60014 251 aa5.15□□□□□ -1.58
C1RL-201ENST00000266542 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.58
C1RL-201ENST00000266542 KRTAP10-5P60370 271 aa5.14□□□□□ -1.59
C1RL-201ENST00000266542 MT1XP80297 61 aa5.12□□□□□ -1.59
C1RL-201ENST00000266542 MT1BP07438 61 aa5.1□□□□□ -1.59
C1RL-201ENST00000266542 KRTAP12-3P60328 96 aa5.1□□□□□ -1.59
C1RL-201ENST00000266542 KRTAP10-12P60413 245 aa5.06□□□□□ -1.6
C1RL-201ENST00000266542 UBR4Q5T4S7 5183 aa5.03□□□□□ -1.6
C1RL-201ENST00000266542 RNF213Q63HN8 5207 aa4.97□□□□□ -1.61
C1RL-201ENST00000266542 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.61
C1RL-201ENST00000266542 KRTAP9-3Q9BYQ3 159 aa4.93□□□□□ -1.62
C1RL-201ENST00000266542 LCE3CQ5T5A8 94 aa4.84□□□□□ -1.64
C1RL-201ENST00000266542 KRTAP19-5Q3LI72 72 aa4.8□□□□□ -1.64
C1RL-201ENST00000266542 LCE2DQ5TA82 110 aaPredicted RBP4.67□□□□□ -1.66
C1RL-201ENST00000266542 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
C1RL-201ENST00000266542 LCE2BO14633 110 aa4.67□□□□□ -1.66
C1RL-201ENST00000266542 KRTAP2-3P0C7H8 128 aa4.64□□□□□ -1.67
C1RL-201ENST00000266542 KRTAP2-4Q9BYR9 128 aa4.64□□□□□ -1.67
C1RL-201ENST00000266542 KRTAP2-1Q9BYU5 128 aa4.64□□□□□ -1.67
C1RL-201ENST00000266542 KRTAP19-4Q3LI73 84 aa4.62□□□□□ -1.67
C1RL-201ENST00000266542 KRTAP4-8A0A0G2JLE6 195 aa4.57□□□□□ -1.68
C1RL-201ENST00000266542 KRTAP4-8Q9BYQ9 185 aa4.57□□□□□ -1.68
C1RL-201ENST00000266542 KRTAP19-7Q3SYF9 63 aa4.57□□□□□ -1.68
C1RL-201ENST00000266542 KMT2DO14686 5537 aa4.47□□□□□ -1.69
C1RL-201ENST00000266542 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
C1RL-201ENST00000266542 MT1LQ93083 61 aa4.45□□□□□ -1.7
C1RL-201ENST00000266542 LCE2AQ5TA79 106 aaPredicted RBP4.43□□□□□ -1.7
C1RL-201ENST00000266542 MT1EP04732 61 aa4.41□□□□□ -1.7
C1RL-201ENST00000266542 USH2AO75445 5202 aa4.4□□□□□ -1.71
C1RL-201ENST00000266542 SSPOA2VEC9 5147 aa4.17□□□□□ -1.74
C1RL-201ENST00000266542 LOC100996750A0A140TA64 210 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms