RNA–Protein interactions for RNA: ENST00000265956.8

GAPVD1-201, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-201ENST00000265956 CSAG1Q6PB30 78 aa3.92□□□□□ -1.78
GAPVD1-201ENST00000265956 KIAA1109Q2LD37 5005 aa3.92□□□□□ -1.78
GAPVD1-201ENST00000265956 H1FX-AS1Q4G0G2 97 aa3.92□□□□□ -1.78
GAPVD1-201ENST00000265956 KRTAP17-1Q9BYP8 105 aa3.91□□□□□ -1.78
GAPVD1-201ENST00000265956 KRTAP10-8P60410 259 aa3.91□□□□□ -1.78
GAPVD1-201ENST00000265956 XP32Q5T750 250 aa3.88□□□□□ -1.79
GAPVD1-201ENST00000265956 CRIPTQ9P021 101 aa3.88□□□□□ -1.79
GAPVD1-201ENST00000265956 LPAP08519 4548 aa3.87□□□□□ -1.79
GAPVD1-201ENST00000265956 RPL37P61927 97 aaKnown RBP3.87□□□□□ -1.79
GAPVD1-201ENST00000265956 A0A0D9SG42 100 aa3.87□□□□□ -1.79
GAPVD1-201ENST00000265956 RYR1P21817 5038 aa3.86□□□□□ -1.79
GAPVD1-201ENST00000265956 LINC01554Q52M75 96 aa3.85□□□□□ -1.79
GAPVD1-201ENST00000265956 KRTAP3-3Q9BYR6 98 aa3.85□□□□□ -1.79
GAPVD1-201ENST00000265956 LRP2P98164 4655 aa3.84□□□□□ -1.79
GAPVD1-201ENST00000265956 S4R3F8 94 aa3.83□□□□□ -1.8
GAPVD1-201ENST00000265956 KRTAP13-4Q3LI77 160 aa3.82□□□□□ -1.8
GAPVD1-201ENST00000265956 K7ERS5 55 aa3.81□□□□□ -1.8
GAPVD1-201ENST00000265956 KRTAP10-6P60371 365 aaPredicted RBP3.81□□□□□ -1.8
GAPVD1-201ENST00000265956 KRTAP3-2Q9BYR7 98 aa3.81□□□□□ -1.8
GAPVD1-201ENST00000265956 EPPK1P58107 5090 aaKnown RBP3.81□□□□□ -1.8
GAPVD1-201ENST00000265956 MT1HL1P0DM35 61 aa3.81□□□□□ -1.8
GAPVD1-201ENST00000265956 ABCA13Q86UQ4 5058 aa3.81□□□□□ -1.8
GAPVD1-201ENST00000265956 P0C880 135 aa3.8□□□□□ -1.8
GAPVD1-201ENST00000265956 LCE2DQ5TA82 110 aaPredicted RBP3.78□□□□□ -1.8
GAPVD1-201ENST00000265956 H3BS24 57 aa3.77□□□□□ -1.81
GAPVD1-201ENST00000265956 KRTAP25-1Q3LHN0 102 aa3.76□□□□□ -1.81
GAPVD1-201ENST00000265956 KRTAP4-5Q9BYR2 181 aa3.74□□□□□ -1.81
GAPVD1-201ENST00000265956 SPINT4Q6UDR6 99 aa3.72□□□□□ -1.81
GAPVD1-201ENST00000265956 ROMO1P60602 79 aa3.71□□□□□ -1.82
GAPVD1-201ENST00000265956 KRTAP12-2P59991 146 aa3.7□□□□□ -1.82
GAPVD1-201ENST00000265956 TPRXLQ17RH7 258 aa3.69□□□□□ -1.82
GAPVD1-201ENST00000265956 C10orf95Q9H7T3 257 aa3.69□□□□□ -1.82
GAPVD1-201ENST00000265956 MUC2Q02817 5179 aa3.65□□□□□ -1.83
GAPVD1-201ENST00000265956 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
GAPVD1-201ENST00000265956 BIRC6Q9NR09 4857 aa3.64□□□□□ -1.83
GAPVD1-201ENST00000265956 KRTAP12-1P59990 96 aa3.64□□□□□ -1.83
GAPVD1-201ENST00000265956 M0QZ58 72 aa3.62□□□□□ -1.83
GAPVD1-201ENST00000265956 R4GN34 69 aa3.59□□□□□ -1.83
GAPVD1-201ENST00000265956 KRTAP4-1Q9BYQ7 146 aa3.59□□□□□ -1.83
GAPVD1-201ENST00000265956 HERC2O95714 4834 aa3.59□□□□□ -1.84
GAPVD1-201ENST00000265956 LORP23490 312 aaPredicted RBP3.57□□□□□ -1.84
GAPVD1-201ENST00000265956 SEC61BP60468 96 aaKnown RBP3.57□□□□□ -1.84
GAPVD1-201ENST00000265956 MUC17Q685J3 4493 aa3.55□□□□□ -1.84
GAPVD1-201ENST00000265956 HERC1Q15751 4861 aa3.49□□□□□ -1.85
GAPVD1-201ENST00000265956 PCLOQ9Y6V0 5065 aa3.45□□□□□ -1.86
GAPVD1-201ENST00000265956 KRTAP19-2Q3LHN2 52 aa3.44□□□□□ -1.86
GAPVD1-201ENST00000265956 LCE2CQ5TA81 110 aa3.44□□□□□ -1.86
GAPVD1-201ENST00000265956 FAT4Q6V0I7 4981 aa3.43□□□□□ -1.86
GAPVD1-201ENST00000265956 LCE2BO14633 110 aa3.43□□□□□ -1.86
GAPVD1-201ENST00000265956 CAMK2N1Q7Z7J9 78 aa3.43□□□□□ -1.86
GAPVD1-201ENST00000265956 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
GAPVD1-201ENST00000265956 KRTAP15-1Q3LI76 137 aa3.41□□□□□ -1.86
GAPVD1-201ENST00000265956 RNF213Q63HN8 5207 aa3.41□□□□□ -1.86
GAPVD1-201ENST00000265956 FLGP20930 4061 aaPredicted RBP3.38□□□□□ -1.87
GAPVD1-201ENST00000265956 LCE2AQ5TA79 106 aaPredicted RBP3.37□□□□□ -1.87
GAPVD1-201ENST00000265956 HMCN2Q8NDA2 5059 aa3.34□□□□□ -1.87
GAPVD1-201ENST00000265956 UBR4Q5T4S7 5183 aa3.32□□□□□ -1.88
GAPVD1-201ENST00000265956 M0R2T5 61 aa3.32□□□□□ -1.88
GAPVD1-201ENST00000265956 PLAC4Q8WY50 150 aa3.31□□□□□ -1.88
GAPVD1-201ENST00000265956 TNP1P09430 55 aa3.24□□□□□ -1.89
GAPVD1-201ENST00000265956 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
GAPVD1-201ENST00000265956 KRTAP10-10P60014 251 aa3.2□□□□□ -1.9
GAPVD1-201ENST00000265956 MT1HP80294 61 aa3.2□□□□□ -1.9
GAPVD1-201ENST00000265956 KRTAP19-1Q8IUB9 90 aa3.2□□□□□ -1.9
GAPVD1-201ENST00000265956 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
GAPVD1-201ENST00000265956 MT1FP04733 61 aa3.16□□□□□ -1.9
GAPVD1-201ENST00000265956 SPRR2GQ9BYE4 73 aa3.16□□□□□ -1.9
GAPVD1-201ENST00000265956 MT2AP02795 61 aa3.15□□□□□ -1.91
GAPVD1-201ENST00000265956 KRTAP9-8Q9BYQ0 159 aa3.11□□□□□ -1.91
GAPVD1-201ENST00000265956 LCE3AQ5TA76 89 aa3.1□□□□□ -1.91
GAPVD1-201ENST00000265956 KRTAP23-1A1A580 65 aa3.06□□□□□ -1.92
GAPVD1-201ENST00000265956 USH2AO75445 5202 aa3.04□□□□□ -1.92
GAPVD1-201ENST00000265956 MT1BP07438 61 aa3.03□□□□□ -1.92
GAPVD1-201ENST00000265956 KRTAP10-5P60370 271 aa3.02□□□□□ -1.93
GAPVD1-201ENST00000265956 MT1XP80297 61 aa3.01□□□□□ -1.93
GAPVD1-201ENST00000265956 KRTAP19-8Q3LI54 63 aa3.01□□□□□ -1.93
GAPVD1-201ENST00000265956 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
GAPVD1-201ENST00000265956 KMT2DO14686 5537 aa2.98□□□□□ -1.93
GAPVD1-201ENST00000265956 KRTAP10-7P60409 375 aaPredicted RBP2.97□□□□□ -1.93
GAPVD1-201ENST00000265956 KRTAP9-3Q9BYQ3 159 aa2.97□□□□□ -1.93
GAPVD1-201ENST00000265956 KRTAP10-12P60413 245 aa2.96□□□□□ -1.93
GAPVD1-201ENST00000265956 KRTAP8-1Q8IUC2 63 aa2.94□□□□□ -1.94
GAPVD1-201ENST00000265956 KRTAP12-3P60328 96 aa2.94□□□□□ -1.94
GAPVD1-201ENST00000265956 KRTAP9-6A0A140TA67 174 aa2.89□□□□□ -1.95
GAPVD1-201ENST00000265956 PRO2289Q9P1D8 64 aa2.88□□□□□ -1.95
GAPVD1-201ENST00000265956 FSIP2Q5CZC0 6907 aa2.87□□□□□ -1.95
GAPVD1-201ENST00000265956 KRTAP4-8A0A0G2JLE6 195 aa2.84□□□□□ -1.96
GAPVD1-201ENST00000265956 KRTAP19-5Q3LI72 72 aa2.84□□□□□ -1.96
GAPVD1-201ENST00000265956 KRTAP4-8Q9BYQ9 185 aa2.84□□□□□ -1.96
GAPVD1-201ENST00000265956 LCE3CQ5T5A8 94 aa2.75□□□□□ -1.97
GAPVD1-201ENST00000265956 KRTAP4-7Q9BYR0 210 aa2.73□□□□□ -1.97
GAPVD1-201ENST00000265956 KRTAP9-2Q9BYQ4 174 aa2.72□□□□□ -1.97
GAPVD1-201ENST00000265956 LOC100996750A0A140TA64 210 aa2.7□□□□□ -1.98
GAPVD1-201ENST00000265956 KRTAP4-6Q9BYQ5 205 aa2.7□□□□□ -1.98
GAPVD1-201ENST00000265956 SSPOA2VEC9 5147 aa2.69□□□□□ -1.98
GAPVD1-201ENST00000265956 KRTAP9-6A8MVA2 160 aa2.68□□□□□ -1.98
GAPVD1-201ENST00000265956 KRTAP19-7Q3SYF9 63 aa2.68□□□□□ -1.98
GAPVD1-201ENST00000265956 MUC12Q9UKN1 5478 aa2.62□□□□□ -1.99
GAPVD1-201ENST00000265956 INE1O15225 51 aa2.61□□□□□ -1.99
GAPVD1-201ENST00000265956 FCGBPQ9Y6R7 5405 aaPredicted RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms