RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 LCA10Q71F78 164 aa11.15□□□□□ -0.62
UFD1-201ENST00000263202 RPS28P62857 69 aaKnown RBP11.12□□□□□ -0.63
UFD1-201ENST00000263202 KRTAP3-3Q9BYR6 98 aa11.11□□□□□ -0.63
UFD1-201ENST00000263202 FLGP20930 4061 aaPredicted RBP11.01□□□□□ -0.65
UFD1-201ENST00000263202 SPTSSBQ8NFR3 76 aa11□□□□□ -0.65
UFD1-201ENST00000263202 FAT4Q6V0I7 4981 aa10.97□□□□□ -0.65
UFD1-201ENST00000263202 MT1HP80294 61 aa10.96□□□□□ -0.65
UFD1-201ENST00000263202 CSAG1Q6PB30 78 aa10.94□□□□□ -0.66
UFD1-201ENST00000263202 SMIM26A0A096LP01 95 aa10.91□□□□□ -0.66
UFD1-201ENST00000263202 M0R2T5 61 aa10.81□□□□□ -0.68
UFD1-201ENST00000263202 LINC01558Q9Y6Z2 57 aa10.77□□□□□ -0.68
UFD1-201ENST00000263202 Q1T7F1 81 aa10.76□□□□□ -0.69
UFD1-201ENST00000263202 V9GYY9 64 aa10.72□□□□□ -0.69
UFD1-201ENST00000263202 LCE2AQ5TA79 106 aaPredicted RBP10.7□□□□□ -0.7
UFD1-201ENST00000263202 H0YAA0 97 aa10.7□□□□□ -0.7
UFD1-201ENST00000263202 A0A1B0GU69 56 aa10.67□□□□□ -0.7
UFD1-201ENST00000263202 ADM2Q7Z4H4 148 aa10.65□□□□□ -0.7
UFD1-201ENST00000263202 KRTAP3-2Q9BYR7 98 aa10.65□□□□□ -0.7
UFD1-201ENST00000263202 SEC61GP60059 68 aa10.65□□□□□ -0.71
UFD1-201ENST00000263202 PRR15LQ9BU68 103 aa10.62□□□□□ -0.71
UFD1-201ENST00000263202 KRTAP10-6P60371 365 aaPredicted RBP10.61□□□□□ -0.71
UFD1-201ENST00000263202 PSPHP1O15172 72 aa10.58□□□□□ -0.72
UFD1-201ENST00000263202 P0C880 135 aa10.58□□□□□ -0.72
UFD1-201ENST00000263202 LORP23490 312 aaPredicted RBP10.54□□□□□ -0.72
UFD1-201ENST00000263202 KRTAP9-8Q9BYQ0 159 aa10.54□□□□□ -0.72
UFD1-201ENST00000263202 Q5VV11 94 aa10.49□□□□□ -0.73
UFD1-201ENST00000263202 MT2AP02795 61 aa10.48□□□□□ -0.73
UFD1-201ENST00000263202 A0A1B0GU33 70 aa10.42□□□□□ -0.74
UFD1-201ENST00000263202 MT1FP04733 61 aa10.42□□□□□ -0.74
UFD1-201ENST00000263202 KRTAP10-10P60014 251 aa10.37□□□□□ -0.75
UFD1-201ENST00000263202 UQCR11O14957 56 aa10.3□□□□□ -0.76
UFD1-201ENST00000263202 KRTAP13-4Q3LI77 160 aa10.3□□□□□ -0.76
UFD1-201ENST00000263202 CRIPTQ9P021 101 aa10.3□□□□□ -0.76
UFD1-201ENST00000263202 R4GN34 69 aa10.28□□□□□ -0.76
UFD1-201ENST00000263202 M0QZ58 72 aa10.26□□□□□ -0.77
UFD1-201ENST00000263202 SPATA8Q6RVD6 105 aa10.26□□□□□ -0.77
UFD1-201ENST00000263202 A6NED7 52 aa10.25□□□□□ -0.77
UFD1-201ENST00000263202 MIR22HGQ0VDD5 57 aa10.17□□□□□ -0.78
UFD1-201ENST00000263202 KRTAP9-3Q9BYQ3 159 aa10.17□□□□□ -0.78
UFD1-201ENST00000263202 KRTAP19-1Q8IUB9 90 aa10.16□□□□□ -0.78
UFD1-201ENST00000263202 SPRR2GQ9BYE4 73 aa10.16□□□□□ -0.78
UFD1-201ENST00000263202 A8MU10 97 aa10.09□□□□□ -0.79
UFD1-201ENST00000263202 LINC01554Q52M75 96 aa10.08□□□□□ -0.8
UFD1-201ENST00000263202 A0A0D9SG42 100 aa10.06□□□□□ -0.8
UFD1-201ENST00000263202 CDC42SE1Q9NRR8 79 aa10.04□□□□□ -0.8
UFD1-201ENST00000263202 LCE2DQ5TA82 110 aaPredicted RBP10.03□□□□□ -0.8
UFD1-201ENST00000263202 BRK1Q8WUW1 75 aa9.97□□□□□ -0.81
UFD1-201ENST00000263202 KRTAP19-8Q3LI54 63 aa9.93□□□□□ -0.82
UFD1-201ENST00000263202 LCE2BO14633 110 aa9.92□□□□□ -0.82
UFD1-201ENST00000263202 A6NN06 94 aa9.9□□□□□ -0.82
UFD1-201ENST00000263202 KRTAP12-1P59990 96 aa9.89□□□□□ -0.83
UFD1-201ENST00000263202 KRTAP12-2P59991 146 aa9.85□□□□□ -0.83
UFD1-201ENST00000263202 SPINT4Q6UDR6 99 aa9.84□□□□□ -0.83
UFD1-201ENST00000263202 MT1BP07438 61 aa9.82□□□□□ -0.84
UFD1-201ENST00000263202 PLAC4Q8WY50 150 aa9.75□□□□□ -0.85
UFD1-201ENST00000263202 K7ERS5 55 aa9.72□□□□□ -0.85
UFD1-201ENST00000263202 PRO0628Q9UI54 55 aa9.63□□□□□ -0.87
UFD1-201ENST00000263202 USH2AO75445 5202 aa9.63□□□□□ -0.87
UFD1-201ENST00000263202 CAMK2N1Q7Z7J9 78 aa9.6□□□□□ -0.87
UFD1-201ENST00000263202 KRTAP9-2Q9BYQ4 174 aa9.52□□□□□ -0.89
UFD1-201ENST00000263202 MT1XP80297 61 aa9.45□□□□□ -0.9
UFD1-201ENST00000263202 KRTAP10-5P60370 271 aa9.43□□□□□ -0.9
UFD1-201ENST00000263202 PMAIP1Q13794 54 aa9.42□□□□□ -0.9
UFD1-201ENST00000263202 C10orf95Q9H7T3 257 aa9.37□□□□□ -0.91
UFD1-201ENST00000263202 KRTAP19-6Q3LI70 58 aa9.35□□□□□ -0.91
UFD1-201ENST00000263202 PRO2289Q9P1D8 64 aa9.35□□□□□ -0.91
UFD1-201ENST00000263202 SSPOA2VEC9 5147 aa9.34□□□□□ -0.91
UFD1-201ENST00000263202 FSIP2Q5CZC0 6907 aa9.31□□□□□ -0.92
UFD1-201ENST00000263202 ROMO1P60602 79 aa9.31□□□□□ -0.92
UFD1-201ENST00000263202 KRTAP9-6A0A140TA67 174 aa9.16□□□□□ -0.94
UFD1-201ENST00000263202 CRCT1Q9UGL9 99 aa9.15□□□□□ -0.94
UFD1-201ENST00000263202 TNP1P09430 55 aa9.1□□□□□ -0.95
UFD1-201ENST00000263202 KRTAP25-1Q3LHN0 102 aa9.07□□□□□ -0.96
UFD1-201ENST00000263202 KRTAP10-7P60409 375 aaPredicted RBP9.05□□□□□ -0.96
UFD1-201ENST00000263202 FCGBPQ9Y6R7 5405 aaPredicted RBP9.01□□□□□ -0.97
UFD1-201ENST00000263202 KRTAP10-12P60413 245 aa8.96□□□□□ -0.97
UFD1-201ENST00000263202 KTN1-AS1Q86SY8 53 aa8.95□□□□□ -0.98
UFD1-201ENST00000263202 PRAC1Q96KF2 57 aa8.86□□□□□ -0.99
UFD1-201ENST00000263202 LCE3AQ5TA76 89 aa8.78□□□□□ -1
UFD1-201ENST00000263202 KRTAP4-8A0A0G2JLE6 195 aa8.76□□□□□ -1.01
UFD1-201ENST00000263202 KRTAP23-1A1A580 65 aa8.76□□□□□ -1.01
UFD1-201ENST00000263202 KRTAP4-8Q9BYQ9 185 aa8.76□□□□□ -1.01
UFD1-201ENST00000263202 KMT2DO14686 5537 aa8.7□□□□□ -1.02
UFD1-201ENST00000263202 PP632Q6XCG6 107 aa8.7□□□□□ -1.02
UFD1-201ENST00000263202 KRTAP8-1Q8IUC2 63 aa8.59□□□□□ -1.03
UFD1-201ENST00000263202 MACF1Q9UPN3 7388 aaKnown RBP8.55□□□□□ -1.04
UFD1-201ENST00000263202 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.48□□□□□ -1.05
UFD1-201ENST00000263202 KRTAP19-5Q3LI72 72 aa8.48□□□□□ -1.05
UFD1-201ENST00000263202 SVIPQ8NHG7 77 aa8.44□□□□□ -1.06
UFD1-201ENST00000263202 KRTAP19-7Q3SYF9 63 aa8.43□□□□□ -1.06
UFD1-201ENST00000263202 KRTAP12-3P60328 96 aa8.43□□□□□ -1.06
UFD1-201ENST00000263202 MT1EP04732 61 aa8.29□□□□□ -1.08
UFD1-201ENST00000263202 SYNE2Q8WXH0 6885 aaKnown RBP8.29□□□□□ -1.08
UFD1-201ENST00000263202 SPRR2FQ96RM1 72 aa8.28□□□□□ -1.08
UFD1-201ENST00000263202 KRTAP5-9P26371 169 aa8.27□□□□□ -1.09
UFD1-201ENST00000263202 KRTAP9-7A8MTY7 169 aa8.24□□□□□ -1.09
UFD1-201ENST00000263202 KRTAP6-3Q3LI67 103 aa8.22□□□□□ -1.09
UFD1-201ENST00000263202 KRTAP15-1Q3LI76 137 aa8.2□□□□□ -1.1
UFD1-201ENST00000263202 MT1LQ93083 61 aa8.1□□□□□ -1.11
UFD1-201ENST00000263202 MUC12Q9UKN1 5478 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms