RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 RYR3Q15413 4870 aa9.01□□□□□ -0.97
TRAM1-201ENST00000262213 ROMO1P60602 79 aa9.01□□□□□ -0.97
TRAM1-201ENST00000262213 KRTAP13-4Q3LI77 160 aa9.01□□□□□ -0.97
TRAM1-201ENST00000262213 KRTAP10-6P60371 365 aaPredicted RBP8.99□□□□□ -0.97
TRAM1-201ENST00000262213 KRTAP3-3Q9BYR6 98 aa8.98□□□□□ -0.97
TRAM1-201ENST00000262213 RPL37P61927 97 aaKnown RBP8.96□□□□□ -0.97
TRAM1-201ENST00000262213 LRP1Q07954 4544 aaKnown RBP8.95□□□□□ -0.98
TRAM1-201ENST00000262213 KRTAP10-8P60410 259 aa8.95□□□□□ -0.98
TRAM1-201ENST00000262213 S4R3F8 94 aa8.9□□□□□ -0.98
TRAM1-201ENST00000262213 FAT3Q8TDW7 4589 aa8.9□□□□□ -0.98
TRAM1-201ENST00000262213 KRTAP3-2Q9BYR7 98 aa8.9□□□□□ -0.98
TRAM1-201ENST00000262213 HSPG2P98160 4391 aa8.9□□□□□ -0.98
TRAM1-201ENST00000262213 MYCBP2O75592 4640 aa8.89□□□□□ -0.99
TRAM1-201ENST00000262213 P0C880 135 aa8.88□□□□□ -0.99
TRAM1-201ENST00000262213 XP32Q5T750 250 aa8.84□□□□□ -0.99
TRAM1-201ENST00000262213 C10orf95Q9H7T3 257 aa8.84□□□□□ -0.99
TRAM1-201ENST00000262213 TPRXLQ17RH7 258 aa8.83□□□□□ -1
TRAM1-201ENST00000262213 TNXBP22105 4242 aa8.79□□□□□ -1
TRAM1-201ENST00000262213 SPINT4Q6UDR6 99 aa8.77□□□□□ -1.01
TRAM1-201ENST00000262213 RYR1P21817 5038 aa8.76□□□□□ -1.01
TRAM1-201ENST00000262213 Q5VSD8 79 aa8.75□□□□□ -1.01
TRAM1-201ENST00000262213 KRTAP12-2P59991 146 aa8.73□□□□□ -1.01
TRAM1-201ENST00000262213 EPPK1P58107 5090 aaKnown RBP8.67□□□□□ -1.02
TRAM1-201ENST00000262213 KRTAP17-1Q9BYP8 105 aa8.64□□□□□ -1.03
TRAM1-201ENST00000262213 KIAA1109Q2LD37 5005 aa8.61□□□□□ -1.03
TRAM1-201ENST00000262213 KRTAP12-1P59990 96 aa8.61□□□□□ -1.03
TRAM1-201ENST00000262213 LPAP08519 4548 aa8.6□□□□□ -1.03
TRAM1-201ENST00000262213 LRP2P98164 4655 aa8.51□□□□□ -1.05
TRAM1-201ENST00000262213 MT1HL1P0DM35 61 aa8.49□□□□□ -1.05
TRAM1-201ENST00000262213 NDUFAF8A1L188 74 aa8.45□□□□□ -1.06
TRAM1-201ENST00000262213 KRTAP15-1Q3LI76 137 aa8.44□□□□□ -1.06
TRAM1-201ENST00000262213 M0QZ58 72 aa8.44□□□□□ -1.06
TRAM1-201ENST00000262213 KRTAP4-5Q9BYR2 181 aa8.34□□□□□ -1.07
TRAM1-201ENST00000262213 R4GN34 69 aa8.32□□□□□ -1.08
TRAM1-201ENST00000262213 BIRC6Q9NR09 4857 aa8.3□□□□□ -1.08
TRAM1-201ENST00000262213 HERC2O95714 4834 aa8.24□□□□□ -1.09
TRAM1-201ENST00000262213 ABCA13Q86UQ4 5058 aa8.23□□□□□ -1.09
TRAM1-201ENST00000262213 LORP23490 312 aaPredicted RBP8.22□□□□□ -1.09
TRAM1-201ENST00000262213 KRTAP4-1Q9BYQ7 146 aa8.05□□□□□ -1.12
TRAM1-201ENST00000262213 SEC61BP60468 96 aaKnown RBP8.04□□□□□ -1.12
TRAM1-201ENST00000262213 PLAC4Q8WY50 150 aa8.03□□□□□ -1.12
TRAM1-201ENST00000262213 J3QL48 77 aa8.01□□□□□ -1.13
TRAM1-201ENST00000262213 MUC17Q685J3 4493 aa8□□□□□ -1.13
TRAM1-201ENST00000262213 CAMK2N1Q7Z7J9 78 aa7.97□□□□□ -1.13
TRAM1-201ENST00000262213 PCLOQ9Y6V0 5065 aa7.87□□□□□ -1.15
TRAM1-201ENST00000262213 KRTAP19-2Q3LHN2 52 aa7.8□□□□□ -1.16
TRAM1-201ENST00000262213 MUC2Q02817 5179 aa7.79□□□□□ -1.16
TRAM1-201ENST00000262213 PP632Q6XCG6 107 aa7.75□□□□□ -1.17
TRAM1-201ENST00000262213 HERC1Q15751 4861 aa7.73□□□□□ -1.17
TRAM1-201ENST00000262213 LUZP6Q538Z0 58 aa7.72□□□□□ -1.17
TRAM1-201ENST00000262213 HMCN2Q8NDA2 5059 aa7.69□□□□□ -1.18
TRAM1-201ENST00000262213 TNP1P09430 55 aa7.61□□□□□ -1.19
TRAM1-201ENST00000262213 FLGP20930 4061 aaPredicted RBP7.58□□□□□ -1.2
TRAM1-201ENST00000262213 A0A0A0MQY5 61 aa7.43□□□□□ -1.22
TRAM1-201ENST00000262213 FAT4Q6V0I7 4981 aa7.4□□□□□ -1.23
TRAM1-201ENST00000262213 KRTAP23-1A1A580 65 aa7.32□□□□□ -1.24
TRAM1-201ENST00000262213 M0R2T5 61 aa7.32□□□□□ -1.24
TRAM1-201ENST00000262213 UBR4Q5T4S7 5183 aa7.3□□□□□ -1.24
TRAM1-201ENST00000262213 SPRR5A0A1B0GTR4 108 aa7.29□□□□□ -1.24
TRAM1-201ENST00000262213 LCE2CQ5TA81 110 aa7.28□□□□□ -1.24
TRAM1-201ENST00000262213 RNF213Q63HN8 5207 aa7.27□□□□□ -1.24
TRAM1-201ENST00000262213 KRTAP19-1Q8IUB9 90 aa7.27□□□□□ -1.25
TRAM1-201ENST00000262213 SPRR2GQ9BYE4 73 aa7.25□□□□□ -1.25
TRAM1-201ENST00000262213 LCE3AQ5TA76 89 aa7.23□□□□□ -1.25
TRAM1-201ENST00000262213 KRTAP10-10P60014 251 aa7.14□□□□□ -1.27
TRAM1-201ENST00000262213 MT1FP04733 61 aa7.09□□□□□ -1.27
TRAM1-201ENST00000262213 MT1HP80294 61 aa7.09□□□□□ -1.27
TRAM1-201ENST00000262213 MT2AP02795 61 aa7.05□□□□□ -1.28
TRAM1-201ENST00000262213 KRTAP9-8Q9BYQ0 159 aa6.94□□□□□ -1.3
TRAM1-201ENST00000262213 KRTAP8-1Q8IUC2 63 aa6.91□□□□□ -1.3
TRAM1-201ENST00000262213 KRTAP10-5P60370 271 aa6.89□□□□□ -1.31
TRAM1-201ENST00000262213 MT1XP80297 61 aa6.87□□□□□ -1.31
TRAM1-201ENST00000262213 MT1BP07438 61 aa6.86□□□□□ -1.31
TRAM1-201ENST00000262213 KRTAP19-8Q3LI54 63 aa6.86□□□□□ -1.31
TRAM1-201ENST00000262213 KRTAP12-3P60328 96 aa6.84□□□□□ -1.31
TRAM1-201ENST00000262213 KRTAP10-12P60413 245 aa6.83□□□□□ -1.32
TRAM1-201ENST00000262213 KRTAP10-7P60409 375 aaPredicted RBP6.78□□□□□ -1.32
TRAM1-201ENST00000262213 LCE2AQ5TA79 106 aaPredicted RBP6.68□□□□□ -1.34
TRAM1-201ENST00000262213 PRO2289Q9P1D8 64 aa6.68□□□□□ -1.34
TRAM1-201ENST00000262213 KRTAP9-3Q9BYQ3 159 aa6.62□□□□□ -1.35
TRAM1-201ENST00000262213 INE1O15225 51 aa6.58□□□□□ -1.36
TRAM1-201ENST00000262213 KRTAP19-5Q3LI72 72 aa6.52□□□□□ -1.37
TRAM1-201ENST00000262213 KMT2DO14686 5537 aa6.49□□□□□ -1.37
TRAM1-201ENST00000262213 USH2AO75445 5202 aa6.47□□□□□ -1.37
TRAM1-201ENST00000262213 LCE3CQ5T5A8 94 aa6.42□□□□□ -1.38
TRAM1-201ENST00000262213 LCE2BO14633 110 aa6.39□□□□□ -1.39
TRAM1-201ENST00000262213 KRTAP4-8A0A0G2JLE6 195 aa6.37□□□□□ -1.39
TRAM1-201ENST00000262213 KRTAP4-8Q9BYQ9 185 aa6.37□□□□□ -1.39
TRAM1-201ENST00000262213 KRTAP9-6A8MVA2 160 aa6.28□□□□□ -1.4
TRAM1-201ENST00000262213 KRTAP4-7Q9BYR0 210 aa6.23□□□□□ -1.41
TRAM1-201ENST00000262213 KRTAP19-7Q3SYF9 63 aa6.11□□□□□ -1.43
TRAM1-201ENST00000262213 FSIP2Q5CZC0 6907 aa6.02□□□□□ -1.45
TRAM1-201ENST00000262213 KRTAP2-3P0C7H8 128 aa6.01□□□□□ -1.45
TRAM1-201ENST00000262213 KRTAP2-4Q9BYR9 128 aa6.01□□□□□ -1.45
TRAM1-201ENST00000262213 KRTAP2-1Q9BYU5 128 aa6.01□□□□□ -1.45
TRAM1-201ENST00000262213 SSPOA2VEC9 5147 aa6□□□□□ -1.45
TRAM1-201ENST00000262213 LCE2DQ5TA82 110 aaPredicted RBP5.99□□□□□ -1.45
TRAM1-201ENST00000262213 MT1LQ93083 61 aa5.95□□□□□ -1.46
TRAM1-201ENST00000262213 KRTAP19-6Q3LI70 58 aa5.92□□□□□ -1.46
TRAM1-201ENST00000262213 MT1EP04732 61 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms