RNA–Protein interactions for RNA: ENST00000262067.4

TSPAN13-201, Transcript of tetraspanin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN13, Length 2,093 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-201ENST00000262067 A8MU10 97 aa12.26□□□□□ -0.45
TSPAN13-201ENST00000262067 LCA10Q71F78 164 aa12.21□□□□□ -0.45
TSPAN13-201ENST00000262067 CDC42SE1Q9NRR8 79 aa12.13□□□□□ -0.47
TSPAN13-201ENST00000262067 SEC61GP60059 68 aa12.12□□□□□ -0.47
TSPAN13-201ENST00000262067 KRTAP3-3Q9BYR6 98 aa12.1□□□□□ -0.47
TSPAN13-201ENST00000262067 SEC61BP60468 96 aaKnown RBP12.09□□□□□ -0.47
TSPAN13-201ENST00000262067 S4R3F8 94 aa12.06□□□□□ -0.48
TSPAN13-201ENST00000262067 H1FX-AS1Q4G0G2 97 aa12.05□□□□□ -0.48
TSPAN13-201ENST00000262067 RBM12B-AS1Q9P1G2 102 aa12.03□□□□□ -0.48
TSPAN13-201ENST00000262067 UQCR11O14957 56 aa12.01□□□□□ -0.49
TSPAN13-201ENST00000262067 SPATA8Q6RVD6 105 aa11.95□□□□□ -0.5
TSPAN13-201ENST00000262067 KRTAP4-1Q9BYQ7 146 aa11.94□□□□□ -0.5
TSPAN13-201ENST00000262067 PCLOQ9Y6V0 5065 aa11.94□□□□□ -0.5
TSPAN13-201ENST00000262067 MIR22HGQ0VDD5 57 aa11.93□□□□□ -0.5
TSPAN13-201ENST00000262067 MUC17Q685J3 4493 aa11.86□□□□□ -0.51
TSPAN13-201ENST00000262067 A0A1B0GU33 70 aa11.85□□□□□ -0.51
TSPAN13-201ENST00000262067 PMAIP1Q13794 54 aa11.81□□□□□ -0.52
TSPAN13-201ENST00000262067 HERC1Q15751 4861 aa11.8□□□□□ -0.52
TSPAN13-201ENST00000262067 KRTAP10-6P60371 365 aaPredicted RBP11.78□□□□□ -0.52
TSPAN13-201ENST00000262067 H0YAA0 97 aa11.77□□□□□ -0.53
TSPAN13-201ENST00000262067 KRTAP3-2Q9BYR7 98 aa11.77□□□□□ -0.53
TSPAN13-201ENST00000262067 CSAG1Q6PB30 78 aa11.73□□□□□ -0.53
TSPAN13-201ENST00000262067 HMCN2Q8NDA2 5059 aa11.69□□□□□ -0.54
TSPAN13-201ENST00000262067 A6NN06 94 aa11.69□□□□□ -0.54
TSPAN13-201ENST00000262067 KRTAP19-2Q3LHN2 52 aa11.65□□□□□ -0.54
TSPAN13-201ENST00000262067 P0C880 135 aa11.64□□□□□ -0.55
TSPAN13-201ENST00000262067 ADM2Q7Z4H4 148 aa11.62□□□□□ -0.55
TSPAN13-201ENST00000262067 KRTAP13-4Q3LI77 160 aa11.55□□□□□ -0.56
TSPAN13-201ENST00000262067 MUC2Q02817 5179 aa11.52□□□□□ -0.57
TSPAN13-201ENST00000262067 KTN1-AS1Q86SY8 53 aa11.4□□□□□ -0.58
TSPAN13-201ENST00000262067 A0A0D9SG42 100 aa11.37□□□□□ -0.59
TSPAN13-201ENST00000262067 M0QZ58 72 aa11.27□□□□□ -0.61
TSPAN13-201ENST00000262067 FLGP20930 4061 aaPredicted RBP11.26□□□□□ -0.61
TSPAN13-201ENST00000262067 K7ERS5 55 aa11.26□□□□□ -0.61
TSPAN13-201ENST00000262067 LCE2CQ5TA81 110 aa11.23□□□□□ -0.61
TSPAN13-201ENST00000262067 LORP23490 312 aaPredicted RBP11.18□□□□□ -0.62
TSPAN13-201ENST00000262067 UBR4Q5T4S7 5183 aa11.15□□□□□ -0.62
TSPAN13-201ENST00000262067 R4GN34 69 aa11.14□□□□□ -0.63
TSPAN13-201ENST00000262067 RNF213Q63HN8 5207 aa11.12□□□□□ -0.63
TSPAN13-201ENST00000262067 KRTAP12-2P59991 146 aa11.1□□□□□ -0.63
TSPAN13-201ENST00000262067 PRAC1Q96KF2 57 aa11.1□□□□□ -0.63
TSPAN13-201ENST00000262067 KRTAP12-1P59990 96 aa11.08□□□□□ -0.63
TSPAN13-201ENST00000262067 SPINT4Q6UDR6 99 aa11.04□□□□□ -0.64
TSPAN13-201ENST00000262067 LINC01554Q52M75 96 aa11.03□□□□□ -0.64
TSPAN13-201ENST00000262067 FAT4Q6V0I7 4981 aa11.01□□□□□ -0.65
TSPAN13-201ENST00000262067 MT1HP80294 61 aa10.95□□□□□ -0.66
TSPAN13-201ENST00000262067 ROMO1P60602 79 aa10.91□□□□□ -0.66
TSPAN13-201ENST00000262067 M0R2T5 61 aa10.89□□□□□ -0.67
TSPAN13-201ENST00000262067 CRIPTQ9P021 101 aa10.81□□□□□ -0.68
TSPAN13-201ENST00000262067 H3BS24 57 aa10.77□□□□□ -0.69
TSPAN13-201ENST00000262067 KRTAP25-1Q3LHN0 102 aa10.67□□□□□ -0.7
TSPAN13-201ENST00000262067 MT2AP02795 61 aa10.62□□□□□ -0.71
TSPAN13-201ENST00000262067 KRTAP9-8Q9BYQ0 159 aa10.62□□□□□ -0.71
TSPAN13-201ENST00000262067 MT1FP04733 61 aa10.59□□□□□ -0.71
TSPAN13-201ENST00000262067 SPRR2GQ9BYE4 73 aa10.56□□□□□ -0.72
TSPAN13-201ENST00000262067 KRTAP10-10P60014 251 aa10.56□□□□□ -0.72
TSPAN13-201ENST00000262067 KRTAP19-1Q8IUB9 90 aa10.54□□□□□ -0.72
TSPAN13-201ENST00000262067 CAMK2N1Q7Z7J9 78 aa10.49□□□□□ -0.73
TSPAN13-201ENST00000262067 C10orf95Q9H7T3 257 aa10.49□□□□□ -0.73
TSPAN13-201ENST00000262067 PLAC4Q8WY50 150 aa10.3□□□□□ -0.76
TSPAN13-201ENST00000262067 KRTAP19-8Q3LI54 63 aa10.21□□□□□ -0.77
TSPAN13-201ENST00000262067 LCE2AQ5TA79 106 aaPredicted RBP10.21□□□□□ -0.77
TSPAN13-201ENST00000262067 KRTAP9-3Q9BYQ3 159 aa10.21□□□□□ -0.78
TSPAN13-201ENST00000262067 A0A0A0MQY5 61 aa10.14□□□□□ -0.79
TSPAN13-201ENST00000262067 MT1BP07438 61 aa10.1□□□□□ -0.79
TSPAN13-201ENST00000262067 TNP1P09430 55 aa10.02□□□□□ -0.81
TSPAN13-201ENST00000262067 PP632Q6XCG6 107 aa9.89□□□□□ -0.83
TSPAN13-201ENST00000262067 LCE2BO14633 110 aa9.89□□□□□ -0.83
TSPAN13-201ENST00000262067 KRTAP10-5P60370 271 aa9.86□□□□□ -0.83
TSPAN13-201ENST00000262067 MT1XP80297 61 aa9.86□□□□□ -0.83
TSPAN13-201ENST00000262067 LCE2DQ5TA82 110 aaPredicted RBP9.8□□□□□ -0.84
TSPAN13-201ENST00000262067 KRTAP23-1A1A580 65 aa9.77□□□□□ -0.85
TSPAN13-201ENST00000262067 PRO2289Q9P1D8 64 aa9.61□□□□□ -0.87
TSPAN13-201ENST00000262067 LCE3AQ5TA76 89 aa9.59□□□□□ -0.87
TSPAN13-201ENST00000262067 KRTAP15-1Q3LI76 137 aa9.55□□□□□ -0.88
TSPAN13-201ENST00000262067 USH2AO75445 5202 aa9.53□□□□□ -0.88
TSPAN13-201ENST00000262067 KRTAP10-7P60409 375 aaPredicted RBP9.52□□□□□ -0.88
TSPAN13-201ENST00000262067 KRTAP10-12P60413 245 aa9.45□□□□□ -0.9
TSPAN13-201ENST00000262067 KRTAP8-1Q8IUC2 63 aa9.36□□□□□ -0.91
TSPAN13-201ENST00000262067 KRTAP12-3P60328 96 aa9.17□□□□□ -0.94
TSPAN13-201ENST00000262067 SSPOA2VEC9 5147 aa9.16□□□□□ -0.94
TSPAN13-201ENST00000262067 KRTAP19-6Q3LI70 58 aa9.11□□□□□ -0.95
TSPAN13-201ENST00000262067 KRTAP4-8A0A0G2JLE6 195 aa9.08□□□□□ -0.96
TSPAN13-201ENST00000262067 KRTAP4-8Q9BYQ9 185 aa9.08□□□□□ -0.96
TSPAN13-201ENST00000262067 KRTAP19-5Q3LI72 72 aa9.02□□□□□ -0.97
TSPAN13-201ENST00000262067 NDUFAF8A1L188 74 aa9.01□□□□□ -0.97
TSPAN13-201ENST00000262067 KMT2DO14686 5537 aa9.01□□□□□ -0.97
TSPAN13-201ENST00000262067 SPRR5A0A1B0GTR4 108 aa8.98□□□□□ -0.97
TSPAN13-201ENST00000262067 FSIP2Q5CZC0 6907 aa8.98□□□□□ -0.97
TSPAN13-201ENST00000262067 LUZP6Q538Z0 58 aa8.85□□□□□ -0.99
TSPAN13-201ENST00000262067 KRTAP19-7Q3SYF9 63 aa8.8□□□□□ -1
TSPAN13-201ENST00000262067 FCGBPQ9Y6R7 5405 aaPredicted RBP8.68□□□□□ -1.02
TSPAN13-201ENST00000262067 MT1EP04732 61 aa8.6□□□□□ -1.03
TSPAN13-201ENST00000262067 LCE3CQ5T5A8 94 aa8.6□□□□□ -1.03
TSPAN13-201ENST00000262067 KRTAP9-2Q9BYQ4 174 aa8.56□□□□□ -1.04
TSPAN13-201ENST00000262067 MT1LQ93083 61 aa8.49□□□□□ -1.05
TSPAN13-201ENST00000262067 KRTAP4-7Q9BYR0 210 aa8.39□□□□□ -1.07
TSPAN13-201ENST00000262067 KRTAP19-4Q3LI73 84 aa8.37□□□□□ -1.07
TSPAN13-201ENST00000262067 CRCT1Q9UGL9 99 aa8.31□□□□□ -1.08
TSPAN13-201ENST00000262067 KRTAP9-6A8MVA2 160 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms