RNA–Protein interactions for RNA: ENST00000262055.8

LETMD1-201, Transcript of LETM1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETMD1, Length 2,112 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-201ENST00000262055 HERC1Q15751 4861 aa8.34□□□□□ -1.07
LETMD1-201ENST00000262055 SSBP3-AS1Q7Z2R9 100 aa8.33□□□□□ -1.08
LETMD1-201ENST00000262055 IGKV2-30P06310 120 aa8.32□□□□□ -1.08
LETMD1-201ENST00000262055 LINC00304Q8N9R0 145 aa8.3□□□□□ -1.08
LETMD1-201ENST00000262055 J3QL48 77 aa8.28□□□□□ -1.08
LETMD1-201ENST00000262055 KRTAP25-1Q3LHN0 102 aa8.25□□□□□ -1.09
LETMD1-201ENST00000262055 ROMO1P60602 79 aa8.23□□□□□ -1.09
LETMD1-201ENST00000262055 SPINK1P00995 79 aa8.21□□□□□ -1.1
LETMD1-201ENST00000262055 A8MUU9 505 aa8.2□□□□□ -1.1
LETMD1-201ENST00000262055 IGKV2D-30A0A075B6S6 120 aa8.18□□□□□ -1.1
LETMD1-201ENST00000262055 RPS29P62273 56 aaKnown RBP8.15□□□□□ -1.1
LETMD1-201ENST00000262055 LPAP08519 4548 aa8.12□□□□□ -1.11
LETMD1-201ENST00000262055 HMCN2Q8NDA2 5059 aa8.11□□□□□ -1.11
LETMD1-201ENST00000262055 KRTAP16-1A8MUX0 517 aa8.08□□□□□ -1.12
LETMD1-201ENST00000262055 H0YAA0 97 aa8.05□□□□□ -1.12
LETMD1-201ENST00000262055 LRP2P98164 4655 aa8.03□□□□□ -1.12
LETMD1-201ENST00000262055 A0A1B0GU33 70 aa7.96□□□□□ -1.14
LETMD1-201ENST00000262055 P0C880 135 aa7.94□□□□□ -1.14
LETMD1-201ENST00000262055 K7ERS5 55 aa7.93□□□□□ -1.14
LETMD1-201ENST00000262055 H1FX-AS1Q4G0G2 97 aa7.93□□□□□ -1.14
LETMD1-201ENST00000262055 C9orf92A6NGG3 77 aa7.91□□□□□ -1.14
LETMD1-201ENST00000262055 TPRXLQ17RH7 258 aa7.88□□□□□ -1.15
LETMD1-201ENST00000262055 UBR4Q5T4S7 5183 aa7.84□□□□□ -1.15
LETMD1-201ENST00000262055 XP32Q5T750 250 aa7.82□□□□□ -1.16
LETMD1-201ENST00000262055 MUC17Q685J3 4493 aa7.75□□□□□ -1.17
LETMD1-201ENST00000262055 MUC2Q02817 5179 aa7.72□□□□□ -1.17
LETMD1-201ENST00000262055 C20orf166-AS1Q96NR2 134 aa7.71□□□□□ -1.18
LETMD1-201ENST00000262055 CRIPTQ9P021 101 aa7.71□□□□□ -1.18
LETMD1-201ENST00000262055 SPINT4Q6UDR6 99 aa7.7□□□□□ -1.18
LETMD1-201ENST00000262055 RPL37P61927 97 aaKnown RBP7.69□□□□□ -1.18
LETMD1-201ENST00000262055 COX6B2Q6YFQ2 88 aa7.69□□□□□ -1.18
LETMD1-201ENST00000262055 RNF213Q63HN8 5207 aa7.68□□□□□ -1.18
LETMD1-201ENST00000262055 SEC61BP60468 96 aaKnown RBP7.68□□□□□ -1.18
LETMD1-201ENST00000262055 KRTAP15-1Q3LI76 137 aa7.66□□□□□ -1.18
LETMD1-201ENST00000262055 KRTAP3-1Q9BYR8 98 aa7.66□□□□□ -1.18
LETMD1-201ENST00000262055 KRTAP4-1Q9BYQ7 146 aa7.61□□□□□ -1.19
LETMD1-201ENST00000262055 NDUFAF8A1L188 74 aa7.59□□□□□ -1.19
LETMD1-201ENST00000262055 LUZP6Q538Z0 58 aa7.5□□□□□ -1.21
LETMD1-201ENST00000262055 KRTAP10-6P60371 365 aaPredicted RBP7.46□□□□□ -1.22
LETMD1-201ENST00000262055 FAT4Q6V0I7 4981 aa7.43□□□□□ -1.22
LETMD1-201ENST00000262055 C10orf95Q9H7T3 257 aa7.4□□□□□ -1.22
LETMD1-201ENST00000262055 KRTAP13-4Q3LI77 160 aa7.4□□□□□ -1.23
LETMD1-201ENST00000262055 KRTAP19-2Q3LHN2 52 aa7.36□□□□□ -1.23
LETMD1-201ENST00000262055 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
LETMD1-201ENST00000262055 A0A0D9SG42 100 aa7.35□□□□□ -1.23
LETMD1-201ENST00000262055 S4R3F8 94 aa7.35□□□□□ -1.23
LETMD1-201ENST00000262055 KRTAP3-3Q9BYR6 98 aa7.31□□□□□ -1.24
LETMD1-201ENST00000262055 LCE2CQ5TA81 110 aa7.29□□□□□ -1.24
LETMD1-201ENST00000262055 FLGP20930 4061 aaPredicted RBP7.27□□□□□ -1.25
LETMD1-201ENST00000262055 KRTAP12-2P59991 146 aa7.23□□□□□ -1.25
LETMD1-201ENST00000262055 KRTAP12-1P59990 96 aa7.19□□□□□ -1.26
LETMD1-201ENST00000262055 MT1HP80294 61 aa7.13□□□□□ -1.27
LETMD1-201ENST00000262055 LCE2AQ5TA79 106 aaPredicted RBP7.1□□□□□ -1.27
LETMD1-201ENST00000262055 M0QZ58 72 aa7.09□□□□□ -1.27
LETMD1-201ENST00000262055 PLAC4Q8WY50 150 aa7.02□□□□□ -1.29
LETMD1-201ENST00000262055 M0R2T5 61 aa6.97□□□□□ -1.29
LETMD1-201ENST00000262055 CAMK2N1Q7Z7J9 78 aa6.96□□□□□ -1.3
LETMD1-201ENST00000262055 LORP23490 312 aaPredicted RBP6.89□□□□□ -1.31
LETMD1-201ENST00000262055 KRTAP9-8Q9BYQ0 159 aa6.83□□□□□ -1.32
LETMD1-201ENST00000262055 PP632Q6XCG6 107 aa6.82□□□□□ -1.32
LETMD1-201ENST00000262055 MT2AP02795 61 aa6.77□□□□□ -1.33
LETMD1-201ENST00000262055 MT1FP04733 61 aa6.74□□□□□ -1.33
LETMD1-201ENST00000262055 R4GN34 69 aa6.67□□□□□ -1.34
LETMD1-201ENST00000262055 KRTAP10-10P60014 251 aa6.66□□□□□ -1.34
LETMD1-201ENST00000262055 KRTAP9-3Q9BYQ3 159 aa6.59□□□□□ -1.35
LETMD1-201ENST00000262055 SPRR5A0A1B0GTR4 108 aa6.55□□□□□ -1.36
LETMD1-201ENST00000262055 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
LETMD1-201ENST00000262055 LCE2DQ5TA82 110 aaPredicted RBP6.5□□□□□ -1.37
LETMD1-201ENST00000262055 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
LETMD1-201ENST00000262055 LCE2BO14633 110 aa6.49□□□□□ -1.37
LETMD1-201ENST00000262055 PRO2289Q9P1D8 64 aa6.49□□□□□ -1.37
LETMD1-201ENST00000262055 USH2AO75445 5202 aa6.48□□□□□ -1.37
LETMD1-201ENST00000262055 KRTAP9-2Q9BYQ4 174 aa6.47□□□□□ -1.37
LETMD1-201ENST00000262055 FSIP2Q5CZC0 6907 aa6.47□□□□□ -1.37
LETMD1-201ENST00000262055 SPRR2GQ9BYE4 73 aa6.44□□□□□ -1.38
LETMD1-201ENST00000262055 SSPOA2VEC9 5147 aa6.36□□□□□ -1.39
LETMD1-201ENST00000262055 KRTAP19-8Q3LI54 63 aa6.32□□□□□ -1.4
LETMD1-201ENST00000262055 MT1BP07438 61 aa6.31□□□□□ -1.4
LETMD1-201ENST00000262055 TNP1P09430 55 aa6.31□□□□□ -1.4
LETMD1-201ENST00000262055 INE1O15225 51 aa6.29□□□□□ -1.4
LETMD1-201ENST00000262055 CRCT1Q9UGL9 99 aa6.17□□□□□ -1.42
LETMD1-201ENST00000262055 KRTAP19-6Q3LI70 58 aa6.11□□□□□ -1.43
LETMD1-201ENST00000262055 FCGBPQ9Y6R7 5405 aaPredicted RBP6.1□□□□□ -1.43
LETMD1-201ENST00000262055 KRTAP9-6A0A140TA67 174 aa6.07□□□□□ -1.44
LETMD1-201ENST00000262055 MT1XP80297 61 aa6.03□□□□□ -1.44
LETMD1-201ENST00000262055 KRTAP10-5P60370 271 aa6.02□□□□□ -1.45
LETMD1-201ENST00000262055 MACF1Q9UPN3 7388 aaKnown RBP5.85□□□□□ -1.47
LETMD1-201ENST00000262055 KMT2DO14686 5537 aa5.83□□□□□ -1.48
LETMD1-201ENST00000262055 LCE3AQ5TA76 89 aa5.81□□□□□ -1.48
LETMD1-201ENST00000262055 KRTAP10-7P60409 375 aaPredicted RBP5.79□□□□□ -1.48
LETMD1-201ENST00000262055 KRTAP8-1Q8IUC2 63 aa5.78□□□□□ -1.48
LETMD1-201ENST00000262055 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.75□□□□□ -1.49
LETMD1-201ENST00000262055 SYNE2Q8WXH0 6885 aaKnown RBP5.73□□□□□ -1.49
LETMD1-201ENST00000262055 KRTAP10-12P60413 245 aa5.69□□□□□ -1.5
LETMD1-201ENST00000262055 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
LETMD1-201ENST00000262055 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
LETMD1-201ENST00000262055 KRTAP12-3P60328 96 aa5.55□□□□□ -1.52
LETMD1-201ENST00000262055 KRTAP9-7A8MTY7 169 aa5.52□□□□□ -1.53
LETMD1-201ENST00000262055 MUC12Q9UKN1 5478 aa5.49□□□□□ -1.53
LETMD1-201ENST00000262055 KRTAP6-3Q3LI67 103 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms