RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 NDUFC1O43677 76 aa8.82□□□□□ -1
CYSTM1-201ENST00000261811 SERP2Q8N6R1 65 aa8.8□□□□□ -1
CYSTM1-201ENST00000261811 KRTAP9-3Q9BYQ3 159 aa8.77□□□□□ -1.01
CYSTM1-201ENST00000261811 KRTAP3-3Q9BYR6 98 aa8.77□□□□□ -1.01
CYSTM1-201ENST00000261811 DMAC1Q96GE9 116 aa8.75□□□□□ -1.01
CYSTM1-201ENST00000261811 SNURFQ9Y675 71 aa8.71□□□□□ -1.02
CYSTM1-201ENST00000261811 C20orf197Q8N268 126 aa8.7□□□□□ -1.02
CYSTM1-201ENST00000261811 ACYP2P14621 99 aa8.68□□□□□ -1.02
CYSTM1-201ENST00000261811 LCE2BO14633 110 aa8.62□□□□□ -1.03
CYSTM1-201ENST00000261811 H0YAA0 97 aa8.61□□□□□ -1.03
CYSTM1-201ENST00000261811 COX7CP15954 63 aa8.61□□□□□ -1.03
CYSTM1-201ENST00000261811 SPANXA2-OT1Q8N9U9 137 aa8.6□□□□□ -1.03
CYSTM1-201ENST00000261811 SPTSSBQ8NFR3 76 aa8.57□□□□□ -1.04
CYSTM1-201ENST00000261811 CRIPTQ9P021 101 aa8.56□□□□□ -1.04
CYSTM1-201ENST00000261811 CHKB-CPT1BH3BT56 60 aa8.54□□□□□ -1.04
CYSTM1-201ENST00000261811 ADM2Q7Z4H4 148 aa8.52□□□□□ -1.05
CYSTM1-201ENST00000261811 ANAPC13Q9BS18 74 aa8.52□□□□□ -1.05
CYSTM1-201ENST00000261811 KRTAP3-2Q9BYR7 98 aa8.47□□□□□ -1.05
CYSTM1-201ENST00000261811 KRTAP19-1Q8IUB9 90 aa8.46□□□□□ -1.06
CYSTM1-201ENST00000261811 SPRR2GQ9BYE4 73 aa8.46□□□□□ -1.06
CYSTM1-201ENST00000261811 USH2AO75445 5202 aa8.46□□□□□ -1.06
CYSTM1-201ENST00000261811 SSPOA2VEC9 5147 aa8.44□□□□□ -1.06
CYSTM1-201ENST00000261811 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.43□□□□□ -1.06
CYSTM1-201ENST00000261811 Q5VV11 94 aa8.39□□□□□ -1.07
CYSTM1-201ENST00000261811 KRTAP9-7A8MTY7 169 aa8.38□□□□□ -1.07
CYSTM1-201ENST00000261811 H7BZZ5 65 aa8.35□□□□□ -1.07
CYSTM1-201ENST00000261811 KRTAP19-8Q3LI54 63 aa8.33□□□□□ -1.08
CYSTM1-201ENST00000261811 KRTAP19-6Q3LI70 58 aa8.32□□□□□ -1.08
CYSTM1-201ENST00000261811 R4GN34 69 aa8.32□□□□□ -1.08
CYSTM1-201ENST00000261811 P0C880 135 aa8.3□□□□□ -1.08
CYSTM1-201ENST00000261811 COA5Q86WW8 74 aa8.3□□□□□ -1.08
CYSTM1-201ENST00000261811 CYSTM1Q9H1C7 97 aa8.29□□□□□ -1.08
CYSTM1-201ENST00000261811 FCGBPQ9Y6R7 5405 aaPredicted RBP8.27□□□□□ -1.08
CYSTM1-201ENST00000261811 CCDC179H3BU77 68 aa8.25□□□□□ -1.09
CYSTM1-201ENST00000261811 M0QZ58 72 aa8.25□□□□□ -1.09
CYSTM1-201ENST00000261811 MT1BP07438 61 aa8.24□□□□□ -1.09
CYSTM1-201ENST00000261811 ATP5EP56381 51 aaPredicted RBP8.18□□□□□ -1.1
CYSTM1-201ENST00000261811 SEC61GP60059 68 aa8.18□□□□□ -1.1
CYSTM1-201ENST00000261811 PLAC4Q8WY50 150 aa8.14□□□□□ -1.11
CYSTM1-201ENST00000261811 A6NN06 94 aa8.13□□□□□ -1.11
CYSTM1-201ENST00000261811 SERP1Q9Y6X1 66 aa8.12□□□□□ -1.11
CYSTM1-201ENST00000261811 MACF1Q9UPN3 7388 aaKnown RBP8.11□□□□□ -1.11
CYSTM1-201ENST00000261811 LINC01554Q52M75 96 aa8.1□□□□□ -1.11
CYSTM1-201ENST00000261811 SYNE2Q8WXH0 6885 aaKnown RBP8.05□□□□□ -1.12
CYSTM1-201ENST00000261811 TMEM258P61165 79 aa8.04□□□□□ -1.12
CYSTM1-201ENST00000261811 KRTAP10-5P60370 271 aa8.03□□□□□ -1.12
CYSTM1-201ENST00000261811 PRO2289Q9P1D8 64 aa8.01□□□□□ -1.13
CYSTM1-201ENST00000261811 A0A1B0GU69 56 aa7.94□□□□□ -1.14
CYSTM1-201ENST00000261811 A0A1B0GU33 70 aa7.91□□□□□ -1.14
CYSTM1-201ENST00000261811 PRR15LQ9BU68 103 aa7.87□□□□□ -1.15
CYSTM1-201ENST00000261811 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
CYSTM1-201ENST00000261811 MT1XP80297 61 aa7.82□□□□□ -1.16
CYSTM1-201ENST00000261811 KRTAP6-3Q3LI67 103 aa7.78□□□□□ -1.16
CYSTM1-201ENST00000261811 SPATA8Q6RVD6 105 aa7.78□□□□□ -1.16
CYSTM1-201ENST00000261811 LINC01558Q9Y6Z2 57 aa7.76□□□□□ -1.17
CYSTM1-201ENST00000261811 A0A0D9SG42 100 aa7.75□□□□□ -1.17
CYSTM1-201ENST00000261811 SMIM26A0A096LP01 95 aa7.73□□□□□ -1.17
CYSTM1-201ENST00000261811 CAMK2N1Q7Z7J9 78 aa7.73□□□□□ -1.17
CYSTM1-201ENST00000261811 PCP4P48539 62 aa7.65□□□□□ -1.18
CYSTM1-201ENST00000261811 SPINT4Q6UDR6 99 aa7.65□□□□□ -1.18
CYSTM1-201ENST00000261811 KRTAP12-2P59991 146 aa7.63□□□□□ -1.19
CYSTM1-201ENST00000261811 V9GYY9 64 aa7.62□□□□□ -1.19
CYSTM1-201ENST00000261811 NEBP20929 6669 aa7.58□□□□□ -1.2
CYSTM1-201ENST00000261811 UQCR11O14957 56 aa7.57□□□□□ -1.2
CYSTM1-201ENST00000261811 KRTAP12-1P59990 96 aa7.56□□□□□ -1.2
CYSTM1-201ENST00000261811 A8MU10 97 aa7.52□□□□□ -1.2
CYSTM1-201ENST00000261811 MUC12Q9UKN1 5478 aa7.5□□□□□ -1.21
CYSTM1-201ENST00000261811 Q1T7F1 81 aa7.5□□□□□ -1.21
CYSTM1-201ENST00000261811 KRTAP8-1Q8IUC2 63 aa7.48□□□□□ -1.21
CYSTM1-201ENST00000261811 KRTAP10-7P60409 375 aaPredicted RBP7.47□□□□□ -1.21
CYSTM1-201ENST00000261811 KRTAP10-12P60413 245 aa7.47□□□□□ -1.21
CYSTM1-201ENST00000261811 KRTAP5-9P26371 169 aa7.46□□□□□ -1.22
CYSTM1-201ENST00000261811 RPS28P62857 69 aaKnown RBP7.43□□□□□ -1.22
CYSTM1-201ENST00000261811 PSPHP1O15172 72 aa7.42□□□□□ -1.22
CYSTM1-201ENST00000261811 MIR22HGQ0VDD5 57 aa7.4□□□□□ -1.22
CYSTM1-201ENST00000261811 SPRR2FQ96RM1 72 aa7.36□□□□□ -1.23
CYSTM1-201ENST00000261811 KRTAP4-8A0A0G2JLE6 195 aa7.35□□□□□ -1.23
CYSTM1-201ENST00000261811 KRTAP4-8Q9BYQ9 185 aa7.35□□□□□ -1.23
CYSTM1-201ENST00000261811 K7ERS5 55 aa7.31□□□□□ -1.24
CYSTM1-201ENST00000261811 KMT2DO14686 5537 aa7.31□□□□□ -1.24
CYSTM1-201ENST00000261811 KRTAP20-1Q3LI63 56 aa7.3□□□□□ -1.24
CYSTM1-201ENST00000261811 A6NED7 52 aa7.25□□□□□ -1.25
CYSTM1-201ENST00000261811 MDN1Q9NU22 5596 aa7.22□□□□□ -1.25
CYSTM1-201ENST00000261811 TNP1P09430 55 aa7.21□□□□□ -1.26
CYSTM1-201ENST00000261811 SPRR2EP22531 72 aa7.18□□□□□ -1.26
CYSTM1-201ENST00000261811 SPRR2BP35325 72 aa7.18□□□□□ -1.26
CYSTM1-201ENST00000261811 SPRR2AP35326 72 aa7.18□□□□□ -1.26
CYSTM1-201ENST00000261811 C10orf95Q9H7T3 257 aa7.18□□□□□ -1.26
CYSTM1-201ENST00000261811 LCE1AQ5T7P2 110 aa7.08□□□□□ -1.28
CYSTM1-201ENST00000261811 KRTAP2-3P0C7H8 128 aa7.04□□□□□ -1.28
CYSTM1-201ENST00000261811 KRTAP2-4Q9BYR9 128 aa7.04□□□□□ -1.28
CYSTM1-201ENST00000261811 LOC100996750A0A140TA64 210 aa7.03□□□□□ -1.28
CYSTM1-201ENST00000261811 KRTAP4-6Q9BYQ5 205 aa7.03□□□□□ -1.28
CYSTM1-201ENST00000261811 KRTAP25-1Q3LHN0 102 aa6.98□□□□□ -1.29
CYSTM1-201ENST00000261811 KRTAP19-7Q3SYF9 63 aa6.98□□□□□ -1.29
CYSTM1-201ENST00000261811 CDC42SE1Q9NRR8 79 aa6.97□□□□□ -1.29
CYSTM1-201ENST00000261811 SPRR2DP22532 72 aa6.95□□□□□ -1.3
CYSTM1-201ENST00000261811 LCE3AQ5TA76 89 aa6.95□□□□□ -1.3
CYSTM1-201ENST00000261811 KRTAP19-5Q3LI72 72 aa6.93□□□□□ -1.3
CYSTM1-201ENST00000261811 MT1EP04732 61 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms