RNA–Protein interactions for RNA: ENST00000261692.6

CDK2AP1-201, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK2AP1, Length 1,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-201ENST00000261692 C7orf65Q6ZTY9 151 aa12.4□□□□□ -0.42
CDK2AP1-201ENST00000261692 A6NED7 52 aa12.39□□□□□ -0.43
CDK2AP1-201ENST00000261692 ACYP2P14621 99 aa12.39□□□□□ -0.43
CDK2AP1-201ENST00000261692 IGKV2D-30A0A075B6S6 120 aa12.37□□□□□ -0.43
CDK2AP1-201ENST00000261692 IGKV2-30P06310 120 aa12.37□□□□□ -0.43
CDK2AP1-201ENST00000261692 CDC42SE1Q9NRR8 79 aa12.37□□□□□ -0.43
CDK2AP1-201ENST00000261692 DMAC1Q96GE9 116 aa12.29□□□□□ -0.44
CDK2AP1-201ENST00000261692 LCA10Q71F78 164 aa12.26□□□□□ -0.45
CDK2AP1-201ENST00000261692 RBM12B-AS1Q9P1G2 102 aa12.26□□□□□ -0.45
CDK2AP1-201ENST00000261692 COX6B2Q6YFQ2 88 aa12.18□□□□□ -0.46
CDK2AP1-201ENST00000261692 FAT4Q6V0I7 4981 aa12.18□□□□□ -0.46
CDK2AP1-201ENST00000261692 SPTSSBQ8NFR3 76 aa12.17□□□□□ -0.46
CDK2AP1-201ENST00000261692 KRTAP19-2Q3LHN2 52 aa12.16□□□□□ -0.46
CDK2AP1-201ENST00000261692 A8MU10 97 aa12.15□□□□□ -0.46
CDK2AP1-201ENST00000261692 KTN1-AS1Q86SY8 53 aa12.15□□□□□ -0.46
CDK2AP1-201ENST00000261692 A6NN06 94 aa12.1□□□□□ -0.47
CDK2AP1-201ENST00000261692 SEC61GP60059 68 aa12.08□□□□□ -0.48
CDK2AP1-201ENST00000261692 LCE2CQ5TA81 110 aa12.07□□□□□ -0.48
CDK2AP1-201ENST00000261692 A0A1B0GU69 56 aa12.01□□□□□ -0.49
CDK2AP1-201ENST00000261692 FLGP20930 4061 aaPredicted RBP11.96□□□□□ -0.49
CDK2AP1-201ENST00000261692 H1FX-AS1Q4G0G2 97 aa11.92□□□□□ -0.5
CDK2AP1-201ENST00000261692 MT1HP80294 61 aa11.89□□□□□ -0.51
CDK2AP1-201ENST00000261692 SPATA8Q6RVD6 105 aa11.89□□□□□ -0.51
CDK2AP1-201ENST00000261692 UQCR11O14957 56 aa11.86□□□□□ -0.51
CDK2AP1-201ENST00000261692 KRTAP3-1Q9BYR8 98 aa11.86□□□□□ -0.51
CDK2AP1-201ENST00000261692 LCE2AQ5TA79 106 aaPredicted RBP11.85□□□□□ -0.51
CDK2AP1-201ENST00000261692 M0R2T5 61 aa11.8□□□□□ -0.52
CDK2AP1-201ENST00000261692 MIR22HGQ0VDD5 57 aa11.78□□□□□ -0.52
CDK2AP1-201ENST00000261692 S4R3F8 94 aa11.71□□□□□ -0.54
CDK2AP1-201ENST00000261692 KRTAP10-6P60371 365 aaPredicted RBP11.56□□□□□ -0.56
CDK2AP1-201ENST00000261692 CSAG1Q6PB30 78 aa11.53□□□□□ -0.56
CDK2AP1-201ENST00000261692 LORP23490 312 aaPredicted RBP11.52□□□□□ -0.57
CDK2AP1-201ENST00000261692 KRTAP3-3Q9BYR6 98 aa11.49□□□□□ -0.57
CDK2AP1-201ENST00000261692 KRTAP9-8Q9BYQ0 159 aa11.37□□□□□ -0.59
CDK2AP1-201ENST00000261692 A0A1B0GU33 70 aa11.33□□□□□ -0.6
CDK2AP1-201ENST00000261692 PRAC1Q96KF2 57 aa11.32□□□□□ -0.6
CDK2AP1-201ENST00000261692 MT2AP02795 61 aa11.27□□□□□ -0.6
CDK2AP1-201ENST00000261692 H0YAA0 97 aa11.26□□□□□ -0.61
CDK2AP1-201ENST00000261692 ADM2Q7Z4H4 148 aa11.25□□□□□ -0.61
CDK2AP1-201ENST00000261692 KRTAP9-2Q9BYQ4 174 aa11.25□□□□□ -0.61
CDK2AP1-201ENST00000261692 LINC01554Q52M75 96 aa11.23□□□□□ -0.61
CDK2AP1-201ENST00000261692 KRTAP10-10P60014 251 aa11.2□□□□□ -0.62
CDK2AP1-201ENST00000261692 MT1FP04733 61 aa11.2□□□□□ -0.62
CDK2AP1-201ENST00000261692 K7ERS5 55 aa11.18□□□□□ -0.62
CDK2AP1-201ENST00000261692 LCE2DQ5TA82 110 aaPredicted RBP11.05□□□□□ -0.64
CDK2AP1-201ENST00000261692 KRTAP9-3Q9BYQ3 159 aa10.98□□□□□ -0.65
CDK2AP1-201ENST00000261692 CRIPTQ9P021 101 aa10.96□□□□□ -0.65
CDK2AP1-201ENST00000261692 KRTAP25-1Q3LHN0 102 aa10.94□□□□□ -0.66
CDK2AP1-201ENST00000261692 KRTAP3-2Q9BYR7 98 aa10.94□□□□□ -0.66
CDK2AP1-201ENST00000261692 P0C880 135 aa10.91□□□□□ -0.66
CDK2AP1-201ENST00000261692 SPRR2GQ9BYE4 73 aa10.81□□□□□ -0.68
CDK2AP1-201ENST00000261692 KRTAP9-6A0A140TA67 174 aa10.79□□□□□ -0.68
CDK2AP1-201ENST00000261692 ROMO1P60602 79 aa10.79□□□□□ -0.68
CDK2AP1-201ENST00000261692 KRTAP19-1Q8IUB9 90 aa10.79□□□□□ -0.68
CDK2AP1-201ENST00000261692 R4GN34 69 aa10.79□□□□□ -0.68
CDK2AP1-201ENST00000261692 FSIP2Q5CZC0 6907 aa10.75□□□□□ -0.69
CDK2AP1-201ENST00000261692 LCE2BO14633 110 aa10.75□□□□□ -0.69
CDK2AP1-201ENST00000261692 M0QZ58 72 aa10.71□□□□□ -0.69
CDK2AP1-201ENST00000261692 CRCT1Q9UGL9 99 aa10.67□□□□□ -0.7
CDK2AP1-201ENST00000261692 KRTAP13-4Q3LI77 160 aa10.65□□□□□ -0.7
CDK2AP1-201ENST00000261692 USH2AO75445 5202 aa10.63□□□□□ -0.71
CDK2AP1-201ENST00000261692 KRTAP19-8Q3LI54 63 aa10.61□□□□□ -0.71
CDK2AP1-201ENST00000261692 A0A0D9SG42 100 aa10.57□□□□□ -0.72
CDK2AP1-201ENST00000261692 MT1BP07438 61 aa10.47□□□□□ -0.73
CDK2AP1-201ENST00000261692 SSPOA2VEC9 5147 aa10.39□□□□□ -0.75
CDK2AP1-201ENST00000261692 KRTAP12-1P59990 96 aa10.36□□□□□ -0.75
CDK2AP1-201ENST00000261692 PLAC4Q8WY50 150 aa10.36□□□□□ -0.75
CDK2AP1-201ENST00000261692 KRTAP12-2P59991 146 aa10.35□□□□□ -0.75
CDK2AP1-201ENST00000261692 KRTAP19-6Q3LI70 58 aa10.29□□□□□ -0.76
CDK2AP1-201ENST00000261692 SPINT4Q6UDR6 99 aa10.29□□□□□ -0.76
CDK2AP1-201ENST00000261692 H3BS24 57 aa10.14□□□□□ -0.79
CDK2AP1-201ENST00000261692 KRTAP10-5P60370 271 aa10.11□□□□□ -0.79
CDK2AP1-201ENST00000261692 C10orf95Q9H7T3 257 aa10.1□□□□□ -0.79
CDK2AP1-201ENST00000261692 PRO2289Q9P1D8 64 aa10.09□□□□□ -0.79
CDK2AP1-201ENST00000261692 FCGBPQ9Y6R7 5405 aaPredicted RBP10.05□□□□□ -0.8
CDK2AP1-201ENST00000261692 CAMK2N1Q7Z7J9 78 aa10.04□□□□□ -0.8
CDK2AP1-201ENST00000261692 MT1XP80297 61 aa10.01□□□□□ -0.81
CDK2AP1-201ENST00000261692 KRTAP15-1Q3LI76 137 aa9.93□□□□□ -0.82
CDK2AP1-201ENST00000261692 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.91□□□□□ -0.82
CDK2AP1-201ENST00000261692 KRTAP9-7A8MTY7 169 aa9.74□□□□□ -0.85
CDK2AP1-201ENST00000261692 PP632Q6XCG6 107 aa9.73□□□□□ -0.85
CDK2AP1-201ENST00000261692 MACF1Q9UPN3 7388 aaKnown RBP9.71□□□□□ -0.85
CDK2AP1-201ENST00000261692 NDUFAF8A1L188 74 aa9.6□□□□□ -0.87
CDK2AP1-201ENST00000261692 KRTAP10-7P60409 375 aaPredicted RBP9.56□□□□□ -0.88
CDK2AP1-201ENST00000261692 SYNE2Q8WXH0 6885 aaKnown RBP9.55□□□□□ -0.88
CDK2AP1-201ENST00000261692 KRTAP10-12P60413 245 aa9.53□□□□□ -0.88
CDK2AP1-201ENST00000261692 KRTAP23-1A1A580 65 aa9.47□□□□□ -0.89
CDK2AP1-201ENST00000261692 TNP1P09430 55 aa9.45□□□□□ -0.9
CDK2AP1-201ENST00000261692 KMT2DO14686 5537 aa9.4□□□□□ -0.9
CDK2AP1-201ENST00000261692 KRTAP6-3Q3LI67 103 aa9.34□□□□□ -0.91
CDK2AP1-201ENST00000261692 KRTAP4-8A0A0G2JLE6 195 aa9.32□□□□□ -0.92
CDK2AP1-201ENST00000261692 KRTAP4-8Q9BYQ9 185 aa9.32□□□□□ -0.92
CDK2AP1-201ENST00000261692 KRTAP8-1Q8IUC2 63 aa9.3□□□□□ -0.92
CDK2AP1-201ENST00000261692 LUZP6Q538Z0 58 aa9.22□□□□□ -0.93
CDK2AP1-201ENST00000261692 KRTAP5-9P26371 169 aa9.17□□□□□ -0.94
CDK2AP1-201ENST00000261692 LCE3AQ5TA76 89 aa9.09□□□□□ -0.95
CDK2AP1-201ENST00000261692 SPRR2FQ96RM1 72 aa9.08□□□□□ -0.96
CDK2AP1-201ENST00000261692 MUC12Q9UKN1 5478 aa8.99□□□□□ -0.97
CDK2AP1-201ENST00000261692 SPRR5A0A1B0GTR4 108 aa8.95□□□□□ -0.98
CDK2AP1-201ENST00000261692 KRTAP19-7Q3SYF9 63 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms